Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of CodY regulog to Streptococcus sanguinis SK36

Reference regulog properties
Source regulog: CodY - Streptococcaceae
Regulator type: Transcription factor
Regulator family: CodY
Regulation mode: repressor (activator)
Biological process: Amino acid metabolism
Effector: Guanosine triphosphate; Branched-chain amino acids
Phylum: Firmicutes
Propagated regulon:
Target genome Streptococcus sanguinis SK36
Orthologous TF(s) SSA_0566
Regulated genes 21
Built upon 273 sites [see more]
Predicted regulatory interactions in Streptococcus sanguinis SK36
Locus tag Position Score Sequence
Position: -57
Score: 5.2
Sequence: AATTTTCTGATAAAT
Locus tag: SSA_0095
SSA_0095 -57 5.2 AATTTTCTGATAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: thrC
Ortholog function: Threonine synthase (EC 4.2.3.1)
Streptococcus agalactiae 2603V/R SAG0055 -100 5.2 AATTTTCTGAAAATC
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_0063 -113 5.2 AATTTTCAGAAAACT
Streptococcus gallolyticus UCN34 GALLO_0042 -61 5.6 AATTTTCTGATAATT
Streptococcus gordonii str. Challis substr. CH1 SGO_0139 -57 5.2 AATTTTCTGATAAAT
Streptococcus mitis B6 smi_0193 -57 5.4 AATTTTCTGAAAAAT
Streptococcus mutans UA159 SMU.70 -59 5.2 AATTGTCTGATAATT
Streptococcus pneumoniae TIGR4 SP_2066 -57 5.4 AATTTTCTGAAAAAT
Streptococcus sanguinis SK36 SSA_0095 -57 5.2 AATTTTCTGATAAAT
Streptococcus suis 05ZYH33 SSU05_0281 -56 4.8 AATTTTCTGTCAATT
Streptococcus thermophilus CNRZ1066 str1878 -59 5.4 AATTTTCTGACAATT
Position: -64
Score: 5
Sequence: AATTGTCTGAAAATA
Locus tag: SSA_0321
SSA_0321 -64 5 AATTGTCTGAAAATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ubiE
Ortholog function: SAM-dependent methyltransferase
Streptococcus gordonii str. Challis substr. CH1 SGO_0226 -60 5.2 AAATGTCAGAAAATT
Streptococcus mitis B6 smi_1568 -56 4.7 AATTGTCAGATAATA
Streptococcus mutans UA159 SMU.1301c -65 5.1 TATTTTCAGAATATT
Streptococcus pneumoniae TIGR4 SP_1578 -55 4.7 AATTGTCAGATAATA
Streptococcus sanguinis SK36 SSA_0321 -64 5 AATTGTCTGAAAATA
Position: -290
Score: 4.7
Sequence: AATTTTCATAAAATA
Locus tag: SSA_0363
SSA_0363 -290 4.7 AATTTTCATAAAATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: dagA
Ortholog function: Sodium/glycine symporter
Streptococcus mutans UA159 SMU.1175 -291 4.7 AATTTTCAGAAAAGA
Streptococcus sanguinis SK36 SSA_0363 -290 4.7 AATTTTCATAAAATA
Position: -182
Score: 5.5
Sequence: AATTTTTAGAAAATT
Locus tag: SSA_0371
SSA_0371 -182 5.5 AATTTTTAGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gdhA
Ortholog function: NADP-specific glutamate dehydrogenase (EC 1.4.1.4)
Streptococcus agalactiae 2603V/R SAG1335 -55 4.9 AAAATTCTGACAATT
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_0823 -61 5.3 AAAATTCAGAAAATT
Streptococcus equi subsp. zooepidemicus MGCS10565 Sez_1090 -65 5.3 AAAATTCAGAAAATT
Streptococcus gallolyticus UCN34 GALLO_1293 -78 5.8 AATTTTCAGAAAATT
Streptococcus gordonii str. Challis substr. CH1 SGO_0276 -95 5.8 AATTTTCAGAAAATT
Streptococcus mitis B6 smi_0814 -95 5.5 AATTTTTAGAAAATT
Streptococcus mutans UA159 SMU.913 -68 5.6 AATATTCAGAAAATT
Streptococcus pneumoniae TIGR4 SP_1306 -94 5.5 AATTTTTAGAAAATT
Streptococcus sanguinis SK36 SSA_0371 -182 5.5 AATTTTTAGAAAATT
Streptococcus suis 05ZYH33 SSU05_0252 -45 5.1 AATTGTCAGACAATT
Streptococcus thermophilus CNRZ1066 str0430 -52 5 AAGATTCTGAAAATT
Streptococcus uberis 0140J SUB0762 -60 5.6 AATATTCTGAAAATT
Position: -71
Score: 5.6
Sequence: AATTTTCAGATAATT
Locus tag: SSA_0566
SSA_0566 -71 5.6 AATTTTCAGATAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: codY
Ortholog function: Nutrient limitation global transcriptional regulator CodY, CodY family
Lactococcus lactis subsp. cremoris SK11 LACR_0168 -101 5.4 AATTTTCTGACAATT
Lactococcus lactis subsp. lactis Il1403 L0243 -101 5.4 AATTTTCTGACAATT
Streptococcus agalactiae 2603V/R SAG1675 -46 5 AATTTTGAGAATATT
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_1848 -80 5.6 AATTTTCTGATAATT
Streptococcus equi subsp. zooepidemicus MGCS10565 Sez_0387 -78 5.6 AATTTTCTGATAATT
Streptococcus gallolyticus UCN34 GALLO_1876 -77 5.6 AATTTTCAGATAATT
Streptococcus gordonii str. Challis substr. CH1 SGO_0431 -71 5.6 AATTTTCAGATAATT
Streptococcus mitis B6 smi_0687 -71 5.6 AATTTTCAGATAATT
Streptococcus mutans UA159 SMU.1824c -75 5.4 AATTTTCTGACAATT
Streptococcus pneumoniae TIGR4 SP_1584 -71 5.6 AATTTTCAGATAATT
Streptococcus pyogenes M1 GAS SPy1777 -80 5.6 AATTTTCTGATAATT
Streptococcus sanguinis SK36 SSA_0566 -71 5.6 AATTTTCAGATAATT
Streptococcus suis 05ZYH33 SSU05_0350 -74 5.3 AATATTCTGATAATT
Streptococcus thermophilus CNRZ1066 str1635 -132 5.4 AATTTTCAGACAATT
Streptococcus uberis 0140J SUB1528 -82 5.6 AATTTTCTGATAATT
Position: -42
Score: 5.3
Sequence: AAAATTCAGAAAATT
Locus tag: SSA_0593
SSA_0593 -42 5.3 AAAATTCAGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ymdE
Ortholog function: Conserved hypothetical protein
Streptococcus gordonii str. Challis substr. CH1 SGO_0476 -42 5.3 AAAATTCAGAAAATT
Streptococcus mitis B6 smi_1990 4 5.3 AAAATTCTGAAAATT
Streptococcus pneumoniae TIGR4 SP_0095 -41 5 AAAATTTAGAAAATT
Streptococcus sanguinis SK36 SSA_0593 -42 5.3 AAAATTCAGAAAATT
Position: -93
Score: 4.5
Sequence: AATTGTGAAAAAATT
Position: -53
Score: 5.8
Sequence: AATTTTCAGAAAATT
Locus tag: SSA_0774
SSA_0774 -93 4.5 AATTGTGAAAAAATT
-53 5.8 AATTTTCAGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gapN
Ortholog function: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (NADP) (EC 1.2.1.9)
Streptococcus agalactiae 2603V/R SAG0823 -72 4.6 ATATGTCAGATAATT
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_1419 -87 4.9 AATTTTCTGATACTT
Streptococcus equi subsp. zooepidemicus MGCS10565 Sez_0766 -87 4.6 AATTTTCAGACTCTT
Streptococcus gallolyticus UCN34 GALLO_0746 -87 5.3 AATTTTCTGAATTTT
Streptococcus mutans UA159 SMU.676 -89 5.3 AATTTTCTGAATTTT
Streptococcus pneumoniae TIGR4 SP_1119 -55 5.2 GATTTTCTGAAAATT
Streptococcus pyogenes M1 GAS SPy1371 -87 5.3 AATTTTCAGATATTT
Streptococcus sanguinis SK36 SSA_0774 -53 5.8 AATTTTCAGAAAATT
Streptococcus thermophilus CNRZ1066 str1263 -89 5 AATTTTCTGAATACT
Streptococcus uberis 0140J SUB1220 -87 5.4 AATTTTCAGACAATT
Position: -269
Score: 5.3
Sequence: AATTTTCAGAAAATA
Locus tag: SSA_0975
SSA_0975 -269 5.3 AATTTTCAGAAAATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: leuA
Ortholog function: 2-isopropylmalate synthase (EC 2.3.3.13)
Streptococcus gallolyticus UCN34 GALLO_0758 -266 5 AGTATTCAGAAAATT
Streptococcus mitis B6 smi_1218 -259 5.3 AATTTTCAGAAAATA
Streptococcus mutans UA159 SMU.1384 -246 5.4 ATTTTTCAGAAAATT
Streptococcus sanguinis SK36 SSA_0975 -269 5.3 AATTTTCAGAAAATA
Position: -87
Score: 4.5
Sequence: TATATTGAGAAAATT
Position: -78
Score: 4.5
Sequence: AAAATTCTGAAAAAA
Locus tag: SSA_0983
SSA_0983 -87 4.5 TATATTGAGAAAATT
-78 4.5 AAAATTCTGAAAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yfjA
Ortholog function: Conserved hypothetical protein
Lactococcus lactis subsp. cremoris SK11 LACR_0616 -82 4.4 ATTTTGTTGAAAATT
Streptococcus gordonii str. Challis substr. CH1 SGO_0911 -87 5.1 TATATTCAGAAAATT
Streptococcus mitis B6 smi_1213 -259 5.3 AATTTTCAGAAAATA
Streptococcus sanguinis SK36 SSA_0983 -87 4.5 TATATTGAGAAAATT
Streptococcus sanguinis SK36 SSA_0983 -269 5.3 AATTTTCAGAAAATA
Streptococcus thermophilus CNRZ1066 str1199 -80 5 AATATTCCGAAAATT
Position: -92
Score: 5.1
Sequence: AATTGTCAGACAATT
Locus tag: SSA_1129
SSA_1129 -92 5.1 AATTGTCAGACAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: efeO
Ortholog function: Ferrous iron transport periplasmic protein EfeO, contains peptidase-M75 domain and (frequently) cupredoxin-like domain
Streptococcus gordonii str. Challis substr. CH1 SGO_1165 -83 5.2 AATTATCTGACAATT
Streptococcus mitis B6 smi_1278 -92 5.4 AATTTTCTGACAATT
Streptococcus sanguinis SK36 SSA_1129 -92 5.1 AATTGTCAGACAATT
Position: -30
Score: 5.5
Sequence: AATTTTTTGAAAATT
Locus tag: SSA_1194
SSA_1194 -30 5.5 AATTTTTTGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: asd
Ortholog function: Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_1025 -60 5.5 AATTTTTAGAAAATT
Streptococcus gallolyticus UCN34 GALLO_1113 -52 5.1 ATTTTTTAGAAAATT
Streptococcus gordonii str. Challis substr. CH1 SGO_1206 -29 5.5 AATTTTTAGAAAATT
Streptococcus mitis B6 smi_1133 -31 5.5 AATTTTTAGAAAATT
Streptococcus pneumoniae TIGR4 SP_1013 -31 5.5 AATTTTTAGAAAATT
Streptococcus sanguinis SK36 SSA_1194 -30 5.5 AATTTTTTGAAAATT
Streptococcus uberis 0140J SUB0939 -54 5.5 AATTTTTAGAAAATT
Position: -98
Score: 5.8
Sequence: AATTTTCTGAAAATT
Locus tag: SSA_1225
SSA_1225 -98 5.8 AATTTTCTGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ilvE
Ortholog function: Branched-chain amino acid aminotransferase (EC 2.6.1.42)
Lactococcus lactis subsp. cremoris SK11 LACR_1409 -97 4.8 AATTGTTTGAAATTT
Streptococcus agalactiae 2603V/R SAG1152 -83 4.7 ATTTATCTGAATTTT
Streptococcus gallolyticus UCN34 GALLO_0979 -84 5.3 AATTTTCAGAATTTT
Streptococcus gordonii str. Challis substr. CH1 SGO_1238 -99 5.8 AATTTTCTGAAAATT
Streptococcus mitis B6 smi_0906 -88 5.8 AATTTTCTGAAAATT
Streptococcus mutans UA159 SMU.1203 -83 5.3 AATTTTCAGAATTTT
Streptococcus pneumoniae TIGR4 SP_0856 -88 5.8 AATTTTCTGAAAATT
Streptococcus pyogenes M1 GAS SPy0911 -102 4.6 AATTTTATGATAAAT
Streptococcus sanguinis SK36 SSA_1225 -98 5.8 AATTTTCTGAAAATT
Streptococcus thermophilus CNRZ1066 str0590 -90 4.9 AATTGTCAGAATTTT
Streptococcus uberis 0140J SUB1010 -88 4.8 AATATTCCGAATATT
Position: -112
Score: 4.6
Sequence: ATTTTTCTAAATTTT
Locus tag: SSA_1724
SSA_1724 -112 4.6 ATTTTTCTAAATTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: acuB
Ortholog function: Acetoin utilization protein AcuB
Streptococcus gordonii str. Challis substr. CH1 SGO_1625 -173 4.8 AATTTTTAGAAACTT
Streptococcus mitis B6 smi_1410 -92 4.7 ACTTTTCTGAATTTT
Streptococcus pneumoniae TIGR4 SP_0754 -183 4.4 TAATTTCTAATAATT
Streptococcus sanguinis SK36 SSA_1724 -112 4.6 ATTTTTCTAAATTTT
Position: -65
Score: 5.2
Sequence: AATTGTCAGATAATT
Locus tag: SSA_1729
SSA_1729 -65 5.2 AATTGTCAGATAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: livK
Ortholog function: Branched-chain amino acids ABC transporter, substrate-binding protein (TC 3.A.1.4.1)
Streptococcus agalactiae 2603V/R SAG1582 -56 5.3 AATATTCTGATAATT
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_0443 -98 4.9 ATTTTTCAAAATATT
-65 5.6 AATTTTCTGATAATT
Streptococcus gallolyticus UCN34 GALLO_1760 -66 5.6 AATTTTCTGATAATT
Streptococcus gordonii str. Challis substr. CH1 SGO_1630 -66 5.6 AATTTTCTGATAATT
Streptococcus mitis B6 smi_1415 -61 5.6 AATTTTCTGATAATT
Streptococcus mutans UA159 SMU.1669 -66 5.3 AATATTCAGATAATT
Streptococcus pneumoniae TIGR4 SP_0749 -60 5.6 AATTTTCTGATAATT
Streptococcus sanguinis SK36 SSA_1729 -65 5.2 AATTGTCAGATAATT
Streptococcus suis 05ZYH33 SSU05_1548 -64 5.6 AATTTTCAGATAATT
Streptococcus thermophilus CNRZ1066 str0359 -65 5.6 AATTTTCTGATAATT
Streptococcus uberis 0140J SUB0432 -66 5.6 AATTTTCTGATAATT
Position: -56
Score: 5.4
Sequence: AATTGTCAGAAAATT
Locus tag: SSA_1882
SSA_1882 -56 5.4 AATTGTCAGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: scpC
Ortholog function: Serine endopeptidase ScpC (EC 3.4.21.-)
Streptococcus gordonii str. Challis substr. CH1 SGO_0566 -55 5.4 AATTTTCAGACAATT
Streptococcus mitis B6 smi_1398 -57 5.6 AATTTTCAGATAATT
Streptococcus sanguinis SK36 SSA_1882 -56 5.4 AATTGTCAGAAAATT
Position: -47
Score: 5.3
Sequence: AATTTTCAGAATTTT
Locus tag: SSA_1943
SSA_1943 -47 5.3 AATTTTCAGAATTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: thrA
Ortholog function: Aspartokinase (EC 2.7.2.4)
Lactococcus lactis subsp. cremoris SK11 LACR_0783 -71 5.6 AATTATCTGAAAATT
Lactococcus lactis subsp. lactis Il1403 L0097 -70 5.6 AATTATCTGAAAATT
Streptococcus agalactiae 2603V/R SAG0339 -52 4.9 AATTTTCTGACTTTT
Streptococcus gallolyticus UCN34 GALLO_0331 -52 5.3 AATTTTCAGAATTTT
Streptococcus gordonii str. Challis substr. CH1 SGO_1701 -38 4.5 AATTGTTTGAATAAT
Streptococcus mutans UA159 SMU.1748 -53 5.3 AATTTTCTGAATTTT
Streptococcus sanguinis SK36 SSA_1943 -47 5.3 AATTTTCAGAATTTT
Streptococcus suis 05ZYH33 SSU05_1811 -123 4.6 GTTTTTCTGAAATTT
Streptococcus thermophilus CNRZ1066 str0378 -56 5.1 AATTATCAGAATTTT
Streptococcus uberis 0140J SUB0316 -26 5 AATATTCATAAAATT
Position: -87
Score: 5.6
Sequence: AATATTCTGAAAATT
Locus tag: SSA_1948
SSA_1948 -87 5.6 AATATTCTGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: oppA2
Ortholog function: Oligopeptide ABC transporter, substrate-binding protein (TC 3.A.1.5.1)
Streptococcus gordonii str. Challis substr. CH1 SGO_1712 -90 5.2 AATATTCTGACAATT
Streptococcus mitis B6 smi_1758 -71 5.3 AAAATTCAGAAAATT
Streptococcus pneumoniae TIGR4 SP_0366 -71 5.3 AAAATTCTGAAAATT
Streptococcus sanguinis SK36 SSA_2165 -78 5.6 AATTATCAGAAAATT
Streptococcus sanguinis SK36 SSA_1948 -87 5.6 AATATTCTGAAAATT
Position: -37
Score: 5.5
Sequence: AATTTTTAGAAAATT
Locus tag: SSA_1970
SSA_1970 -37 5.5 AATTTTTAGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ilvB
Ortholog function: Acetolactate synthase large subunit (EC 2.2.1.6)
Lactococcus lactis subsp. cremoris SK11 LACR_1311 -86 4.9 AATATTCTGACAAAT
Lactococcus lactis subsp. lactis Il1403 L0078 -86 4.9 AATATTCTGACAAAT
Streptococcus gallolyticus UCN34 GALLO_0305 -42 5.2 AATTTTTAGATAATT
Streptococcus gordonii str. Challis substr. CH1 SGO_0526 -249 5.8 AATTTTCTGAAAATT
-27 5.1 AATTTTTTGACAATT
Streptococcus mitis B6 smi_1825 -93 5.3 AAAATTCAGAAAATT
Streptococcus mutans UA159 SMU.231 -42 5.5 AATTTTTTGAAAATT
Streptococcus pneumoniae TIGR4 SP_0445 -93 5.3 AAAATTCAGAAAATT
Streptococcus sanguinis SK36 SSA_1970 -37 5.5 AATTTTTAGAAAATT
Streptococcus suis 05ZYH33 SSU05_1888 -296 5.8 AATTTTCAGAAAATT
Streptococcus thermophilus CNRZ1066 str1873 -27 5.2 AATTTTTAGATAATT
Position: 22
Score: 4.5
Sequence: AATTTCCAGAAAATG
Locus tag: SSA_2051
SSA_2051 22 4.5 AATTTCCAGAAAATG
Supported by regulated orthologs from reference regulons
Ortholog gene name: pepF
Ortholog function: Oligoendopeptidase F
Streptococcus agalactiae 2603V/R SAG0758 -127 5.1 AATTTTCAGATTTTT
Streptococcus gallolyticus UCN34 GALLO_1516 -220 5.1 AATTTTCTGATTTTT
Streptococcus gordonii str. Challis substr. CH1 SGO_0342 22 4.5 AATTTCCAGAAAATG
Streptococcus sanguinis SK36 SSA_2051 22 4.5 AATTTCCAGAAAATG
Streptococcus uberis 0140J SUB0601 -154 4.8 CTTTTTCTGAAAATT
Position: -78
Score: 5.6
Sequence: AATTATCAGAAAATT
Locus tag: SSA_2165
SSA_2165 -78 5.6 AATTATCAGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: oppA2
Ortholog function: Oligopeptide ABC transporter, substrate-binding protein (TC 3.A.1.5.1)
Streptococcus gordonii str. Challis substr. CH1 SGO_1712 -90 5.2 AATATTCTGACAATT
Streptococcus mitis B6 smi_1758 -71 5.3 AAAATTCAGAAAATT
Streptococcus pneumoniae TIGR4 SP_0366 -71 5.3 AAAATTCTGAAAATT
Streptococcus sanguinis SK36 SSA_2165 -78 5.6 AATTATCAGAAAATT
Streptococcus sanguinis SK36 SSA_1948 -87 5.6 AATATTCTGAAAATT
Position: -78
Score: 5.3
Sequence: AATCTTCTGAAAATT
Locus tag: SSA_2286
SSA_2286 -78 5.3 AATCTTCTGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ilvD
Ortholog function: Dihydroxy-acid dehydratase (EC 4.2.1.9)
Streptococcus gordonii str. Challis substr. CH1 SGO_2064 -95 5.3 AAAATTCTGAAAATT
Streptococcus mitis B6 smi_0113 -85 5.8 AATTTTCTGAAAATT
Streptococcus pneumoniae TIGR4 SP_2126 -85 5.8 AATTTTCTGAAAATT
Streptococcus sanguinis SK36 SSA_2286 -78 5.3 AATCTTCTGAAAATT
Streptococcus thermophilus CNRZ1066 str1604 -61 4.7 ATTTTTTAGACAATT
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