Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of TreR (RgrA) regulog to Lactococcus lactis subsp. lactis KF147

Reference regulog properties
Source regulog: TreR (RgrA) - Streptococcaceae
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process: Trehalose utilization
Effector: Trehalose-6-phosphate
Phylum: Firmicutes
Propagated regulon:
Target genome Lactococcus lactis subsp. lactis KF147
Orthologous TF(s) LLKF_0478
Regulated genes 2
Built upon 4 sites [see more]
Predicted regulatory interactions in Lactococcus lactis subsp. lactis KF147
Locus tag Position Score Sequence
Position: -93
Score: 7.4
Sequence: TGAAGTTGTACGTACAAGTTAA
Locus tag: LLKF_0478
LLKF_0478 -93 7.4 TGAAGTTGTACGTACAAGTTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: treR
Ortholog function: Trehalose utilization transcriptional regulator RgrA, GntR family
Lactococcus lactis subsp. cremoris SK11 LACR_0480 -108 7.2 TGCAGTTGTACGTACAAGTTAA
Lactococcus lactis subsp. lactis Il1403 L0150 -93 7.4 TGAAGTTGTACGTACAAGTTAA
Position: -39
Score: 7.4
Sequence: TTAACTTGTACGTACAACTTCA
Locus tag: LLKF_0479
LLKF_0479 -39 7.4 TTAACTTGTACGTACAACTTCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: treP
Ortholog function: Trehalose-specific PTS, IIBC component (EC 2.7.1.69)
Lactococcus lactis subsp. cremoris SK11 LACR_0481 -39 7.2 TTAACTTGTACGTACAACTGCA
Lactococcus lactis subsp. cremoris SK11 LACR_0482 -39 7.2 TTAACTTGTACGTACAACTGCA
Lactococcus lactis subsp. lactis Il1403 L37338 -39 7.4 TTAACTTGTACGTACAACTTCA
Lactococcus lactis subsp. lactis Il1403 L37906 -39 7.4 TTAACTTGTACGTACAACTTCA
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