Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of CodY regulog to Streptococcus agalactiae NEM316

Reference regulog properties
Source regulog: CodY - Streptococcaceae
Regulator type: Transcription factor
Regulator family: CodY
Regulation mode: repressor (activator)
Biological process: Amino acid metabolism
Effector: Guanosine triphosphate; Branched-chain amino acids
Phylum: Firmicutes
Propagated regulon:
Target genome Streptococcus agalactiae NEM316
Orthologous TF(s) gbs1719
Regulated genes 21
Built upon 273 sites [see more]
Predicted regulatory interactions in Streptococcus agalactiae NEM316
Locus tag Position Score Sequence
Position: -100
Score: 5.2
Sequence: AATTTTCTGAAAATC
Locus tag: gbs0054
gbs0054 -100 5.2 AATTTTCTGAAAATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: adhB1
Ortholog function: Alcohol dehydrogenase (EC 1.1.1.1)
Streptococcus agalactiae 2603V/R SAG0054 -100 5.2 AATTTTCTGAAAATC
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_0062 -113 5.2 AATTTTCAGAAAACT
Streptococcus gordonii str. Challis substr. CH1 SGO_0565 -282 5.4 AATTGTCTGAAAATT
Streptococcus suis 05ZYH33 SSU05_0279 -173 5.1 ATTTTTTTGAAAATT
Position: -93
Score: 5.6
Sequence: AATTATCTGAAAATT
Locus tag: gbs0144
gbs0144 -93 5.6 AATTATCTGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: oppA1
Ortholog function: Oligopeptide ABC transporter, substrate-binding protein (TC 3.A.1.5.1)
Streptococcus agalactiae 2603V/R SAG0148 -93 5.6 AATTATCTGAAAATT
Position: -128
Score: 5.2
Sequence: AACTTTCTGAAAATT
Locus tag: gbs0156
gbs0156 -128 5.2 AACTTTCTGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: rpoB
Ortholog function: DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)
Streptococcus agalactiae 2603V/R SAG0160 -128 5.2 AACTTTCTGAAAATT
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_0131 -91 4.6 AAGATTCTAAAAATT
Streptococcus gallolyticus UCN34 GALLO_0084 -165 4.6 AAGATTCTAAAAATT
Streptococcus gordonii str. Challis substr. CH1 SGO_1927 -222 5.4 ATTTTTCTGAAAATT
Streptococcus mitis B6 smi_1847 -113 5 AAGATTCTGAAAATT
Streptococcus mutans UA159 SMU.1990 -84 5.3 AAAATTCTGAAAATT
Streptococcus pneumoniae TIGR4 SP_1961 -112 5 AAGATTCTGAAAATT
Streptococcus pyogenes M1 GAS SPy0098 -91 5.2 AATATTCTAAAAATT
Streptococcus suis 05ZYH33 SSU05_0121 -276 4.6 AAGATTCTAAAAATT
Streptococcus thermophilus CNRZ1066 str1868 -171 4.6 AAAGTTCTAAAAATT
Streptococcus uberis 0140J SUB0115 -90 4.6 AAGATTCTAAAAATT
Position: -48
Score: 4.8
Sequence: AATATTCAGAATGTT
Locus tag: gbs0287
gbs0287 -48 4.8 AATATTCAGAATGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: pepC
Ortholog function: Aminopeptidase C (EC 3.4.22.40)
Lactococcus lactis subsp. cremoris SK11 LACR_2073 -125 4.8 ATTTTTTTGATAATT
Lactococcus lactis subsp. lactis Il1403 L130687 -125 4.8 ATTTTTTTGATAATT
Streptococcus agalactiae 2603V/R SAG0297 -48 4.8 AATATTCAGAATGTT
Streptococcus gallolyticus UCN34 GALLO_0478 -125 4.7 AAATGTCAGAATTTT
Streptococcus thermophilus CNRZ1066 str0229 -57 5.1 AATTTTCAGAAATTA
Position: -52
Score: 4.9
Sequence: AATTTTCTGACTTTT
Locus tag: gbs0327
gbs0327 -52 4.9 AATTTTCTGACTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: thrA
Ortholog function: Aspartokinase (EC 2.7.2.4)
Lactococcus lactis subsp. cremoris SK11 LACR_0783 -71 5.6 AATTATCTGAAAATT
Lactococcus lactis subsp. lactis Il1403 L0097 -70 5.6 AATTATCTGAAAATT
Streptococcus agalactiae 2603V/R SAG0339 -52 4.9 AATTTTCTGACTTTT
Streptococcus gallolyticus UCN34 GALLO_0331 -52 5.3 AATTTTCAGAATTTT
Streptococcus gordonii str. Challis substr. CH1 SGO_1701 -38 4.5 AATTGTTTGAATAAT
Streptococcus mutans UA159 SMU.1748 -53 5.3 AATTTTCTGAATTTT
Streptococcus sanguinis SK36 SSA_1943 -47 5.3 AATTTTCAGAATTTT
Streptococcus suis 05ZYH33 SSU05_1811 -123 4.6 GTTTTTCTGAAATTT
Streptococcus thermophilus CNRZ1066 str0378 -56 5.1 AATTATCAGAATTTT
Streptococcus uberis 0140J SUB0316 -26 5 AATATTCATAAAATT
Position: -96
Score: 4.6
Sequence: AATATTCTGAATTTA
Locus tag: gbs0691
gbs0691 -96 4.6 AATATTCTGAATTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: gluQ
Ortholog function: Glutamate ABC transporter, ATP-binding protein
Streptococcus agalactiae 2603V/R SAG0718 -96 4.6 AATATTCTGAATTTA
Streptococcus gallolyticus UCN34 GALLO_1555 -114 5.1 AATTTTCTGAATATA
Streptococcus mutans UA159 SMU.1519 -101 5.1 AATTTTCTGATAATA
Position: -127
Score: 5.1
Sequence: AATTTTCAGATTTTT
Locus tag: gbs0779
gbs0779 -127 5.1 AATTTTCAGATTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: pepF
Ortholog function: Oligoendopeptidase F
Streptococcus agalactiae 2603V/R SAG0758 -127 5.1 AATTTTCAGATTTTT
Streptococcus gallolyticus UCN34 GALLO_1516 -220 5.1 AATTTTCTGATTTTT
Streptococcus gordonii str. Challis substr. CH1 SGO_0342 22 4.5 AATTTCCAGAAAATG
Streptococcus sanguinis SK36 SSA_2051 22 4.5 AATTTCCAGAAAATG
Streptococcus uberis 0140J SUB0601 -154 4.8 CTTTTTCTGAAAATT
Position: -96
Score: 5.1
Sequence: AAAAATCTGAAAATT
Locus tag: gbs0780
gbs0780 -96 5.1 AAAAATCTGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ppc
Ortholog function: Phosphoenolpyruvate carboxylase (EC 4.1.1.31)
Streptococcus agalactiae 2603V/R SAG0759 -96 5.1 AAAAATCTGAAAATT
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_0621 -167 4.5 CATTTTCAGGAAATT
Streptococcus gallolyticus UCN34 GALLO_1515 -132 5.1 AAAAATCAGAAAATT
Streptococcus thermophilus CNRZ1066 str0718 -108 4.9 AAAAGTCAGAAAATT
Streptococcus uberis 0140J SUB0602 -55 4.8 AATTTTCAGAAAAAG
Position: -72
Score: 4.6
Sequence: ATATGTCAGATAATT
Locus tag: gbs0841
gbs0841 -72 4.6 ATATGTCAGATAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gapN
Ortholog function: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (NADP) (EC 1.2.1.9)
Streptococcus agalactiae 2603V/R SAG0823 -72 4.6 ATATGTCAGATAATT
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_1419 -87 4.9 AATTTTCTGATACTT
Streptococcus equi subsp. zooepidemicus MGCS10565 Sez_0766 -87 4.6 AATTTTCAGACTCTT
Streptococcus gallolyticus UCN34 GALLO_0746 -87 5.3 AATTTTCTGAATTTT
Streptococcus mutans UA159 SMU.676 -89 5.3 AATTTTCTGAATTTT
Streptococcus pneumoniae TIGR4 SP_1119 -55 5.2 GATTTTCTGAAAATT
Streptococcus pyogenes M1 GAS SPy1371 -87 5.3 AATTTTCAGATATTT
Streptococcus sanguinis SK36 SSA_0774 -53 5.8 AATTTTCAGAAAATT
Streptococcus thermophilus CNRZ1066 str1263 -89 5 AATTTTCTGAATACT
Streptococcus uberis 0140J SUB1220 -87 5.4 AATTTTCAGACAATT
Position: -177
Score: 4.7
Sequence: AATATTCTGCTAATT
Locus tag: gbs1045
gbs1045 -177 4.7 AATATTCTGCTAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fatD
Ortholog function: Iron-siderophore ABC transporter, permease protein 1
Streptococcus agalactiae 2603V/R SAG1010 -177 4.7 AATATTCTGCTAATT
Streptococcus gallolyticus UCN34 GALLO_0871 -109 5.8 AATTTTCAGAAAATT
Streptococcus pneumoniae TIGR4 SP_1869 -80 5.2 AATTGTCAGAAATTT
Position: -83
Score: 5
Sequence: ATTTTTCTGAATTTT
Locus tag: gbs1227
gbs1227 -83 5 ATTTTTCTGAATTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ilvE
Ortholog function: Branched-chain amino acid aminotransferase (EC 2.6.1.42)
Lactococcus lactis subsp. cremoris SK11 LACR_1409 -97 4.8 AATTGTTTGAAATTT
Streptococcus agalactiae 2603V/R SAG1152 -83 4.7 ATTTATCTGAATTTT
Streptococcus gallolyticus UCN34 GALLO_0979 -84 5.3 AATTTTCAGAATTTT
Streptococcus gordonii str. Challis substr. CH1 SGO_1238 -99 5.8 AATTTTCTGAAAATT
Streptococcus mitis B6 smi_0906 -88 5.8 AATTTTCTGAAAATT
Streptococcus mutans UA159 SMU.1203 -83 5.3 AATTTTCAGAATTTT
Streptococcus pneumoniae TIGR4 SP_0856 -88 5.8 AATTTTCTGAAAATT
Streptococcus pyogenes M1 GAS SPy0911 -102 4.6 AATTTTATGATAAAT
Streptococcus sanguinis SK36 SSA_1225 -98 5.8 AATTTTCTGAAAATT
Streptococcus thermophilus CNRZ1066 str0590 -90 4.9 AATTGTCAGAATTTT
Streptococcus uberis 0140J SUB1010 -88 4.8 AATATTCCGAATATT
Position: -55
Score: 4.9
Sequence: AAAATTCTGACAATT
Locus tag: gbs1405
gbs1405 -55 4.9 AAAATTCTGACAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gdhA
Ortholog function: NADP-specific glutamate dehydrogenase (EC 1.4.1.4)
Streptococcus agalactiae 2603V/R SAG1335 -55 4.9 AAAATTCTGACAATT
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_0823 -61 5.3 AAAATTCAGAAAATT
Streptococcus equi subsp. zooepidemicus MGCS10565 Sez_1090 -65 5.3 AAAATTCAGAAAATT
Streptococcus gallolyticus UCN34 GALLO_1293 -78 5.8 AATTTTCAGAAAATT
Streptococcus gordonii str. Challis substr. CH1 SGO_0276 -95 5.8 AATTTTCAGAAAATT
Streptococcus mitis B6 smi_0814 -95 5.5 AATTTTTAGAAAATT
Streptococcus mutans UA159 SMU.913 -68 5.6 AATATTCAGAAAATT
Streptococcus pneumoniae TIGR4 SP_1306 -94 5.5 AATTTTTAGAAAATT
Streptococcus sanguinis SK36 SSA_0371 -182 5.5 AATTTTTAGAAAATT
Streptococcus suis 05ZYH33 SSU05_0252 -45 5.1 AATTGTCAGACAATT
Streptococcus thermophilus CNRZ1066 str0430 -52 5 AAGATTCTGAAAATT
Streptococcus uberis 0140J SUB0762 -60 5.6 AATATTCTGAAAATT
Position: -89
Score: 5.1
Sequence: AATTTTCAAAAAAAT
Position: -56
Score: 5.3
Sequence: AATATTCTGATAATT
Locus tag: gbs1632
gbs1632 -89 5.1 AATTTTCAAAAAAAT
-56 5.3 AATATTCTGATAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: livK
Ortholog function: Branched-chain amino acids ABC transporter, substrate-binding protein (TC 3.A.1.4.1)
Streptococcus agalactiae 2603V/R SAG1582 -56 5.3 AATATTCTGATAATT
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_0443 -98 4.9 ATTTTTCAAAATATT
-65 5.6 AATTTTCTGATAATT
Streptococcus gallolyticus UCN34 GALLO_1760 -66 5.6 AATTTTCTGATAATT
Streptococcus gordonii str. Challis substr. CH1 SGO_1630 -66 5.6 AATTTTCTGATAATT
Streptococcus mitis B6 smi_1415 -61 5.6 AATTTTCTGATAATT
Streptococcus mutans UA159 SMU.1669 -66 5.3 AATATTCAGATAATT
Streptococcus pneumoniae TIGR4 SP_0749 -60 5.6 AATTTTCTGATAATT
Streptococcus sanguinis SK36 SSA_1729 -65 5.2 AATTGTCAGATAATT
Streptococcus suis 05ZYH33 SSU05_1548 -64 5.6 AATTTTCAGATAATT
Streptococcus thermophilus CNRZ1066 str0359 -65 5.6 AATTTTCTGATAATT
Streptococcus uberis 0140J SUB0432 -66 5.6 AATTTTCTGATAATT
Position: -46
Score: 5
Sequence: AATTTTGAGAATATT
Locus tag: gbs1720
gbs1720 -46 5 AATTTTGAGAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: alaT
Ortholog function: Aspartate aminotransferase (EC 2.6.1.1)
Streptococcus agalactiae 2603V/R SAG1676 -46 5 AATTTTGAGAATATT
Position: -115
Score: 5.6
Sequence: AATTTTCTGAATATT
Locus tag: gbs2002
gbs2002 -115 5.6 AATTTTCTGAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gldA2
Ortholog function: Glycerol dehydrogenase (EC 1.1.1.6)
Streptococcus agalactiae 2603V/R SAG2046 -115 5.6 AATTTTCTGAATATT
Streptococcus mutans UA159 SMU.1309c -154 5 AATCTTCTGAATATT
Position: -310
Score: 5
Sequence: AATTTTCAGTATATT
Position: -85
Score: 5.3
Sequence: AAAATTCAGAAAATT
Locus tag: gbs2008
gbs2008 -310 5 AATTTTCAGTATATT
-85 5.3 AAAATTCAGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: scpC
Ortholog function: Serine endopeptidase ScpC (EC 3.4.21.-)
Streptococcus agalactiae 2603V/R SAG2053 -85 5.3 AAAATTCAGAAAATT
Streptococcus gallolyticus UCN34 GALLO_0748 -100 5 AATTTTCAGAAAAAA
Streptococcus suis 05ZYH33 SSU05_0812 -146 5.1 AATTTTCAGAATATA
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