Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of TreR (RgrA) regulog to Lactococcus lactis subsp. cremoris SK11

Reference regulog properties
Source regulog: TreR (RgrA) - Streptococcaceae
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process: Trehalose utilization
Effector: Trehalose-6-phosphate
Phylum: Firmicutes
Propagated regulon:
Target genome Lactococcus lactis subsp. cremoris SK11
Orthologous TF(s) LACR_0480
Regulated genes 2
Built upon 4 sites [see more]
Predicted regulatory interactions in Lactococcus lactis subsp. cremoris SK11
Locus tag Position Score Sequence
Position: -108
Score: 7.2
Sequence: TGCAGTTGTACGTACAAGTTAA
Locus tag: LACR_0480
LACR_0480 -108 7.2 TGCAGTTGTACGTACAAGTTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: treR
Ortholog function: Trehalose utilization transcriptional regulator RgrA, GntR family
Lactococcus lactis subsp. cremoris SK11 LACR_0480 -108 7.2 TGCAGTTGTACGTACAAGTTAA
Lactococcus lactis subsp. lactis Il1403 L0150 -93 7.4 TGAAGTTGTACGTACAAGTTAA
Position: -39
Score: 7.2
Sequence: TTAACTTGTACGTACAACTGCA
Locus tag: LACR_0481
LACR_0481 -39 7.2 TTAACTTGTACGTACAACTGCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: treP
Ortholog function: Trehalose-specific PTS, IIBC component (EC 2.7.1.69)
Lactococcus lactis subsp. cremoris SK11 LACR_0481 -39 7.2 TTAACTTGTACGTACAACTGCA
Lactococcus lactis subsp. cremoris SK11 LACR_0482 -39 7.2 TTAACTTGTACGTACAACTGCA
Lactococcus lactis subsp. lactis Il1403 L37338 -39 7.4 TTAACTTGTACGTACAACTTCA
Lactococcus lactis subsp. lactis Il1403 L37906 -39 7.4 TTAACTTGTACGTACAACTTCA