Propagation of Fur regulog to Edwardsiella tarda EIB202
| Source regulog: | Fur - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | FUR |
| Regulation mode: | repressor (activator) |
| Biological process: | Iron homeostasis |
| Effector: | Iron ion, (Fe2+) |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Edwardsiella tarda EIB202 |
| Orthologous TF(s) | ETAE_2610 |
| Regulated genes | 19 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -80
Score: 4.9 Sequence: GATAACCATTTTTATTATC
Locus tag: ETAE_0613
|
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| ETAE_0613 | -80 | 4.9 | GATAACCATTTTTATTATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ETAE_0613 | ||||
| Ortholog function: putative hemolysin secretion ATP-binding protein | ||||
| Edwardsiella tarda EIB202 | ETAE_0613 | -80 | 4.7 | GATAACCATTTTTATTATC |
| -74 | 4.1 | CATTTTTATTATCATTTGC | ||
|
Position: -50
Score: 4.7 Sequence: GATAATAAAAATGGTTATC
Locus tag: ETAE_0614
|
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| ETAE_0614 | -50 | 4.7 | GATAATAAAAATGGTTATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ETAE_0614 | ||||
| Ortholog function: ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component | ||||
| Edwardsiella tarda EIB202 | ETAE_0614 | -50 | 4.7 | GATAATAAAAATGGTTATC |
|
Position: 15
Score: 4.5 Sequence: TATTATAAAAATCATTTTT
Position: 21
Score: 4.7 Sequence: AAAAATCATTTTTATTTTT
Locus tag: ETAE_0617
|
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| ETAE_0617 | 15 | 4.5 | TATTATAAAAATCATTTTT | |
| 21 | 4.7 | AAAAATCATTTTTATTTTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fcuA | ||||
| Ortholog function: TonB-dependent siderophore receptor | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_03725 | -192 | 4.3 | GATAATGAGTTTTACTCTC |
| 15 | 4.1 | GCAAAAAATAATTATTCTC | ||
| Enterobacter sp. 638 | Ent638_1058 | -215 | 4.6 | GATAATGAGTATAGTTCTC |
| -209 | 4.1 | GAGTATAGTTCTCATTCTC | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0731 | -46 | 4.6 | AATAATGAAAATAATAATC |
| -40 | 5.2 | GAAAATAATAATCATTATT | ||
| -34 | 5 | AATAATCATTATTATTATT | ||
| Edwardsiella tarda EIB202 | ETAE_0617 | 15 | 4.3 | TATTATAAAAATCATTTTT |
| 21 | 4.4 | AAAAATCATTTTTATTTTT | ||
|
Position: -134
Score: 4.6 Sequence: GCAGTTGATAATCATTATC
Locus tag: ETAE_1142
|
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| ETAE_1142 | -134 | 4.6 | GCAGTTGATAATCATTATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: mntH | ||||
| Ortholog function: Mn2+/Fe2+ transporter, NRAMP family | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2392 | -68 | 4.7 | GAATTTGATAATCATTCTC |
| -62 | 4.2 | GATAATCATTCTCGTTTGG | ||
| Salmonella typhimurium LT2 | STM2408 | -68 | 4.5 | GCACTTGATAATCATTATC |
| -62 | 4.8 | GATAATCATTATCAATAAA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_00404 | -50 | 4.3 | GCACTTGATAATCATTCTC |
| -44 | 4.5 | GATAATCATTCTCAATAAA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02743 | -68 | 4.3 | GAACTTGATAATCATTCGC |
| -62 | 4.3 | GATAATCATTCGCATTTTG | ||
| Enterobacter sp. 638 | Ent638_2926 | -67 | 4.8 | GATCTTGATAATCATTCTC |
| -61 | 4.8 | GATAATCATTCTCATTTTG | ||
| Yersinia pestis KIM | y1500 | -78 | 4 | GCGCTTGATAATTATTCTC |
| -72 | 4.6 | GATAATTATTCTCATTTAA | ||
| Serratia proteamaculans 568 | Spro_3415 | -66 | 4.3 | GCACTTGATAATTATTATC |
| -60 | 5.2 | GATAATTATTATCATTTAC | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0843 | -63 | 4.5 | GCACTTGATAATCATTATC |
| -57 | 5.2 | GATAATCATTATCATTTTT | ||
| Edwardsiella tarda EIB202 | ETAE_1142 | -134 | 4.5 | GCAGTTGATAATCATTATC |
|
Position: -61
Score: 5.7 Sequence: GAAAATAATTATCATTATC
Locus tag: ETAE_1481
|
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| ETAE_1481 | -61 | 5.7 | GAAAATAATTATCATTATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ETAE_1481 | ||||
| Ortholog function: TonB-dependent receptor | ||||
| Edwardsiella tarda EIB202 | ETAE_1481 | -61 | 5.4 | GAAAATAATTATCATTATC |
| -55 | 4.1 | AATTATCATTATCAATTAA | ||
|
Position: -59
Score: 4.6 Sequence: TCGAATGATAACTATTATC
Position: -53
Score: 4.6 Sequence: GATAACTATTATCATTCAA
Locus tag: ETAE_1793
|
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| ETAE_1793 | -59 | 4.6 | TCGAATGATAACTATTATC | |
| -53 | 4.6 | GATAACTATTATCATTCAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hemN1 | ||||
| Ortholog function: coproporphyrinogen III oxidase, iron utilization | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_02656 | -45 | 4.2 | GCGAATGATAATGATGATC |
| -39 | 4.7 | GATAATGATGATCATTTAC | ||
| Yersinia pestis KIM | y0547 | -54 | 4.1 | TCGAATGCTTATGATTATC |
| -48 | 4.4 | GCTTATGATTATCATTTAA | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3009 | -55 | 4.2 | CCAAATAAAAATAATTATC |
| -49 | 4.6 | AAAAATAATTATCATTTAA | ||
| Edwardsiella tarda EIB202 | ETAE_1793 | -59 | 4.4 | TCGAATGATAACTATTATC |
| -53 | 4.4 | GATAACTATTATCATTCAA | ||
|
Position: -4
Score: 5.3 Sequence: GATAATGATTATCATTAAG
Locus tag: ETAE_1796
|
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| ETAE_1796 | -4 | 5.3 | GATAATGATTATCATTAAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hemP | ||||
| Ortholog function: hemin uptake protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1705 | -47 | 4.1 | AATATTGATAATAAGAATC |
| -41 | 4.6 | GATAATAAGAATCATTGTT | ||
| Salmonella typhimurium LT2 | STM1346 | -47 | 4.5 | ATTATTGATAATAATAATC |
| -41 | 4.7 | GATAATAATAATCATTGTG | ||
| Citrobacter koseri ATCC BAA-895 | CKO_01729 | -50 | 4.7 | AATATTGATAATAATAATC |
| -44 | 4.9 | GATAATAATAATCATTGTT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03737 | 14 | 4.1 | CTTGATGATAATCATTCTT |
| 20 | 4.8 | GATAATCATTCTTGTTATC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02163 | -10 | 4.8 | ATTATTGATAATGATTATC |
| -4 | 5.1 | GATAATGATTATCATTGTT | ||
| Enterobacter sp. 638 | Ent638_1742 | -50 | 4.2 | TTTGTTGATAATGATTATC |
| -44 | 5.1 | GATAATGATTATCATTGTT | ||
| Serratia proteamaculans 568 | Spro_2170 | -68 | 4 | TCACATGATAATGATTCTC |
| -62 | 4.6 | GATAATGATTCTCACTTTG | ||
| Edwardsiella tarda EIB202 | ETAE_1796 | -10 | 4.1 | TTATACGATAATGATTATC |
| -4 | 5.1 | GATAATGATTATCATTAAG | ||
| Proteus mirabilis HI4320 | PMI1424 | -52 | 5.1 | GATAACGATAATGATTATC |
| -46 | 5.4 | GATAATGATTATCATAATC | ||
| -40 | 4.4 | GATTATCATAATCATAACC | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2631 | -54 | 4.7 | TATAACGATAATAATTCTC |
| -48 | 4.6 | GATAATAATTCTCACTATG | ||
|
Position: -55
Score: 4.3 Sequence: AATAATAAATCTCATTTCT
Locus tag: ETAE_1845
|
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| ETAE_1845 | -55 | 4.3 | AATAATAAATCTCATTTCT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: phsA | ||||
| Ortholog function: thiosulfate reductase precursor | ||||
| Edwardsiella tarda EIB202 | ETAE_1845 | -55 | 4.1 | AATAATAAATCTCATTTCT |
| Proteus mirabilis HI4320 | PMI1814 | -191 | 5 | GAAAATAATTATCATTTTA |
|
Position: -75
Score: 4.9 Sequence: GCTAATAATTTTCATTTAC
Position: -53
Score: 4.7 Sequence: AATATTGATATTGATTAGC
Position: -47
Score: 4.8 Sequence: GATATTGATTAGCGTTATC
Locus tag: ETAE_1965
|
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| ETAE_1965 | -75 | 4.9 | GCTAATAATTTTCATTTAC | |
| -53 | 4.7 | AATATTGATATTGATTAGC | ||
| -47 | 4.8 | GATATTGATTAGCGTTATC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yiuB | ||||
| Ortholog function: ferric-enterobactin ABC-transporter, permease component | ||||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00519 | -54 | 4.1 | GAGAATAATTCTCAGAATC |
| Enterobacter sp. 638 | Ent638_0575 | -131 | 4.4 | TCAATTGATAAGCATTATC |
| Erwinia amylovora ATCC 49946 | EAM_2216 | -61 | 4.5 | GATAAGTATTATCATTTGC |
| -10 | 4 | GGTATTGATAATGAGTTTA | ||
| Yersinia pestis KIM | y2874 | -45 | 4.3 | CTTATTGATAAGTATTATC |
| -39 | 4.5 | GATAAGTATTATCATTTGC | ||
| Serratia proteamaculans 568 | Spro_3222 | -108 | 4.2 | ATGATTGATAAGTATTATC |
| -102 | 4.2 | GATAAGTATTATCGTTTGC | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3242 | -77 | 4.2 | ATATACGATAATAATTATC |
| -71 | 4.7 | GATAATAATTATCAAACTC | ||
| Edwardsiella tarda EIB202 | ETAE_1965 | -75 | 4.7 | GCTAATAATTTTCATTTAC |
| -53 | 4.5 | AATATTGATATTGATTAGC | ||
| -47 | 4.8 | GATATTGATTAGCGTTATC | ||
| Proteus mirabilis HI4320 | PMI0229 | -96 | 4.8 | GATAATGGTAACTATTATC |
| -90 | 4.3 | GGTAACTATTATCGTTATA | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2852 | -78 | 4.3 | CATATTGATAAGTATTCTC |
| -72 | 4 | GATAAGTATTCTCATTTGT | ||
|
Position: -29
Score: 5.3 Sequence: GAAAATCATTACCATTATC
Locus tag: ETAE_1967
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| ETAE_1967 | -29 | 5.3 | GAAAATCATTACCATTATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hpcH | ||||
| Ortholog function: HpcH/HpaI aldolase family protein | ||||
| Edwardsiella tarda EIB202 | ETAE_1967 | -35 | 4.3 | TTGAATGAAAATCATTACC |
| -29 | 5.1 | GAAAATCATTACCATTATC | ||
| -23 | 4.1 | CATTACCATTATCATTAAT | ||
|
Position: -49
Score: 4.7 Sequence: CATGATGATAATAATTATC
Position: -43
Score: 5.5 Sequence: GATAATAATTATCATTATA
Locus tag: ETAE_2569
|
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| ETAE_2569 | -49 | 4.7 | CATGATGATAATAATTATC | |
| -43 | 5.5 | GATAATAATTATCATTATA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gpmA | ||||
| Ortholog function: phosphoglyceromutase 1 | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0755 | -47 | 5 | TATAATGAGAATTATTATC |
| -41 | 4.7 | GAGAATTATTATCATTAAA | ||
| Salmonella typhimurium LT2 | STM0772 | -47 | 5 | TATAATGAGAATTATTATC |
| -41 | 4.5 | GAGAATTATTATCATTACA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_02381 | -46 | 5 | TATAATGAGAATTATTATC |
| -40 | 4.5 | GAGAATTATTATCATTCAA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00768 | -96 | 4.6 | TATAATGAGAATAGTTATC |
| Enterobacter sp. 638 | Ent638_1246 | -164 | 4.7 | TATAATGAGAATTGTTATC |
| -158 | 4.1 | GAGAATTGTTATCATTCAA | ||
| Yersinia pestis KIM | y3048 | -103 | 5.3 | TATAATGATAATAATTATC |
| -97 | 4.6 | GATAATAATTATCATTGAA | ||
| Serratia proteamaculans 568 | Spro_1288 | -51 | 4.9 | TATAATGATTTTCGTTATC |
| Edwardsiella tarda EIB202 | ETAE_2569 | -49 | 4.6 | CATGATGATAATAATTATC |
| -43 | 5.3 | GATAATAATTATCATTATA | ||
|
Position: -193
Score: 4.4 Sequence: TATAATGAATCTCACTATT
Locus tag: ETAE_2610
|
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| ETAE_2610 | -193 | 4.4 | TATAATGAATCTCACTATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fur | ||||
| Ortholog function: ferric uptake transcription regulator | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0683 | -83 | 4.9 | TATAATGATACGCATTATC |
| Salmonella typhimurium LT2 | STM0693 | -82 | 4.9 | TATAATGATACGCATTATC |
| Enterobacter sp. 638 | Ent638_1198 | -83 | 4.5 | TATAATGAAACGCATTATC |
| Edwardsiella tarda EIB202 | ETAE_2610 | -193 | 4.4 | TATAATGAATCTCACTATT |
| Proteus mirabilis HI4320 | PMI0543 | -179 | 4.2 | AATATTGAGAATGATAATT |
| -173 | 4.5 | GAGAATGATAATTATTCAA | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu1327 | -106 | 4.2 | GGTTTTCATTTTCATTAGC |
|
Position: -88
Score: 4 Sequence: GAAATTAAAAGTAATTATC
Position: -82
Score: 4.7 Sequence: AAAAGTAATTATCATTTAC
Locus tag: ETAE_2768
|
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| ETAE_2768 | -88 | 4 | GAAATTAAAAGTAATTATC | |
| -82 | 4.7 | AAAAGTAATTATCATTTAC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ETAE_2768 | ||||
| Ortholog function: iron(III) ABC transporter, periplasmic binding protein | ||||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1470 | -96 | 3.9 | AAGAGTGATTATCATATAT |
| Edwardsiella tarda EIB202 | ETAE_2768 | -82 | 4.5 | AAAAGTAATTATCATTTAC |
|
Position: -291
Score: 4.6 Sequence: ACGAATGATTCTCATTTGC
Position: -163
Score: 4.4 Sequence: GAAAACGATTATCAGTTTT
Position: -157
Score: 4.2 Sequence: GATTATCAGTTTTATTATA
Locus tag: ETAE_3283
|
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| ETAE_3283 | -291 | 4.6 | ACGAATGATTCTCATTTGC | |
| -163 | 4.4 | GAAAACGATTATCAGTTTT | ||
| -157 | 4.2 | GATTATCAGTTTTATTATA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: feoA | ||||
| Ortholog function: ferrous iron transport protein A | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3408 | -138 | 3.4 | GcTgATagaAAcCATTcTC |
| -132 | 4.5 | AGAAACCATTCTCATTATC | ||
| Salmonella typhimurium LT2 | STM3505 | -140 | 3.5 | GAagATagaAAcCATTcTC |
| -133 | 4.5 | AGAAACCATTCTCATTATC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_04830 | -139 | 4.1 | GATGATAAAAACCATTCTC |
| -133 | 4.7 | AAAAACCATTCTCATTATC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03778 | -133 | 4.1 | GATGATAAAAACCATTCTC |
| -127 | 4.7 | AAAAACCATTCTCATTATC | ||
| Enterobacter sp. 638 | Ent638_3821 | -62 | 4.5 | AGAAACCATTCTCATTATC |
| Yersinia pestis KIM | y3912 | -118 | 4.1 | GAGCATGAAAATAATTCTC |
| -112 | 4.4 | GAAAATAATTCTCAGTATT | ||
| Serratia proteamaculans 568 | Spro_4628 | -155 | 4.3 | GAATACGATAATGATTCTC |
| -149 | 4.9 | GATAATGATTCTCACTATT | ||
| Edwardsiella tarda EIB202 | ETAE_3283 | -163 | 4.3 | GAAAACGATTATCAGTTTT |
| -157 | 4.1 | GATTATCAGTTTTATTATA | ||
| Proteus mirabilis HI4320 | PMI2920 | -138 | 4 | AAAGATGGTTATAATTCTC |
| -132 | 4.3 | GGTTATAATTCTCATTTGC | ||
| -59 | 4.8 | GTTAATAATTATCAGTATC | ||
| -53 | 4.6 | AATTATCAGTATCATTATT | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0209 | -244 | 4 | AATGTTGGTTATTATTCTC |
| -238 | 4.2 | GGTTATTATTCTCATTTGC | ||