Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Fur regulog to Edwardsiella tarda EIB202

Reference regulog properties
Source regulog: Fur - Enterobacteriales
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor (activator)
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Edwardsiella tarda EIB202
Orthologous TF(s) ETAE_2610
Regulated genes 19
Built upon 656 sites [see more]
Predicted regulatory interactions in Edwardsiella tarda EIB202
Locus tag Position Score Sequence
Position: -80
Score: 4.9
Sequence: GATAACCATTTTTATTATC
Locus tag: ETAE_0613
ETAE_0613 -80 4.9 GATAACCATTTTTATTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ETAE_0613
Ortholog function: putative hemolysin secretion ATP-binding protein
Edwardsiella tarda EIB202 ETAE_0613 -80 4.7 GATAACCATTTTTATTATC
-74 4.1 CATTTTTATTATCATTTGC
Position: -50
Score: 4.7
Sequence: GATAATAAAAATGGTTATC
Locus tag: ETAE_0614
ETAE_0614 -50 4.7 GATAATAAAAATGGTTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ETAE_0614
Ortholog function: ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component
Edwardsiella tarda EIB202 ETAE_0614 -50 4.7 GATAATAAAAATGGTTATC
Position: 15
Score: 4.5
Sequence: TATTATAAAAATCATTTTT
Position: 21
Score: 4.7
Sequence: AAAAATCATTTTTATTTTT
Locus tag: ETAE_0617
ETAE_0617 15 4.5 TATTATAAAAATCATTTTT
21 4.7 AAAAATCATTTTTATTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fcuA
Ortholog function: TonB-dependent siderophore receptor
Citrobacter koseri ATCC BAA-895 CKO_03725 -192 4.3 GATAATGAGTTTTACTCTC
15 4.1 GCAAAAAATAATTATTCTC
Enterobacter sp. 638 Ent638_1058 -215 4.6 GATAATGAGTATAGTTCTC
-209 4.1 GAGTATAGTTCTCATTCTC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0731 -46 4.6 AATAATGAAAATAATAATC
-40 5.2 GAAAATAATAATCATTATT
-34 5 AATAATCATTATTATTATT
Edwardsiella tarda EIB202 ETAE_0617 15 4.3 TATTATAAAAATCATTTTT
21 4.4 AAAAATCATTTTTATTTTT
Position: -134
Score: 4.6
Sequence: GCAGTTGATAATCATTATC
Locus tag: ETAE_1142
ETAE_1142 -134 4.6 GCAGTTGATAATCATTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: mntH
Ortholog function: Mn2+/Fe2+ transporter, NRAMP family
Escherichia coli str. K-12 substr. MG1655 b2392 -68 4.7 GAATTTGATAATCATTCTC
-62 4.2 GATAATCATTCTCGTTTGG
Salmonella typhimurium LT2 STM2408 -68 4.5 GCACTTGATAATCATTATC
-62 4.8 GATAATCATTATCAATAAA
Citrobacter koseri ATCC BAA-895 CKO_00404 -50 4.3 GCACTTGATAATCATTCTC
-44 4.5 GATAATCATTCTCAATAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02743 -68 4.3 GAACTTGATAATCATTCGC
-62 4.3 GATAATCATTCGCATTTTG
Enterobacter sp. 638 Ent638_2926 -67 4.8 GATCTTGATAATCATTCTC
-61 4.8 GATAATCATTCTCATTTTG
Yersinia pestis KIM y1500 -78 4 GCGCTTGATAATTATTCTC
-72 4.6 GATAATTATTCTCATTTAA
Serratia proteamaculans 568 Spro_3415 -66 4.3 GCACTTGATAATTATTATC
-60 5.2 GATAATTATTATCATTTAC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0843 -63 4.5 GCACTTGATAATCATTATC
-57 5.2 GATAATCATTATCATTTTT
Edwardsiella tarda EIB202 ETAE_1142 -134 4.5 GCAGTTGATAATCATTATC
Position: -61
Score: 5.7
Sequence: GAAAATAATTATCATTATC
Locus tag: ETAE_1481
ETAE_1481 -61 5.7 GAAAATAATTATCATTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ETAE_1481
Ortholog function: TonB-dependent receptor
Edwardsiella tarda EIB202 ETAE_1481 -61 5.4 GAAAATAATTATCATTATC
-55 4.1 AATTATCATTATCAATTAA
Position: -59
Score: 4.6
Sequence: TCGAATGATAACTATTATC
Position: -53
Score: 4.6
Sequence: GATAACTATTATCATTCAA
Locus tag: ETAE_1793
ETAE_1793 -59 4.6 TCGAATGATAACTATTATC
-53 4.6 GATAACTATTATCATTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hemN1
Ortholog function: coproporphyrinogen III oxidase, iron utilization
Citrobacter koseri ATCC BAA-895 CKO_02656 -45 4.2 GCGAATGATAATGATGATC
-39 4.7 GATAATGATGATCATTTAC
Yersinia pestis KIM y0547 -54 4.1 TCGAATGCTTATGATTATC
-48 4.4 GCTTATGATTATCATTTAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3009 -55 4.2 CCAAATAAAAATAATTATC
-49 4.6 AAAAATAATTATCATTTAA
Edwardsiella tarda EIB202 ETAE_1793 -59 4.4 TCGAATGATAACTATTATC
-53 4.4 GATAACTATTATCATTCAA
Position: -4
Score: 5.3
Sequence: GATAATGATTATCATTAAG
Locus tag: ETAE_1796
ETAE_1796 -4 5.3 GATAATGATTATCATTAAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: hemP
Ortholog function: hemin uptake protein
Escherichia coli str. K-12 substr. MG1655 b1705 -47 4.1 AATATTGATAATAAGAATC
-41 4.6 GATAATAAGAATCATTGTT
Salmonella typhimurium LT2 STM1346 -47 4.5 ATTATTGATAATAATAATC
-41 4.7 GATAATAATAATCATTGTG
Citrobacter koseri ATCC BAA-895 CKO_01729 -50 4.7 AATATTGATAATAATAATC
-44 4.9 GATAATAATAATCATTGTT
Citrobacter koseri ATCC BAA-895 CKO_03737 14 4.1 CTTGATGATAATCATTCTT
20 4.8 GATAATCATTCTTGTTATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02163 -10 4.8 ATTATTGATAATGATTATC
-4 5.1 GATAATGATTATCATTGTT
Enterobacter sp. 638 Ent638_1742 -50 4.2 TTTGTTGATAATGATTATC
-44 5.1 GATAATGATTATCATTGTT
Serratia proteamaculans 568 Spro_2170 -68 4 TCACATGATAATGATTCTC
-62 4.6 GATAATGATTCTCACTTTG
Edwardsiella tarda EIB202 ETAE_1796 -10 4.1 TTATACGATAATGATTATC
-4 5.1 GATAATGATTATCATTAAG
Proteus mirabilis HI4320 PMI1424 -52 5.1 GATAACGATAATGATTATC
-46 5.4 GATAATGATTATCATAATC
-40 4.4 GATTATCATAATCATAACC
Photorhabdus luminescens subsp. laumondii TTO1 plu2631 -54 4.7 TATAACGATAATAATTCTC
-48 4.6 GATAATAATTCTCACTATG
Position: -55
Score: 4.3
Sequence: AATAATAAATCTCATTTCT
Locus tag: ETAE_1845
ETAE_1845 -55 4.3 AATAATAAATCTCATTTCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: phsA
Ortholog function: thiosulfate reductase precursor
Edwardsiella tarda EIB202 ETAE_1845 -55 4.1 AATAATAAATCTCATTTCT
Proteus mirabilis HI4320 PMI1814 -191 5 GAAAATAATTATCATTTTA
Position: -75
Score: 4.9
Sequence: GCTAATAATTTTCATTTAC
Position: -53
Score: 4.7
Sequence: AATATTGATATTGATTAGC
Position: -47
Score: 4.8
Sequence: GATATTGATTAGCGTTATC
Locus tag: ETAE_1965
ETAE_1965 -75 4.9 GCTAATAATTTTCATTTAC
-53 4.7 AATATTGATATTGATTAGC
-47 4.8 GATATTGATTAGCGTTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yiuB
Ortholog function: ferric-enterobactin ABC-transporter, permease component
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00519 -54 4.1 GAGAATAATTCTCAGAATC
Enterobacter sp. 638 Ent638_0575 -131 4.4 TCAATTGATAAGCATTATC
Erwinia amylovora ATCC 49946 EAM_2216 -61 4.5 GATAAGTATTATCATTTGC
-10 4 GGTATTGATAATGAGTTTA
Yersinia pestis KIM y2874 -45 4.3 CTTATTGATAAGTATTATC
-39 4.5 GATAAGTATTATCATTTGC
Serratia proteamaculans 568 Spro_3222 -108 4.2 ATGATTGATAAGTATTATC
-102 4.2 GATAAGTATTATCGTTTGC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3242 -77 4.2 ATATACGATAATAATTATC
-71 4.7 GATAATAATTATCAAACTC
Edwardsiella tarda EIB202 ETAE_1965 -75 4.7 GCTAATAATTTTCATTTAC
-53 4.5 AATATTGATATTGATTAGC
-47 4.8 GATATTGATTAGCGTTATC
Proteus mirabilis HI4320 PMI0229 -96 4.8 GATAATGGTAACTATTATC
-90 4.3 GGTAACTATTATCGTTATA
Photorhabdus luminescens subsp. laumondii TTO1 plu2852 -78 4.3 CATATTGATAAGTATTCTC
-72 4 GATAAGTATTCTCATTTGT
Position: -29
Score: 5.3
Sequence: GAAAATCATTACCATTATC
Locus tag: ETAE_1967
ETAE_1967 -29 5.3 GAAAATCATTACCATTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: hpcH
Ortholog function: HpcH/HpaI aldolase family protein
Edwardsiella tarda EIB202 ETAE_1967 -35 4.3 TTGAATGAAAATCATTACC
-29 5.1 GAAAATCATTACCATTATC
-23 4.1 CATTACCATTATCATTAAT
Position: -49
Score: 4.7
Sequence: CATGATGATAATAATTATC
Position: -43
Score: 5.5
Sequence: GATAATAATTATCATTATA
Locus tag: ETAE_2569
ETAE_2569 -49 4.7 CATGATGATAATAATTATC
-43 5.5 GATAATAATTATCATTATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: gpmA
Ortholog function: phosphoglyceromutase 1
Escherichia coli str. K-12 substr. MG1655 b0755 -47 5 TATAATGAGAATTATTATC
-41 4.7 GAGAATTATTATCATTAAA
Salmonella typhimurium LT2 STM0772 -47 5 TATAATGAGAATTATTATC
-41 4.5 GAGAATTATTATCATTACA
Citrobacter koseri ATCC BAA-895 CKO_02381 -46 5 TATAATGAGAATTATTATC
-40 4.5 GAGAATTATTATCATTCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00768 -96 4.6 TATAATGAGAATAGTTATC
Enterobacter sp. 638 Ent638_1246 -164 4.7 TATAATGAGAATTGTTATC
-158 4.1 GAGAATTGTTATCATTCAA
Yersinia pestis KIM y3048 -103 5.3 TATAATGATAATAATTATC
-97 4.6 GATAATAATTATCATTGAA
Serratia proteamaculans 568 Spro_1288 -51 4.9 TATAATGATTTTCGTTATC
Edwardsiella tarda EIB202 ETAE_2569 -49 4.6 CATGATGATAATAATTATC
-43 5.3 GATAATAATTATCATTATA
Position: -193
Score: 4.4
Sequence: TATAATGAATCTCACTATT
Locus tag: ETAE_2610
ETAE_2610 -193 4.4 TATAATGAATCTCACTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fur
Ortholog function: ferric uptake transcription regulator
Escherichia coli str. K-12 substr. MG1655 b0683 -83 4.9 TATAATGATACGCATTATC
Salmonella typhimurium LT2 STM0693 -82 4.9 TATAATGATACGCATTATC
Enterobacter sp. 638 Ent638_1198 -83 4.5 TATAATGAAACGCATTATC
Edwardsiella tarda EIB202 ETAE_2610 -193 4.4 TATAATGAATCTCACTATT
Proteus mirabilis HI4320 PMI0543 -179 4.2 AATATTGAGAATGATAATT
-173 4.5 GAGAATGATAATTATTCAA
Photorhabdus luminescens subsp. laumondii TTO1 plu1327 -106 4.2 GGTTTTCATTTTCATTAGC
Position: -88
Score: 4
Sequence: GAAATTAAAAGTAATTATC
Position: -82
Score: 4.7
Sequence: AAAAGTAATTATCATTTAC
Locus tag: ETAE_2768
ETAE_2768 -88 4 GAAATTAAAAGTAATTATC
-82 4.7 AAAAGTAATTATCATTTAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ETAE_2768
Ortholog function: iron(III) ABC transporter, periplasmic binding protein
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1470 -96 3.9 AAGAGTGATTATCATATAT
Edwardsiella tarda EIB202 ETAE_2768 -82 4.5 AAAAGTAATTATCATTTAC
Position: -291
Score: 4.6
Sequence: ACGAATGATTCTCATTTGC
Position: -163
Score: 4.4
Sequence: GAAAACGATTATCAGTTTT
Position: -157
Score: 4.2
Sequence: GATTATCAGTTTTATTATA
Locus tag: ETAE_3283
ETAE_3283 -291 4.6 ACGAATGATTCTCATTTGC
-163 4.4 GAAAACGATTATCAGTTTT
-157 4.2 GATTATCAGTTTTATTATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: feoA
Ortholog function: ferrous iron transport protein A
Escherichia coli str. K-12 substr. MG1655 b3408 -138 3.4 GcTgATagaAAcCATTcTC
-132 4.5 AGAAACCATTCTCATTATC
Salmonella typhimurium LT2 STM3505 -140 3.5 GAagATagaAAcCATTcTC
-133 4.5 AGAAACCATTCTCATTATC
Citrobacter koseri ATCC BAA-895 CKO_04830 -139 4.1 GATGATAAAAACCATTCTC
-133 4.7 AAAAACCATTCTCATTATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03778 -133 4.1 GATGATAAAAACCATTCTC
-127 4.7 AAAAACCATTCTCATTATC
Enterobacter sp. 638 Ent638_3821 -62 4.5 AGAAACCATTCTCATTATC
Yersinia pestis KIM y3912 -118 4.1 GAGCATGAAAATAATTCTC
-112 4.4 GAAAATAATTCTCAGTATT
Serratia proteamaculans 568 Spro_4628 -155 4.3 GAATACGATAATGATTCTC
-149 4.9 GATAATGATTCTCACTATT
Edwardsiella tarda EIB202 ETAE_3283 -163 4.3 GAAAACGATTATCAGTTTT
-157 4.1 GATTATCAGTTTTATTATA
Proteus mirabilis HI4320 PMI2920 -138 4 AAAGATGGTTATAATTCTC
-132 4.3 GGTTATAATTCTCATTTGC
-59 4.8 GTTAATAATTATCAGTATC
-53 4.6 AATTATCAGTATCATTATT
Photorhabdus luminescens subsp. laumondii TTO1 plu0209 -244 4 AATGTTGGTTATTATTCTC
-238 4.2 GGTTATTATTCTCATTTGC