Propagation of CodY regulog to Streptococcus thermophilus CNRZ1066
| Source regulog: | CodY - Streptococcaceae |
| Regulator type: | Transcription factor |
| Regulator family: | CodY |
| Regulation mode: | repressor (activator) |
| Biological process: | Amino acid metabolism |
| Effector: | Guanosine triphosphate; Branched-chain amino acids |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Streptococcus thermophilus CNRZ1066 |
| Orthologous TF(s) | str1635 |
| Regulated genes | 27 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -60
Score: 5.4 Sequence: ATTTTTCTGAAAATT
Locus tag: str0150
|
||||
| str0150 | -60 | 5.4 | ATTTTTCTGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ilvA | ||||
| Ortholog function: Threonine dehydratase (EC 4.3.1.19) | ||||
| Lactococcus lactis subsp. lactis Il1403 | L0081 | -86 | 4.9 | AATATTCTGACAAAT |
| Streptococcus gallolyticus UCN34 | GALLO_0308 | -42 | 5.2 | AATTTTTAGATAATT |
| Streptococcus gordonii str. Challis substr. CH1 | SGO_0529 | -249 | 5.8 | AATTTTCTGAAAATT |
| -27 | 5.1 | AATTTTTTGACAATT | ||
| Streptococcus mitis B6 | smi_1822 | -93 | 5.3 | AAAATTCAGAAAATT |
| Streptococcus mutans UA159 | SMU.234 | -42 | 5.5 | AATTTTTTGAAAATT |
| Streptococcus pneumoniae TIGR4 | SP_0450 | -93 | 5.3 | AAAATTCAGAAAATT |
| Streptococcus sanguinis SK36 | SSA_1967 | -37 | 5.5 | AATTTTTAGAAAATT |
| Streptococcus suis 05ZYH33 | SSU05_1885 | -296 | 5.8 | AATTTTCAGAAAATT |
| Streptococcus thermophilus CNRZ1066 | str0150 | -60 | 5.4 | ATTTTTCTGAAAATT |
|
Position: -57
Score: 5.1 Sequence: AATTTTCAGAAATTA
Locus tag: str0229
|
||||
| str0229 | -57 | 5.1 | AATTTTCAGAAATTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pepC | ||||
| Ortholog function: Aminopeptidase C (EC 3.4.22.40) | ||||
| Lactococcus lactis subsp. cremoris SK11 | LACR_2073 | -125 | 4.8 | ATTTTTTTGATAATT |
| Lactococcus lactis subsp. lactis Il1403 | L130687 | -125 | 4.8 | ATTTTTTTGATAATT |
| Streptococcus agalactiae 2603V/R | SAG0297 | -48 | 4.8 | AATATTCAGAATGTT |
| Streptococcus gallolyticus UCN34 | GALLO_0478 | -125 | 4.7 | AAATGTCAGAATTTT |
| Streptococcus thermophilus CNRZ1066 | str0229 | -57 | 5.1 | AATTTTCAGAAATTA |
|
Position: -74
Score: 5.5 Sequence: AAATTTCTGAAAATT
Locus tag: str0280
|
||||
| str0280 | -74 | 5.5 | AAATTTCTGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ureI | ||||
| Ortholog function: Urea channel UreI | ||||
| Streptococcus thermophilus CNRZ1066 | str0280 | -74 | 5.5 | AAATTTCTGAAAATT |
|
Position: -65
Score: 5.6 Sequence: AATTTTCTGATAATT
Locus tag: str0359
|
||||
| str0359 | -65 | 5.6 | AATTTTCTGATAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: livK | ||||
| Ortholog function: Branched-chain amino acids ABC transporter, substrate-binding protein (TC 3.A.1.4.1) | ||||
| Streptococcus agalactiae 2603V/R | SAG1582 | -56 | 5.3 | AATATTCTGATAATT |
| Streptococcus dysgalactiae subsp. equisimilis GGS_124 | SDEG_0443 | -98 | 4.9 | ATTTTTCAAAATATT |
| -65 | 5.6 | AATTTTCTGATAATT | ||
| Streptococcus gallolyticus UCN34 | GALLO_1760 | -66 | 5.6 | AATTTTCTGATAATT |
| Streptococcus gordonii str. Challis substr. CH1 | SGO_1630 | -66 | 5.6 | AATTTTCTGATAATT |
| Streptococcus mitis B6 | smi_1415 | -61 | 5.6 | AATTTTCTGATAATT |
| Streptococcus mutans UA159 | SMU.1669 | -66 | 5.3 | AATATTCAGATAATT |
| Streptococcus pneumoniae TIGR4 | SP_0749 | -60 | 5.6 | AATTTTCTGATAATT |
| Streptococcus sanguinis SK36 | SSA_1729 | -65 | 5.2 | AATTGTCAGATAATT |
| Streptococcus suis 05ZYH33 | SSU05_1548 | -64 | 5.6 | AATTTTCAGATAATT |
| Streptococcus thermophilus CNRZ1066 | str0359 | -65 | 5.6 | AATTTTCTGATAATT |
| Streptococcus uberis 0140J | SUB0432 | -66 | 5.6 | AATTTTCTGATAATT |
|
Position: -76
Score: 4.7 Sequence: AATTATTGGAAAATT
Position: -56
Score: 4.7 Sequence: ATTTTTCTAAAAAAT
Locus tag: str0377
|
||||
| str0377 | -76 | 4.7 | AATTATTGGAAAATT | |
| -56 | 4.7 | ATTTTTCTAAAAAAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: asnA | ||||
| Ortholog function: Aspartate--ammonia ligase (EC 6.3.1.1) | ||||
| Streptococcus gallolyticus UCN34 | GALLO_0534 | -144 | 4.8 | AATTTTCAAAAAAGT |
| Streptococcus pyogenes M1 GAS | SPy1539 | -107 | 4.9 | ATTTTTCAAAATATT |
| Streptococcus suis 05ZYH33 | SSU05_0467 | -124 | 5.3 | AATTATCAGAATATT |
| Streptococcus uberis 0140J | SUB1323 | -123 | 4.6 | AATATACTGAAAAAT |
|
Position: -56
Score: 5.1 Sequence: AATTATCAGAATTTT
Locus tag: str0378
|
||||
| str0378 | -56 | 5.1 | AATTATCAGAATTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: thrA | ||||
| Ortholog function: Aspartokinase (EC 2.7.2.4) | ||||
| Lactococcus lactis subsp. cremoris SK11 | LACR_0783 | -71 | 5.6 | AATTATCTGAAAATT |
| Lactococcus lactis subsp. lactis Il1403 | L0097 | -70 | 5.6 | AATTATCTGAAAATT |
| Streptococcus agalactiae 2603V/R | SAG0339 | -52 | 4.9 | AATTTTCTGACTTTT |
| Streptococcus gallolyticus UCN34 | GALLO_0331 | -52 | 5.3 | AATTTTCAGAATTTT |
| Streptococcus gordonii str. Challis substr. CH1 | SGO_1701 | -38 | 4.5 | AATTGTTTGAATAAT |
| Streptococcus mutans UA159 | SMU.1748 | -53 | 5.3 | AATTTTCTGAATTTT |
| Streptococcus sanguinis SK36 | SSA_1943 | -47 | 5.3 | AATTTTCAGAATTTT |
| Streptococcus suis 05ZYH33 | SSU05_1811 | -123 | 4.6 | GTTTTTCTGAAATTT |
| Streptococcus thermophilus CNRZ1066 | str0378 | -56 | 5.1 | AATTATCAGAATTTT |
| Streptococcus uberis 0140J | SUB0316 | -26 | 5 | AATATTCATAAAATT |
|
Position: -52
Score: 5 Sequence: AAGATTCTGAAAATT
Locus tag: str0430
|
||||
| str0430 | -52 | 5 | AAGATTCTGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gdhA | ||||
| Ortholog function: NADP-specific glutamate dehydrogenase (EC 1.4.1.4) | ||||
| Streptococcus agalactiae 2603V/R | SAG1335 | -55 | 4.9 | AAAATTCTGACAATT |
| Streptococcus dysgalactiae subsp. equisimilis GGS_124 | SDEG_0823 | -61 | 5.3 | AAAATTCAGAAAATT |
| Streptococcus equi subsp. zooepidemicus MGCS10565 | Sez_1090 | -65 | 5.3 | AAAATTCAGAAAATT |
| Streptococcus gallolyticus UCN34 | GALLO_1293 | -78 | 5.8 | AATTTTCAGAAAATT |
| Streptococcus gordonii str. Challis substr. CH1 | SGO_0276 | -95 | 5.8 | AATTTTCAGAAAATT |
| Streptococcus mitis B6 | smi_0814 | -95 | 5.5 | AATTTTTAGAAAATT |
| Streptococcus mutans UA159 | SMU.913 | -68 | 5.6 | AATATTCAGAAAATT |
| Streptococcus pneumoniae TIGR4 | SP_1306 | -94 | 5.5 | AATTTTTAGAAAATT |
| Streptococcus sanguinis SK36 | SSA_0371 | -182 | 5.5 | AATTTTTAGAAAATT |
| Streptococcus suis 05ZYH33 | SSU05_0252 | -45 | 5.1 | AATTGTCAGACAATT |
| Streptococcus thermophilus CNRZ1066 | str0430 | -52 | 5 | AAGATTCTGAAAATT |
| Streptococcus uberis 0140J | SUB0762 | -60 | 5.6 | AATATTCTGAAAATT |
|
Position: -70
Score: 4.6 Sequence: AATATTCTGTCAATT
Locus tag: str0469
|
||||
| str0469 | -70 | 4.6 | AATATTCTGTCAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hom | ||||
| Ortholog function: Homoserine dehydrogenase (EC 1.1.1.3) | ||||
| Lactococcus lactis subsp. lactis Il1403 | L0090 | -41 | 4.9 | AATTATCTTAAAATT |
| Streptococcus gallolyticus UCN34 | GALLO_1241 | -118 | 4.8 | ATTTTTCTGTAAATT |
| Streptococcus mitis B6 | smi_0773 | -56 | 5.2 | AATTTTCACAAAATT |
| Streptococcus pneumoniae TIGR4 | SP_1361 | -56 | 5.2 | AATTTTCACAAAATT |
| Streptococcus suis 05ZYH33 | SSU05_0801 | -52 | 5 | AATAGTCAGAATATT |
| Streptococcus thermophilus CNRZ1066 | str0469 | -70 | 4.6 | AATATTCTGTCAATT |
|
Position: -45
Score: 5.2 Sequence: AATTATCAAAAAATT
Locus tag: str0494
|
||||
| str0494 | -45 | 5.2 | AATTATCAAAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nrgA | ||||
| Ortholog function: Ammonium transporter | ||||
| Lactococcus lactis subsp. cremoris SK11 | LACR_1699 | -61 | 5.1 | AATATTCAGAAAATA |
| Lactococcus lactis subsp. lactis Il1403 | L0236 | -62 | 5 | AATTGTCAGAAAATA |
| Streptococcus gallolyticus UCN34 | GALLO_1749 | -148 | 5 | AAAATTTAGAAAATT |
| Streptococcus mitis B6 | smi_0683 | -93 | 5.2 | AATTATCAAAAAATT |
| Streptococcus mutans UA159 | SMU.1658 | -85 | 5.5 | AATTTTTAGAAAATT |
| Streptococcus thermophilus CNRZ1066 | str0494 | -45 | 5.2 | AATTATCAAAAAATT |
|
Position: -108
Score: 4.7 Sequence: AATATTCTGAATTAT
Locus tag: str0509
|
||||
| str0509 | -108 | 4.7 | AATATTCTGAATTAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: aapA | ||||
| Ortholog function: Amino acid permease | ||||
| Streptococcus dysgalactiae subsp. equisimilis GGS_124 | SDEG_1715 | -41 | 5 | AATTTTCTGAAAAAA |
| Streptococcus pyogenes M1 GAS | SPy1654 | -53 | 5 | AATTTTCTGAAAAAA |
| Streptococcus thermophilus CNRZ1066 | str0509 | -108 | 4.7 | AATATTCTGAATTAT |
| Streptococcus uberis 0140J | SUB1411 | -54 | 4.8 | AATATTCTGAAAAAA |
|
Position: -90
Score: 4.9 Sequence: AATTGTCAGAATTTT
Locus tag: str0590
|
||||
| str0590 | -90 | 4.9 | AATTGTCAGAATTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ilvE | ||||
| Ortholog function: Branched-chain amino acid aminotransferase (EC 2.6.1.42) | ||||
| Lactococcus lactis subsp. cremoris SK11 | LACR_1409 | -97 | 4.8 | AATTGTTTGAAATTT |
| Streptococcus agalactiae 2603V/R | SAG1152 | -83 | 4.7 | ATTTATCTGAATTTT |
| Streptococcus gallolyticus UCN34 | GALLO_0979 | -84 | 5.3 | AATTTTCAGAATTTT |
| Streptococcus gordonii str. Challis substr. CH1 | SGO_1238 | -99 | 5.8 | AATTTTCTGAAAATT |
| Streptococcus mitis B6 | smi_0906 | -88 | 5.8 | AATTTTCTGAAAATT |
| Streptococcus mutans UA159 | SMU.1203 | -83 | 5.3 | AATTTTCAGAATTTT |
| Streptococcus pneumoniae TIGR4 | SP_0856 | -88 | 5.8 | AATTTTCTGAAAATT |
| Streptococcus pyogenes M1 GAS | SPy0911 | -102 | 4.6 | AATTTTATGATAAAT |
| Streptococcus sanguinis SK36 | SSA_1225 | -98 | 5.8 | AATTTTCTGAAAATT |
| Streptococcus thermophilus CNRZ1066 | str0590 | -90 | 4.9 | AATTGTCAGAATTTT |
| Streptococcus uberis 0140J | SUB1010 | -88 | 4.8 | AATATTCCGAATATT |
|
Position: -108
Score: 4.9 Sequence: AAAAGTCAGAAAATT
Locus tag: str0718
|
||||
| str0718 | -108 | 4.9 | AAAAGTCAGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ppc | ||||
| Ortholog function: Phosphoenolpyruvate carboxylase (EC 4.1.1.31) | ||||
| Streptococcus agalactiae 2603V/R | SAG0759 | -96 | 5.1 | AAAAATCTGAAAATT |
| Streptococcus dysgalactiae subsp. equisimilis GGS_124 | SDEG_0621 | -167 | 4.5 | CATTTTCAGGAAATT |
| Streptococcus gallolyticus UCN34 | GALLO_1515 | -132 | 5.1 | AAAAATCAGAAAATT |
| Streptococcus thermophilus CNRZ1066 | str0718 | -108 | 4.9 | AAAAGTCAGAAAATT |
| Streptococcus uberis 0140J | SUB0602 | -55 | 4.8 | AATTTTCAGAAAAAG |
|
Position: -33
Score: 5.2 Sequence: ATTATTCTGAAAATT
Locus tag: str0745
|
||||
| str0745 | -33 | 5.2 | ATTATTCTGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SMU.1109 | ||||
| Ortholog function: Predicted Mn2+/Fe2+ transporter, NRAMP family | ||||
| Streptococcus gallolyticus UCN34 | GALLO_1124 | -45 | 5.3 | AATTATCTGAATATT |
| Streptococcus gordonii str. Challis substr. CH1 | SGO_1506 | -102 | 4.8 | TATTTTCCGAAAATT |
| -42 | 5.6 | AATTATCTGAAAATT | ||
| Streptococcus mutans UA159 | SMU.1109c | -105 | 5.3 | AATTTTCTGAAAATA |
| Streptococcus pneumoniae TIGR4 | SP_0159 | -33 | 5.2 | ATTATTCTGAAAATT |
| Streptococcus thermophilus CNRZ1066 | str0745 | -106 | 5 | ATTTTTCAGAAAATA |
| -33 | 5.2 | ATTATTCTGAAAATT | ||
|
Position: -80
Score: 5 Sequence: AATATTCCGAAAATT
Locus tag: str1199
|
||||
| str1199 | -80 | 5 | AATATTCCGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yfjA | ||||
| Ortholog function: Conserved hypothetical protein | ||||
| Lactococcus lactis subsp. cremoris SK11 | LACR_0616 | -82 | 4.4 | ATTTTGTTGAAAATT |
| Streptococcus gordonii str. Challis substr. CH1 | SGO_0911 | -87 | 5.1 | TATATTCAGAAAATT |
| Streptococcus mitis B6 | smi_1213 | -259 | 5.3 | AATTTTCAGAAAATA |
| Streptococcus sanguinis SK36 | SSA_0983 | -87 | 4.5 | TATATTGAGAAAATT |
| Streptococcus sanguinis SK36 | SSA_0983 | -269 | 5.3 | AATTTTCAGAAAATA |
| Streptococcus thermophilus CNRZ1066 | str1199 | -80 | 5 | AATATTCCGAAAATT |
|
Position: -89
Score: 5 Sequence: AATTTTCTGAATACT
Locus tag: str1263
|
||||
| str1263 | -89 | 5 | AATTTTCTGAATACT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gapN | ||||
| Ortholog function: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (NADP) (EC 1.2.1.9) | ||||
| Streptococcus agalactiae 2603V/R | SAG0823 | -72 | 4.6 | ATATGTCAGATAATT |
| Streptococcus dysgalactiae subsp. equisimilis GGS_124 | SDEG_1419 | -87 | 4.9 | AATTTTCTGATACTT |
| Streptococcus equi subsp. zooepidemicus MGCS10565 | Sez_0766 | -87 | 4.6 | AATTTTCAGACTCTT |
| Streptococcus gallolyticus UCN34 | GALLO_0746 | -87 | 5.3 | AATTTTCTGAATTTT |
| Streptococcus mutans UA159 | SMU.676 | -89 | 5.3 | AATTTTCTGAATTTT |
| Streptococcus pneumoniae TIGR4 | SP_1119 | -55 | 5.2 | GATTTTCTGAAAATT |
| Streptococcus pyogenes M1 GAS | SPy1371 | -87 | 5.3 | AATTTTCAGATATTT |
| Streptococcus sanguinis SK36 | SSA_0774 | -53 | 5.8 | AATTTTCAGAAAATT |
| Streptococcus thermophilus CNRZ1066 | str1263 | -89 | 5 | AATTTTCTGAATACT |
| Streptococcus uberis 0140J | SUB1220 | -87 | 5.4 | AATTTTCAGACAATT |
|
Position: -53
Score: 4.5 Sequence: CGTTTTCAGAAAATT
Locus tag: str1297
|
||||
| str1297 | -53 | 4.5 | CGTTTTCAGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: dapA | ||||
| Ortholog function: Dihydrodipicolinate synthase (EC 4.2.1.52) | ||||
| Lactococcus lactis subsp. lactis Il1403 | L0093 | -190 | 4.8 | AATTGTCACAAAATT |
| Streptococcus gallolyticus UCN34 | GALLO_1112 | -52 | 5.1 | ATTTTTTAGAAAATT |
| Streptococcus gordonii str. Challis substr. CH1 | SGO_1205 | -29 | 5.5 | AATTTTTAGAAAATT |
| Streptococcus mitis B6 | smi_1132 | -31 | 5.5 | AATTTTTAGAAAATT |
| Streptococcus pneumoniae TIGR4 | SP_1014 | -31 | 5.5 | AATTTTTAGAAAATT |
| Streptococcus sanguinis SK36 | SSA_1193 | -30 | 5.5 | AATTTTTTGAAAATT |
| Streptococcus thermophilus CNRZ1066 | str1297 | -53 | 4.5 | CGTTTTCAGAAAATT |
| Streptococcus uberis 0140J | SUB0938 | -54 | 5.5 | AATTTTTAGAAAATT |
|
Position: -121
Score: 4.9 Sequence: ATTATTCTGAAAAAT
Locus tag: str1443
|
||||
| str1443 | -121 | 4.9 | ATTATTCTGAAAAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: oppA2 | ||||
| Ortholog function: Oligopeptide ABC transporter, substrate-binding protein (TC 3.A.1.5.1) | ||||
| Streptococcus mitis B6 | smi_0322 | -83 | 5.6 | AATATTCTGAAAATT |
| Streptococcus pneumoniae TIGR4 | SP_1891 | -87 | 5.6 | AATATTCTGAAAATT |
| Streptococcus thermophilus CNRZ1066 | str1445 | -76 | 4.7 | AATTTTCTGATAAAA |
| Streptococcus thermophilus CNRZ1066 | str1443 | -194 | 4.6 | ATTTTTTAGAAAATA |
| -121 | 4.9 | ATTATTCTGAAAAAT | ||
| Streptococcus thermophilus CNRZ1066 | str1442 | -194 | 4.6 | ATTTTTTAGAAAATA |
| -121 | 4.9 | ATTATTCTGAAAAAT | ||
|
Position: -76
Score: 4.7 Sequence: AATTTTCTGATAAAA
Locus tag: str1445
|
||||
| str1445 | -76 | 4.7 | AATTTTCTGATAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: oppA2 | ||||
| Ortholog function: Oligopeptide ABC transporter, substrate-binding protein (TC 3.A.1.5.1) | ||||
| Streptococcus mitis B6 | smi_0322 | -83 | 5.6 | AATATTCTGAAAATT |
| Streptococcus pneumoniae TIGR4 | SP_1891 | -87 | 5.6 | AATATTCTGAAAATT |
| Streptococcus thermophilus CNRZ1066 | str1445 | -76 | 4.7 | AATTTTCTGATAAAA |
| Streptococcus thermophilus CNRZ1066 | str1443 | -194 | 4.6 | ATTTTTTAGAAAATA |
| -121 | 4.9 | ATTATTCTGAAAAAT | ||
| Streptococcus thermophilus CNRZ1066 | str1442 | -194 | 4.6 | ATTTTTTAGAAAATA |
| -121 | 4.9 | ATTATTCTGAAAAAT | ||
|
Position: -53
Score: 5.6 Sequence: AATATTCAGAAAATT
Locus tag: str1529
|
||||
| str1529 | -53 | 5.6 | AATATTCAGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: serC | ||||
| Ortholog function: Phosphoserine aminotransferase (EC 2.6.1.52) | ||||
| Lactococcus lactis subsp. cremoris SK11 | LACR_0619 | -59 | 5.6 | AATTATCAGAAAATT |
| Lactococcus lactis subsp. lactis Il1403 | L0083 | -59 | 5.6 | AATTATCAGAAAATT |
| Streptococcus gallolyticus UCN34 | GALLO_1746 | -51 | 5.3 | AAAATTCAGAAAATT |
| Streptococcus mutans UA159 | SMU.1656 | -50 | 5.3 | AAAATTCTGAAAATT |
| Streptococcus suis 05ZYH33 | SSU05_0665 | -54 | 5.2 | AATTGTCTGAATATT |
| Streptococcus uberis 0140J | SUB0445 | -53 | 5.3 | AAAATTCTGAAAATT |
|
Position: -61
Score: 4.7 Sequence: ATTTTTTAGACAATT
Locus tag: str1604
|
||||
| str1604 | -61 | 4.7 | ATTTTTTAGACAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ilvD | ||||
| Ortholog function: Dihydroxy-acid dehydratase (EC 4.2.1.9) | ||||
| Streptococcus gordonii str. Challis substr. CH1 | SGO_2064 | -95 | 5.3 | AAAATTCTGAAAATT |
| Streptococcus mitis B6 | smi_0113 | -85 | 5.8 | AATTTTCTGAAAATT |
| Streptococcus pneumoniae TIGR4 | SP_2126 | -85 | 5.8 | AATTTTCTGAAAATT |
| Streptococcus sanguinis SK36 | SSA_2286 | -78 | 5.3 | AATCTTCTGAAAATT |
| Streptococcus thermophilus CNRZ1066 | str1604 | -61 | 4.7 | ATTTTTTAGACAATT |
|
Position: -132
Score: 5.4 Sequence: AATTTTCAGACAATT
Locus tag: str1635
|
||||
| str1635 | -132 | 5.4 | AATTTTCAGACAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: codY | ||||
| Ortholog function: Nutrient limitation global transcriptional regulator CodY, CodY family | ||||
| Lactococcus lactis subsp. cremoris SK11 | LACR_0168 | -101 | 5.4 | AATTTTCTGACAATT |
| Lactococcus lactis subsp. lactis Il1403 | L0243 | -101 | 5.4 | AATTTTCTGACAATT |
| Streptococcus agalactiae 2603V/R | SAG1675 | -46 | 5 | AATTTTGAGAATATT |
| Streptococcus dysgalactiae subsp. equisimilis GGS_124 | SDEG_1848 | -80 | 5.6 | AATTTTCTGATAATT |
| Streptococcus equi subsp. zooepidemicus MGCS10565 | Sez_0387 | -78 | 5.6 | AATTTTCTGATAATT |
| Streptococcus gallolyticus UCN34 | GALLO_1876 | -77 | 5.6 | AATTTTCAGATAATT |
| Streptococcus gordonii str. Challis substr. CH1 | SGO_0431 | -71 | 5.6 | AATTTTCAGATAATT |
| Streptococcus mitis B6 | smi_0687 | -71 | 5.6 | AATTTTCAGATAATT |
| Streptococcus mutans UA159 | SMU.1824c | -75 | 5.4 | AATTTTCTGACAATT |
| Streptococcus pneumoniae TIGR4 | SP_1584 | -71 | 5.6 | AATTTTCAGATAATT |
| Streptococcus pyogenes M1 GAS | SPy1777 | -80 | 5.6 | AATTTTCTGATAATT |
| Streptococcus sanguinis SK36 | SSA_0566 | -71 | 5.6 | AATTTTCAGATAATT |
| Streptococcus suis 05ZYH33 | SSU05_0350 | -74 | 5.3 | AATATTCTGATAATT |
| Streptococcus thermophilus CNRZ1066 | str1635 | -132 | 5.4 | AATTTTCAGACAATT |
| Streptococcus uberis 0140J | SUB1528 | -82 | 5.6 | AATTTTCTGATAATT |
|
Position: -38
Score: 4.6 Sequence: AAAATTCAGAATATA
Locus tag: str1777
|
||||
| str1777 | -38 | 4.6 | AAAATTCAGAATATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glnR | ||||
| Ortholog function: Nitrogen metabolism transcriptional regulator GlnR, MerR family | ||||
| Streptococcus gallolyticus UCN34 | GALLO_1993 | -38 | 4.7 | AATTTTCAGACTATA |
| Streptococcus mutans UA159 | SMU.363 | -39 | 5.1 | AATTTTCAGAATATA |
| Streptococcus thermophilus CNRZ1066 | str1777 | -38 | 4.6 | AAAATTCAGAATATA |
| Streptococcus uberis 0140J | SUB1627 | -103 | 5.1 | AATATTCAGAAAATA |
|
Position: -171
Score: 4.6 Sequence: AAAGTTCTAAAAATT
Locus tag: str1868
|
||||
| str1868 | -171 | 4.6 | AAAGTTCTAAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rpoB | ||||
| Ortholog function: DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) | ||||
| Streptococcus agalactiae 2603V/R | SAG0160 | -128 | 5.2 | AACTTTCTGAAAATT |
| Streptococcus dysgalactiae subsp. equisimilis GGS_124 | SDEG_0131 | -91 | 4.6 | AAGATTCTAAAAATT |
| Streptococcus gallolyticus UCN34 | GALLO_0084 | -165 | 4.6 | AAGATTCTAAAAATT |
| Streptococcus gordonii str. Challis substr. CH1 | SGO_1927 | -222 | 5.4 | ATTTTTCTGAAAATT |
| Streptococcus mitis B6 | smi_1847 | -113 | 5 | AAGATTCTGAAAATT |
| Streptococcus mutans UA159 | SMU.1990 | -84 | 5.3 | AAAATTCTGAAAATT |
| Streptococcus pneumoniae TIGR4 | SP_1961 | -112 | 5 | AAGATTCTGAAAATT |
| Streptococcus pyogenes M1 GAS | SPy0098 | -91 | 5.2 | AATATTCTAAAAATT |
| Streptococcus suis 05ZYH33 | SSU05_0121 | -276 | 4.6 | AAGATTCTAAAAATT |
| Streptococcus thermophilus CNRZ1066 | str1868 | -171 | 4.6 | AAAGTTCTAAAAATT |
| Streptococcus uberis 0140J | SUB0115 | -90 | 4.6 | AAGATTCTAAAAATT |
|
Position: -27
Score: 5.2 Sequence: AATTTTTAGATAATT
Locus tag: str1873
|
||||
| str1873 | -27 | 5.2 | AATTTTTAGATAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ilvB | ||||
| Ortholog function: Acetolactate synthase large subunit (EC 2.2.1.6) | ||||
| Lactococcus lactis subsp. cremoris SK11 | LACR_1311 | -86 | 4.9 | AATATTCTGACAAAT |
| Lactococcus lactis subsp. lactis Il1403 | L0078 | -86 | 4.9 | AATATTCTGACAAAT |
| Streptococcus gallolyticus UCN34 | GALLO_0305 | -42 | 5.2 | AATTTTTAGATAATT |
| Streptococcus gordonii str. Challis substr. CH1 | SGO_0526 | -249 | 5.8 | AATTTTCTGAAAATT |
| -27 | 5.1 | AATTTTTTGACAATT | ||
| Streptococcus mitis B6 | smi_1825 | -93 | 5.3 | AAAATTCAGAAAATT |
| Streptococcus mutans UA159 | SMU.231 | -42 | 5.5 | AATTTTTTGAAAATT |
| Streptococcus pneumoniae TIGR4 | SP_0445 | -93 | 5.3 | AAAATTCAGAAAATT |
| Streptococcus sanguinis SK36 | SSA_1970 | -37 | 5.5 | AATTTTTAGAAAATT |
| Streptococcus suis 05ZYH33 | SSU05_1888 | -296 | 5.8 | AATTTTCAGAAAATT |
| Streptococcus thermophilus CNRZ1066 | str1873 | -27 | 5.2 | AATTTTTAGATAATT |
|
Position: -59
Score: 5.4 Sequence: AATTTTCTGACAATT
Locus tag: str1878
|
||||
| str1878 | -59 | 5.4 | AATTTTCTGACAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: thrC | ||||
| Ortholog function: Threonine synthase (EC 4.2.3.1) | ||||
| Streptococcus agalactiae 2603V/R | SAG0055 | -100 | 5.2 | AATTTTCTGAAAATC |
| Streptococcus dysgalactiae subsp. equisimilis GGS_124 | SDEG_0063 | -113 | 5.2 | AATTTTCAGAAAACT |
| Streptococcus gallolyticus UCN34 | GALLO_0042 | -61 | 5.6 | AATTTTCTGATAATT |
| Streptococcus gordonii str. Challis substr. CH1 | SGO_0139 | -57 | 5.2 | AATTTTCTGATAAAT |
| Streptococcus mitis B6 | smi_0193 | -57 | 5.4 | AATTTTCTGAAAAAT |
| Streptococcus mutans UA159 | SMU.70 | -59 | 5.2 | AATTGTCTGATAATT |
| Streptococcus pneumoniae TIGR4 | SP_2066 | -57 | 5.4 | AATTTTCTGAAAAAT |
| Streptococcus sanguinis SK36 | SSA_0095 | -57 | 5.2 | AATTTTCTGATAAAT |
| Streptococcus suis 05ZYH33 | SSU05_0281 | -56 | 4.8 | AATTTTCTGTCAATT |
| Streptococcus thermophilus CNRZ1066 | str1878 | -59 | 5.4 | AATTTTCTGACAATT |