Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Fur regulog to Proteus mirabilis HI4320

Reference regulog properties
Source regulog: Fur - Enterobacteriales
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor (activator)
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Proteus mirabilis HI4320
Orthologous TF(s) PMI0543
Regulated genes 49
Built upon 656 sites [see more]
Predicted regulatory interactions in Proteus mirabilis HI4320
Locus tag Position Score Sequence
Position: -170
Score: 5
Sequence: AGTAATGATAATTACTATC
Locus tag: PMI0029
PMI0029 -170 5 AGTAATGATAATTACTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: exbB
Ortholog function: TonB-dependent siderophore transporter component ExbB
Escherichia coli str. K-12 substr. MG1655 b3006 -82 4.1 AGTAATGAGAACGACTATC
Salmonella typhimurium LT2 STM3159 -82 4.1 AGTAATGAGAACGACTATC
Citrobacter koseri ATCC BAA-895 CKO_04401 -97 4.1 AGTAATGAGAACGACTATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03426 -97 4.3 ACTAATGAGAACCACTATC
Enterobacter sp. 638 Ent638_3417 -97 4.3 ACTAATGAGAACCACTATC
Yersinia pestis KIM y3495 -71 4.8 ACTAATGATAATTACTATC
Serratia proteamaculans 568 Spro_4211 -94 4.4 AATAATGAGAACTACTATC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0358 -206 4.3 AATAATGAGAACGACTATC
Proteus mirabilis HI4320 PMI0029 -170 4.8 AGTAATGATAATTACTATC
Photorhabdus luminescens subsp. laumondii TTO1 plu3941 -98 5.1 AATAATGATAATTACTATC
Position: -300
Score: 4.3
Sequence: ACTAACGATAATTAATTTT
Position: -294
Score: 4.1
Sequence: GATAATTAATTTTATTTCT
Locus tag: PMI0070
PMI0070 -300 4.3 ACTAACGATAATTAATTTT
-294 4.1 GATAATTAATTTTATTTCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ydhY
Ortholog function: oxidoreductase, Fe-S subunit
Escherichia coli str. K-12 substr. MG1655 b1674 -267 4.5 TCAAATGATAATAAATATC
Citrobacter koseri ATCC BAA-895 CKO_01699 -215 4.4 CTAAATGATAATAAATATC
Proteus mirabilis HI4320 PMI0070 -300 4.1 ACTAACGATAATTAATTTT
Position: -41
Score: 4.8
Sequence: AAGAATAATAACAATTATC
Position: -35
Score: 4.6
Sequence: AATAACAATTATCATTCAA
Locus tag: PMI0176
PMI0176 -41 4.8 AAGAATAATAACAATTATC
-35 4.6 AATAACAATTATCATTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: CKO_02056
Ortholog function: periplasmic protein involved in Fe2+ uptake
Citrobacter koseri ATCC BAA-895 CKO_02056 -98 5.3 TATAATGATAATAATTATC
-92 5 GATAATAATTATCATTTGT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1511 -41 4.7 GATAATAAGAATAAATATC
-35 4.2 AAGAATAAATATCATTTGT
Proteus mirabilis HI4320 PMI0176 -41 4.6 AAGAATAATAACAATTATC
-35 4.3 AATAACAATTATCATTCAA
Position: -301
Score: 4.1
Sequence: TAAAAATAGTATCATTAAC
Position: -96
Score: 5
Sequence: GATAATGGTAACTATTATC
Position: -90
Score: 4.3
Sequence: GGTAACTATTATCGTTATA
Position: -72
Score: 4.1
Sequence: AGTTTTAATTCGCATTATC
Locus tag: PMI0229
PMI0229 -301 4.1 TAAAAATAGTATCATTAAC
-96 5 GATAATGGTAACTATTATC
-90 4.3 GGTAACTATTATCGTTATA
-72 4.1 AGTTTTAATTCGCATTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yiuB
Ortholog function: ferric-enterobactin ABC-transporter, permease component
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00519 -54 4.1 GAGAATAATTCTCAGAATC
Enterobacter sp. 638 Ent638_0575 -131 4.4 TCAATTGATAAGCATTATC
Erwinia amylovora ATCC 49946 EAM_2216 -61 4.5 GATAAGTATTATCATTTGC
-10 4 GGTATTGATAATGAGTTTA
Yersinia pestis KIM y2874 -45 4.3 CTTATTGATAAGTATTATC
-39 4.5 GATAAGTATTATCATTTGC
Serratia proteamaculans 568 Spro_3222 -108 4.2 ATGATTGATAAGTATTATC
-102 4.2 GATAAGTATTATCGTTTGC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3242 -77 4.2 ATATACGATAATAATTATC
-71 4.7 GATAATAATTATCAAACTC
Edwardsiella tarda EIB202 ETAE_1965 -75 4.7 GCTAATAATTTTCATTTAC
-53 4.5 AATATTGATATTGATTAGC
-47 4.8 GATATTGATTAGCGTTATC
Proteus mirabilis HI4320 PMI0229 -96 4.8 GATAATGGTAACTATTATC
-90 4.3 GGTAACTATTATCGTTATA
Photorhabdus luminescens subsp. laumondii TTO1 plu2852 -78 4.3 CATATTGATAAGTATTCTC
-72 4 GATAAGTATTCTCATTTGT
Position: -80
Score: 4.9
Sequence: GTAAATAATAATCAATCTC
Position: -74
Score: 4.8
Sequence: AATAATCAATCTCATTCTC
Locus tag: PMI0231
PMI0231 -80 4.9 GTAAATAATAATCAATCTC
-74 4.8 AATAATCAATCTCATTCTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ECA4117
Ortholog function: citrate lyase beta chain
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4117 -88 4.1 GTAAATAGGTATCATTCTT
Proteus mirabilis HI4320 PMI0231 -80 4.7 GTAAATAATAATCAATCTC
-74 4.6 AATAATCAATCTCATTCTC
Position: -158
Score: 4.5
Sequence: GAGAATGAGATTGATTATT
Position: -152
Score: 4.9
Sequence: GAGATTGATTATTATTTAC
Locus tag: PMI0232
PMI0232 -158 4.5 GAGAATGAGATTGATTATT
-152 4.9 GAGATTGATTATTATTTAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ECA4116
Ortholog function: siderophore biosynthesis protein, IucA / IucC family
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4116 -181 4.2 AAGAATGATACCTATTTAC
Proteus mirabilis HI4320 PMI0232 -158 4.4 GAGAATGAGATTGATTATT
-152 4.7 GAGATTGATTATTATTTAC
Position: -103
Score: 5
Sequence: TAGAATAATAATAATTATC
Position: -100
Score: 4.5
Sequence: AATAATAATAATTATCATT
Position: -97
Score: 5.3
Sequence: AATAATAATTATCATTAGT
Position: -91
Score: 4.3
Sequence: AATTATCATTAGTATTAAT
Locus tag: PMI0363
PMI0363 -103 5 TAGAATAATAATAATTATC
-100 4.5 AATAATAATAATTATCATT
-97 5.3 AATAATAATTATCATTAGT
-91 4.3 AATTATCATTAGTATTAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: CKO_02589
Ortholog function: TonB-dependent siderophore receptor
Citrobacter koseri ATCC BAA-895 CKO_02589 -114 4.2 GCAAATGGTAATGATTTGC
-108 4.3 GGTAATGATTTGCAATAAC
Enterobacter sp. 638 Ent638_1079 -109 4.3 GGGAATGATTTGCAATATC
Proteus mirabilis HI4320 PMI0363 -103 4.9 TAGAATAATAATAATTATC
-97 5 AATAATAATTATCATTAGT
Position: 2
Score: 5.7
Sequence: GATAATAATTATCATTAAC
Locus tag: PMI0409
PMI0409 2 5.7 GATAATAATTATCATTAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: hemR
Ortholog function: TonB-edependent hemin receptor
Proteus mirabilis HI4320 PMI0409 -4 5.1 TGTAATGATAATAATTATC
2 5.4 GATAATAATTATCATTAAC
Position: -179
Score: 4.2
Sequence: AATATTGAGAATGATAATT
Position: -173
Score: 4.7
Sequence: GAGAATGATAATTATTCAA
Locus tag: PMI0543
PMI0543 -179 4.2 AATATTGAGAATGATAATT
-173 4.7 GAGAATGATAATTATTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fur
Ortholog function: ferric uptake transcription regulator
Escherichia coli str. K-12 substr. MG1655 b0683 -83 4.9 TATAATGATACGCATTATC
Salmonella typhimurium LT2 STM0693 -82 4.9 TATAATGATACGCATTATC
Enterobacter sp. 638 Ent638_1198 -83 4.5 TATAATGAAACGCATTATC
Edwardsiella tarda EIB202 ETAE_2610 -193 4.4 TATAATGAATCTCACTATT
Proteus mirabilis HI4320 PMI0543 -179 4.2 AATATTGAGAATGATAATT
-173 4.5 GAGAATGATAATTATTCAA
Photorhabdus luminescens subsp. laumondii TTO1 plu1327 -106 4.2 GGTTTTCATTTTCATTAGC
Position: -299
Score: 3.6
Sequence: AAAAATGAATTTATTTAGT
Position: -280
Score: 4.1
Sequence: TTTAATAAAATTTATTTTT
Position: -213
Score: 3.4
Sequence: TGTAATTAATATTTATTTT
Position: -212
Score: 4
Sequence: GTAATTAATATTTATTTTG
Position: -184
Score: 4.9
Sequence: GTTAATGATAATCAATTCC
Position: -178
Score: 4.3
Sequence: GATAATCAATTCCATTAAT
Position: -168
Score: 3.8
Sequence: TCCATTAATTATTATTTGT
Position: -165
Score: 3.6
Sequence: ATTAATTATTATTTGTTTT
Position: -137
Score: 3.7
Sequence: ATAAATGAGATTGGTTTTT
Position: -131
Score: 4.2
Sequence: GAGATTGGTTTTTATTTTT
Position: -125
Score: 4.2
Sequence: GGTTTTTATTTTTATTCTC
Position: -80
Score: 3.5
Sequence: TATATTTAAATTTACTATA
Position: -40
Score: 3.4
Sequence: AATATCCATAATGTTAATT
Locus tag: PMI1007
PMI1007 -299 3.6 AAAAATGAATTTATTTAGT
-280 4.1 TTTAATAAAATTTATTTTT
-213 3.4 TGTAATTAATATTTATTTT
-212 4 GTAATTAATATTTATTTTG
-184 4.9 GTTAATGATAATCAATTCC
-178 4.3 GATAATCAATTCCATTAAT
-168 3.8 TCCATTAATTATTATTTGT
-165 3.6 ATTAATTATTATTTGTTTT
-137 3.7 ATAAATGAGATTGGTTTTT
-131 4.2 GAGATTGGTTTTTATTTTT
-125 4.2 GGTTTTTATTTTTATTCTC
-80 3.5 TATATTTAAATTTACTATA
-40 3.4 AATATCCATAATGTTAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ftnA
Ortholog function: ferritin
Escherichia coli str. K-12 substr. MG1655 b1905 -127 3.4 GgTAATGcgttTtATTccC
-121 3 GcgttTtATtccCATTcgt
Salmonella typhimurium LT2 STM1935 -100 4 AATAATTAAATTTAATATT
Citrobacter koseri ATCC BAA-895 CKO_01042 -97 4.3 AATAATTAAATTTATTATT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02402 -161 4 ATAAATTAAAAGCATTCTC
-155 3.8 TAAAAGCATTCTCATTTAT
Enterobacter sp. 638 Ent638_2486 -103 3.7 TATTTTAATAAATAATATC
-97 3.6 AATAAATAATATCTTTATT
Erwinia amylovora ATCC 49946 EAM_2940 -131 4.4 TGGAATGATTATCAATTAC
Yersinia pestis KIM y2524 -93 4.4 AATAATGTGAATGATTATC
-87 4.1 GTGAATGATTATCATGATG
Serratia proteamaculans 568 Spro_1942 -174 4.5 GAAAATAGTTATCATAATT
-168 4 AGTTATCATAATTATTTAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2473 -158 4.6 TTAAATGATAATGAATATC
-152 4.8 GATAATGAATATCAATAGC
Proteus mirabilis HI4320 PMI1007 -184 4.7 GTTAATGATAATCAATTCC
-178 4.1 GATAATCAATTCCATTAAT
Photorhabdus luminescens subsp. laumondii TTO1 plu2689 -147 4.4 TTAAATGAGATTCATTTTC
-141 4.4 GAGATTCATTTTCATTTTT
Position: -63
Score: 4.2
Sequence: TGAAATGATATTGATAATC
Position: -57
Score: 5.7
Sequence: GATATTGATAATCATTATC
Position: -51
Score: 4.3
Sequence: GATAATCATTATCAGTTAG
Locus tag: PMI1027
PMI1027 -63 4.2 TGAAATGATATTGATAATC
-57 5.7 GATATTGATAATCATTATC
-51 4.3 GATAATCATTATCAGTTAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: sitA
Ortholog function: iron ABC transporter, periplasmic substrate-binding protein
Salmonella typhimurium LT2 STM2861 -99 4.5 GCAAATAAGAATTATTTTC
-93 4.2 AAGAATTATTTTCATTTAT
Citrobacter koseri ATCC BAA-895 CKO_04090 -84 4.5 GTAAATAAGAATTATTTTC
-78 4.2 AAGAATTATTTTCATTTAT
Citrobacter koseri ATCC BAA-895 CKO_00940 -111 4.1 GATAAAGATAATTTTTCTC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03078 -99 4.5 GCAAATAAGAATTATTTTC
-93 4.2 AAGAATTATTTTCATTTAT
Enterobacter sp. 638 Ent638_1111 -98 4.9 TTTAATGATAATTATTTTC
-92 4.5 GATAATTATTTTCATTTAA
Yersinia pestis KIM y1897 -39 5.2 GGTATTGATAATCATTTTC
-33 4.7 GATAATCATTTTCATTTGT
Serratia proteamaculans 568 Spro_2133 -41 5.4 GATATTGATAATCATTTTC
-35 4.6 GATAATCATTTTCATTTGA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2392 -53 5.1 GATATTGATAATTATTCTC
Proteus mirabilis HI4320 PMI1027 -63 4.2 TGAAATGATATTGATAATC
-57 5.5 GATATTGATAATCATTATC
Photorhabdus luminescens subsp. laumondii TTO1 plu2672 -49 5.2 GATATTGATAATCGTTATC
-43 4.5 GATAATCGTTATCATATAC
Position: -131
Score: 4.9
Sequence: GATAATCTTTATCATTAGC
Locus tag: PMI1378
PMI1378 -131 4.9 GATAATCTTTATCATTAGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: sapA
Ortholog function: ABC peptide transport periplasmic protein
Erwinia amylovora ATCC 49946 EAM_1842 -198 5.1 GTTAATAATAATCATTCTC
-192 5.2 AATAATCATTCTCATTATC
Edwardsiella tarda EIB202 ETAE_1870 -222 4.1 TTGAATGATAATGTTTATC
-216 4.8 GATAATGTTTATCAATATC
Proteus mirabilis HI4320 PMI1378 -131 4.7 GATAATCTTTATCATTAGC
Photorhabdus luminescens subsp. laumondii TTO1 plu2587 -141 4 ACAGATGATAATGGTTATC
-135 4.3 GATAATGGTTATCAATACG
Position: -66
Score: 4.5
Sequence: GATAAGGGTTATCATTACC
Locus tag: PMI1416
PMI1416 -66 4.5 GATAAGGGTTATCATTACC
Supported by regulated orthologs from reference regulons
Ortholog gene name: sufA
Ortholog function: scaffold protein for iron-sulfur cluster assembly
Escherichia coli str. K-12 substr. MG1655 b1684 -65 4.4 TGAACTGATAATCATTATC
-59 5.1 GATAATCATTATCACTAAC
Salmonella typhimurium LT2 STM1369 -66 4.7 TGAAGTGATAATCATTATC
-60 5.1 GATAATCATTATCACTAAC
Citrobacter koseri ATCC BAA-895 CKO_01717 -66 4.7 TGAAGTGATAATCATTATC
-60 5.1 GATAATCATTATCACTAAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02141 -66 4.7 TGAAGTGATAATCATTATC
-60 5.1 GATAATCATTATCACTAAC
Enterobacter sp. 638 Ent638_1760 -67 4.4 TGAAGTGATAATCGTTATC
-61 4.7 GATAATCGTTATCACTAAC
Yersinia pestis KIM y1934 -129 4.5 TGAAGTGATAATTATTATC
-123 4.8 GATAATTATTATCACTACC
Serratia proteamaculans 568 Spro_2179 -77 4.4 TGAAGTGATAATCGTTATC
-71 4.7 GATAATCGTTATCACTAAC
Proteus mirabilis HI4320 PMI1416 -66 4.4 GATAAGGGTTATCATTACC
-60 4 GGTTATCATTACCATTAGA
Photorhabdus luminescens subsp. laumondii TTO1 plu2622 -87 4.4 GATAAAGGTTATCATTACC
-81 4.3 GGTTATCATTACCATTATA
Position: -52
Score: 5.3
Sequence: GATAACGATAATGATTATC
Position: -46
Score: 5.5
Sequence: GATAATGATTATCATAATC
Position: -40
Score: 4.6
Sequence: GATTATCATAATCATAACC
Locus tag: PMI1424
PMI1424 -52 5.3 GATAACGATAATGATTATC
-46 5.5 GATAATGATTATCATAATC
-40 4.6 GATTATCATAATCATAACC
Supported by regulated orthologs from reference regulons
Ortholog gene name: hemP
Ortholog function: hemin uptake protein
Escherichia coli str. K-12 substr. MG1655 b1705 -47 4.1 AATATTGATAATAAGAATC
-41 4.6 GATAATAAGAATCATTGTT
Salmonella typhimurium LT2 STM1346 -47 4.5 ATTATTGATAATAATAATC
-41 4.7 GATAATAATAATCATTGTG
Citrobacter koseri ATCC BAA-895 CKO_01729 -50 4.7 AATATTGATAATAATAATC
-44 4.9 GATAATAATAATCATTGTT
Citrobacter koseri ATCC BAA-895 CKO_03737 14 4.1 CTTGATGATAATCATTCTT
20 4.8 GATAATCATTCTTGTTATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02163 -10 4.8 ATTATTGATAATGATTATC
-4 5.1 GATAATGATTATCATTGTT
Enterobacter sp. 638 Ent638_1742 -50 4.2 TTTGTTGATAATGATTATC
-44 5.1 GATAATGATTATCATTGTT
Serratia proteamaculans 568 Spro_2170 -68 4 TCACATGATAATGATTCTC
-62 4.6 GATAATGATTCTCACTTTG
Edwardsiella tarda EIB202 ETAE_1796 -10 4.1 TTATACGATAATGATTATC
-4 5.1 GATAATGATTATCATTAAG
Proteus mirabilis HI4320 PMI1424 -52 5.1 GATAACGATAATGATTATC
-46 5.4 GATAATGATTATCATAATC
-40 4.4 GATTATCATAATCATAACC
Photorhabdus luminescens subsp. laumondii TTO1 plu2631 -54 4.7 TATAACGATAATAATTCTC
-48 4.6 GATAATAATTCTCACTATG
Position: -66
Score: 4.6
Sequence: AATAGTGATAATGACTATC
Position: -60
Score: 5.2
Sequence: GATAATGACTATCATTATT
Locus tag: PMI1437
PMI1437 -66 4.6 AATAGTGATAATGACTATC
-60 5.2 GATAATGACTATCATTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: viuB
Ortholog function: FAD-binding 9 siderophore-interacting domain protein
Serratia proteamaculans 568 Spro_2919 -65 4.5 GCAAACAATTCTCATTATC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2023 -72 4.4 CGAAATGATAATAGTTATC
Proteus mirabilis HI4320 PMI1437 -66 4.6 AATAGTGATAATGACTATC
-60 5 GATAATGACTATCATTATT
Photorhabdus luminescens subsp. laumondii TTO1 plu2040 -97 5 TTTAATGATAATAATTATC
-91 5.5 GATAATAATTATCATTTTC
Position: -300
Score: 4.8
Sequence: GTAATTAATTATCATTACC
Position: -294
Score: 4.3
Sequence: AATTATCATTACCATTTAA
Locus tag: PMI1486
PMI1486 -300 4.8 GTAATTAATTATCATTACC
-294 4.3 AATTATCATTACCATTTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: adhE
Ortholog function: iron-containing aldehyde-alcohol dehydrogenase
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02199 -332 4 TTTAATGCTAATCGTTTTT
-326 3.2 GCTAATCGTTTTTTTAATT
Yersinia pestis KIM y2023 -339 5 GATAATGACAATCATTCTC
-333 3.7 GAcAATcATtcTCAaaAaa
Serratia proteamaculans 568 Spro_2704 -330 3.9 GTTATCAAGAATGATTCTC
-324 4.2 AAGAATGATTCTCAAAAAC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2326 -368 4.5 CCTAATGATATTGATTATC
-362 5.2 GATATTGATTATCAATATC
Edwardsiella tarda EIB202 ETAE_1508 -317 4 aAagATGAgAtTCATTcTC
-311 4.3 GAgAtTcATtcTCATTAaa
Proteus mirabilis HI4320 PMI1486 -300 4.5 GTAATTAATTATCATTACC
-294 4 AATTATCATTACCATTTAA
Photorhabdus luminescens subsp. laumondii TTO1 plu2496 -191 3.9 ccaAtcaATAATaATTATC
-185 4.4 AATAATAATTATCACTGAC
Position: -75
Score: 5.1
Sequence: GATATTGATAATTATTCTT
Position: -69
Score: 4.8
Sequence: GATAATTATTCTTATTAAT
Locus tag: PMI1551
PMI1551 -75 5.1 GATATTGATAATTATTCTT
-69 4.8 GATAATTATTCTTATTAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cjrA
Ortholog function: putative lipoprotein of unknown function DUF399
Citrobacter koseri ATCC BAA-895 CKO_00039 -104 4.6 GATAATGAGTTTCATTCGC
Serratia proteamaculans 568 Spro_3469 -51 5.1 GCAAATGATAATTATTATC
-45 4.2 GATAATTATTATCTATAAT
Proteus mirabilis HI4320 PMI1551 -75 4.8 GATATTGATAATTATTCTT
-69 4.6 GATAATTATTCTTATTAAT
Photorhabdus luminescens subsp. laumondii TTO1 plu2718 -45 4.5 GTAAACGATTCTTATTATC
Position: -191
Score: 5.2
Sequence: GAAAATAATTATCATTTTA
Locus tag: PMI1814
PMI1814 -191 5.2 GAAAATAATTATCATTTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: phsA
Ortholog function: thiosulfate reductase precursor
Edwardsiella tarda EIB202 ETAE_1845 -55 4.1 AATAATAAATCTCATTTCT
Proteus mirabilis HI4320 PMI1814 -191 5 GAAAATAATTATCATTTTA
Position: -220
Score: 4.8
Sequence: GATAATTATACTCATTAAA
Position: -199
Score: 4.6
Sequence: AGTAATATTAATAATTATC
Position: -193
Score: 4.5
Sequence: ATTAATAATTATCTTTCTT
Locus tag: PMI1869
PMI1869 -220 4.8 GATAATTATACTCATTAAA
-199 4.6 AGTAATATTAATAATTATC
-193 4.5 ATTAATAATTATCTTTCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ECA0816
Ortholog function: putative membrane protein
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0816 -49 4.4 ATTAATGATAATGAAAATC
-43 4.5 GATAATGAAAATCATTTCA
Proteus mirabilis HI4320 PMI1869 -220 4.7 GATAATTATACTCATTAAA
-199 4.3 AGTAATATTAATAATTATC
-193 4.1 ATTAATAATTATCTTTCTT
Photorhabdus luminescens subsp. laumondii TTO1 plu2637 -125 4.7 ATAATTGATAATTATTATC
-119 4.9 GATAATTATTATCATTTAT
Position: -55
Score: 5
Sequence: GATAATATTAATCATTCTC
Locus tag: PMI1945
PMI1945 -55 5 GATAATATTAATCATTCTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ireA
Ortholog function: TonB-dependent ferric siderophore receptor
Proteus mirabilis HI4320 PMI1945 -55 4.8 GATAATATTAATCATTCTC
-49 4.3 ATTAATCATTCTCATTACT
Position: -149
Score: 4.6
Sequence: AATAATGATAAACACTATT
Position: -84
Score: 4.5
Sequence: AATAATGAAACCTATTTTC
Locus tag: PMI2204
PMI2204 -149 4.6 AATAATGATAAACACTATT
-84 4.5 AATAATGAAACCTATTTTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: PMI2204
Ortholog function: pirin-like protein
Proteus mirabilis HI4320 PMI2204 -149 4.5 AATAATGATAAACACTATT
-84 4.3 AATAATGAAACCTATTTTC
Position: -27
Score: 5.5
Sequence: AATAATGAAAATCATTATC
Position: -21
Score: 5.4
Sequence: GAAAATCATTATCATTAAC
Locus tag: PMI2497
PMI2497 -27 5.5 AATAATGAAAATCATTATC
-21 5.4 GAAAATCATTATCATTAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yjjZ
Ortholog function: putative membrane protein
Escherichia coli str. K-12 substr. MG1655 b4567 -60 4.4 GCAAATGATAAAAATTATC
-37 5.2 GATATTGGTTATCATTATC
Salmonella typhimurium LT2 STM4552 -37 5.2 GATATTGGTTATCATTATC
-31 4.2 GGTTATCATTATCAATTCC
Citrobacter koseri ATCC BAA-895 CKO_03427 2 4.9 GCTATTGGTTATCATTATC
8 4.1 GGTTATCATTATCGGTATC
Enterobacter sp. 638 Ent638_0529 -37 5.2 GATATTGGTTATCATTATC
-31 4 GGTTATCATTATCATATTG
Erwinia amylovora ATCC 49946 EAM_0565 -70 4.3 CAAAGTGATAATGATTAAC
-64 4.3 GATAATGATTAACATATGC
-47 4.9 GCTATTGGTAATCATTATC
-41 4.8 GGTAATCATTATCATTTAT
Yersinia pestis KIM y3754 -4 4.9 GATATTGGTTATGATTATC
2 5.2 GGTTATGATTATCATTATC
Serratia proteamaculans 568 Spro_0646 -39 4.7 GATATTAGTTCTCATTATC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0738 -89 5 GATATTAGTTATCATTATC
-83 4.5 AGTTATCATTATCATTTTT
Proteus mirabilis HI4320 PMI2497 -27 5.3 AATAATGAAAATCATTATC
-21 5.2 GAAAATCATTATCATTAAC
Photorhabdus luminescens subsp. laumondii TTO1 plu4253 -92 5.2 GATATTGGTAATCATTATC
-86 4.7 GGTAATCATTATCATTTGT
Position: -75
Score: 4.4
Sequence: TGAATTGATAACAATTATC
Position: -69
Score: 4.9
Sequence: GATAACAATTATCATTACT
Locus tag: PMI2503
PMI2503 -75 4.4 TGAATTGATAACAATTATC
-69 4.9 GATAACAATTATCATTACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: CKO_02588
Ortholog function: putative enterochelin esterase
Enterobacter sp. 638 Ent638_1080 -59 4.1 GCAAATCATTCCCATTTGC
Proteus mirabilis HI4320 PMI2503 -75 4.2 TGAATTGATAACAATTATC
-69 4.6 GATAACAATTATCATTACT
Photorhabdus luminescens subsp. laumondii TTO1 plu4257 -42 4.1 AATAATAGTAATTGTTCTT
-36 4.1 AGTAATTGTTCTTATTATT
Position: -64
Score: 4.4
Sequence: GCAAATGATATTAATTCGC
Position: -58
Score: 4.6
Sequence: GATATTAATTCGCATTAAC
Locus tag: PMI2596
PMI2596 -64 4.4 GCAAATGATATTAATTCGC
-58 4.6 GATATTAATTCGCATTAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fyuA
Ortholog function: TonB-dependent siderophore receptor
Citrobacter koseri ATCC BAA-895 CKO_00905 -74 4.6 AGAAATAGTTATCATTTTC
Citrobacter koseri ATCC BAA-895 CKO_01243 -74 4.6 AGAAATAGTTATCATTTTC
Yersinia pestis KIM y2404 -74 4.6 AGAAATAGTTATCATTTTC
Proteus mirabilis HI4320 PMI2596 -64 4.2 GCAAATGATATTAATTCGC
-58 4.4 GATATTAATTCGCATTAAC
Photorhabdus luminescens subsp. laumondii TTO1 plu2316 -160 5.1 ATTAATGAGAATCATTATC
-154 4.6 GAGAATCATTATCAATAGT
Position: -217
Score: 4.2
Sequence: GTTAATGCGAATTAATATC
Position: -211
Score: 4.4
Sequence: GCGAATTAATATCATTTGC
Locus tag: PMI2597
PMI2597 -217 4.2 GTTAATGCGAATTAATATC
-211 4.4 GCGAATTAATATCATTTGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ybtX
Ortholog function: MFS siderophore permease, RhtX/FptX family
Proteus mirabilis HI4320 PMI2597 -217 4.1 GTTAATGCGAATTAATATC
-211 4.2 GCGAATTAATATCATTTGC
Proteus mirabilis HI4320 PMI2597 -217 4.1 GTTAATGCGAATTAATATC
-211 4.2 GCGAATTAATATCATTTGC
Position: -42
Score: 4.6
Sequence: AATAACGATTATTAATATA
Locus tag: PMI2675
PMI2675 -42 4.6 AATAACGATTATTAATATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: CKO_01208
Ortholog function: iron compound ABC transporter, periplasmic protein
Proteus mirabilis HI4320 PMI2675 -42 4.4 AATAACGATTATTAATATA
Position: -138
Score: 4.2
Sequence: AAAGATGGTTATAATTCTC
Position: -132
Score: 4.6
Sequence: GGTTATAATTCTCATTTGC
Position: -59
Score: 5
Sequence: GTTAATAATTATCAGTATC
Position: -53
Score: 4.8
Sequence: AATTATCAGTATCATTATT
Locus tag: PMI2920
PMI2920 -138 4.2 AAAGATGGTTATAATTCTC
-132 4.6 GGTTATAATTCTCATTTGC
-59 5 GTTAATAATTATCAGTATC
-53 4.8 AATTATCAGTATCATTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: feoA
Ortholog function: ferrous iron transport protein A
Escherichia coli str. K-12 substr. MG1655 b3408 -138 3.4 GcTgATagaAAcCATTcTC
-132 4.5 AGAAACCATTCTCATTATC
Salmonella typhimurium LT2 STM3505 -140 3.5 GAagATagaAAcCATTcTC
-133 4.5 AGAAACCATTCTCATTATC
Citrobacter koseri ATCC BAA-895 CKO_04830 -139 4.1 GATGATAAAAACCATTCTC
-133 4.7 AAAAACCATTCTCATTATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03778 -133 4.1 GATGATAAAAACCATTCTC
-127 4.7 AAAAACCATTCTCATTATC
Enterobacter sp. 638 Ent638_3821 -62 4.5 AGAAACCATTCTCATTATC
Yersinia pestis KIM y3912 -118 4.1 GAGCATGAAAATAATTCTC
-112 4.4 GAAAATAATTCTCAGTATT
Serratia proteamaculans 568 Spro_4628 -155 4.3 GAATACGATAATGATTCTC
-149 4.9 GATAATGATTCTCACTATT
Edwardsiella tarda EIB202 ETAE_3283 -163 4.3 GAAAACGATTATCAGTTTT
-157 4.1 GATTATCAGTTTTATTATA
Proteus mirabilis HI4320 PMI2920 -138 4 AAAGATGGTTATAATTCTC
-132 4.3 GGTTATAATTCTCATTTGC
-59 4.8 GTTAATAATTATCAGTATC
-53 4.6 AATTATCAGTATCATTATT
Photorhabdus luminescens subsp. laumondii TTO1 plu0209 -244 4 AATGTTGGTTATTATTCTC
-238 4.2 GGTTATTATTCTCATTTGC
Position: -121
Score: 4.2
Sequence: GTGAATTAGTATCATTACT
Locus tag: PMI2957
PMI2957 -121 4.2 GTGAATTAGTATCATTACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fatB
Ortholog function: iron ABC transporter, substrate-binding protein
Yersinia pestis KIM y4043 -26 4.8 GGTAATAAAAATCATTAGC
-20 4.2 AAAAATCATTAGCATTACT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2564 -86 4.2 GCGAATGATAATTAAATTC
-80 4.1 GATAATTAAATTCTTTATT
Proteus mirabilis HI4320 PMI2957 -121 4.1 GTGAATTAGTATCATTACT
Position: -95
Score: 4.8
Sequence: GGATATGATAATGATTTTC
Position: -89
Score: 5.5
Sequence: GATAATGATTTTCATTAAC
Position: -83
Score: 4.2
Sequence: GATTTTCATTAACATTTTT
Locus tag: PMI3036
PMI3036 -95 4.8 GGATATGATAATGATTTTC
-89 5.5 GATAATGATTTTCATTAAC
-83 4.2 GATTTTCATTAACATTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sodA
Ortholog function: manganese/iron superoxide dismutase
Escherichia coli str. K-12 substr. MG1655 b3908 -99 4.7 GGCATTGATAATCATTTTC
-93 5 GATAATCATTTTCAATATC
Salmonella typhimurium LT2 STM4055 -99 4.7 GGCATTGATAATCATTTTC
-93 5 GATAATCATTTTCAATATC
Citrobacter koseri ATCC BAA-895 CKO_03093 -88 4.3 GGCATTGATAAGCATTTTC
-82 4.4 GATAAGCATTTTCAATATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04217 -88 4.3 GGCATTGATAAGCATTTTC
-82 4 GATAAGCATTTTCAATACC
Enterobacter sp. 638 Ent638_4063 -100 4.7 GGCATTGATAATCATTTTC
-94 5 GATAATCATTTTCAATATC
Yersinia pestis KIM y4080 -104 4.4 AGGTTTGATAATCATTTTC
-98 5 GATAATCATTTTCAATATC
Serratia proteamaculans 568 Spro_0081 -105 4.7 GGCATTGATAATCATTTTC
-99 5 GATAATCATTTTCAATATC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0092 -105 4.9 AATAATCATTTTCAATATC
Proteus mirabilis HI4320 PMI3036 -95 4.6 GGATATGATAATGATTTTC
-89 5.2 GATAATGATTTTCATTAAC
Photorhabdus luminescens subsp. laumondii TTO1 plu0075 -102 4.3 GGTATTGATAAGCATTTCC
Position: -57
Score: 4.3
Sequence: TGAAATAACAATGATTATC
Position: -51
Score: 5.1
Sequence: AACAATGATTATCATTTAC
Locus tag: PMI3252
PMI3252 -57 4.3 TGAAATAACAATGATTATC
-51 5.1 AACAATGATTATCATTTAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: bfd
Ortholog function: bacterioferritin-associated ferredoxin
Escherichia coli str. K-12 substr. MG1655 b3337 -51 3.9 tgaAATaAgAActATTtTC
-45 3.9 aAgAActATttTCATTtat
Salmonella typhimurium LT2 STM3444 -55 4.6 TGTAATCATAACCATTCTC
-49 4.3 CATAACCATTCTCATTTAC
Citrobacter koseri ATCC BAA-895 CKO_04744 -55 4.3 TGTAATCATAACTATTCTC
-49 4.2 CATAACTATTCTCATTTAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03723 -55 4.6 TGTAATCATAACCATTCTC
-49 3.9 cATAAccATtcTCATTtaa
Enterobacter sp. 638 Ent638_3755 -55 4.7 TGTAATCATAATTATTCTC
-49 4.2 CATAATTATTCTCACTTAC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4034 -132 3.9 tgaAATaAaAATaATTcTt
-126 4.4 AAAAATAATTCTTATTTAC
Proteus mirabilis HI4320 PMI3252 -57 4.2 TGAAATAACAATGATTATC
-51 4.8 AACAATGATTATCATTTAC
Photorhabdus luminescens subsp. laumondii TTO1 plu4729 -59 4.4 TGAAATGAGACTCATTATT
-53 3.6 GAgAcTcATtATtATTtaa
Position: -95
Score: 4.2
Sequence: TCAAATGCGAATCATTTTC
Position: -89
Score: 3.9
Sequence: GCGAATCATTTTCAAAAAC
Position: -47
Score: 4.1
Sequence: TTTTATGATTAGTATTCTT
Locus tag: PMI3448
PMI3448 -95 4.2 TCAAATGCGAATCATTTTC
-89 3.9 GCGAATCATTTTCAAAAAC
-47 4.1 TTTTATGATTAGTATTCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: plu3625
Ortholog function: lipoprotein
Serratia proteamaculans 568 Spro_1844 -114 4.1 CTAAACAATAACCATTATC
-108 4.6 AATAACCATTATCATTTCC
Proteus mirabilis HI4320 PMI3448 -95 4 TCAAATGCGAATCATTTTC
Position: -115
Score: 4.5
Sequence: GATATTGCTTATTATTAAT
Position: -75
Score: 4.3
Sequence: AATATTGATTATAAAAATT
Locus tag: PMI3708
PMI3708 -115 4.5 GATATTGCTTATTATTAAT
-75 4.3 AATATTGATTATAAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: PMI3708
Ortholog function: ECF-family sigma factor
Proteus mirabilis HI4320 PMI3708 -115 4.2 GATATTGCTTATTATTAAT
-75 4.2 AATATTGATTATAAAAATT
Position: -115
Score: 4.4
Sequence: AATTTTTATAATCAATATT
Position: -75
Score: 4.7
Sequence: ATTAATAATAAGCAATATC
Locus tag: PMI3709
PMI3709 -115 4.4 AATTTTTATAATCAATATT
-75 4.7 ATTAATAATAAGCAATATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: PMI3709
Ortholog function: TonB-like protein
Proteus mirabilis HI4320 PMI3709 -115 4.3 AATTTTTATAATCAATATT
-75 4.5 ATTAATAATAAGCAATATC