Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of GlnR regulog to Lactococcus lactis subsp. cremoris SK11

Reference regulog properties
Source regulog: GlnR - Streptococcaceae
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: repressor
Biological process: Nitrogen assimilation
Effector: Phosphorylated NtrB, signal histidine kinase
Phylum: Firmicutes
Propagated regulon:
Target genome Lactococcus lactis subsp. cremoris SK11
Orthologous TF(s) LACR_2513
Regulated genes 3
Built upon 66 sites [see more]
Predicted regulatory interactions in Lactococcus lactis subsp. cremoris SK11
Locus tag Position Score Sequence
Position: -138
Score: 6
Sequence: ATGTTATGTTATATAACAT
Position: -85
Score: 5.8
Sequence: GTGTTATATTTTATGACAT
Locus tag: LACR_1699
LACR_1699 -138 6 ATGTTATGTTATATAACAT
-85 5.8 GTGTTATATTTTATGACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nrgA
Ortholog function: Ammonium transporter
Lactococcus lactis subsp. cremoris SK11 LACR_1699 -138 6 ATGTTATGTTATATAACAT
-85 5.8 GTGTTATATTTTATGACAT
Lactococcus lactis subsp. lactis Il1403 L0236 -139 5.6 ATGTTATGTTTTGTGACAT
-86 5.6 GTGTTATATTTTATTACAT
Streptococcus gallolyticus UCN34 GALLO_1749 -101 6.3 ATGTTATATTATCTAACAT
Streptococcus mitis B6 smi_0683 -47 6 ATGTTATATTATCTAACAC
Streptococcus mutans UA159 SMU.1658 -203 5.6 ATGTTAAAAAACATAACAT
-39 6.3 ATGTTATATTATATAACAT
Streptococcus thermophilus CNRZ1066 str0494 -61 5.2 ATGTTAGAAAATAAAAAAT
-2 5.3 GTGTGATATTATTTAACAT
Position: -199
Score: 6
Sequence: ATGTCATAAAACCTAACAT
Locus tag: LACR_1923
LACR_1923 -199 6 ATGTCATAAAACCTAACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glnP
Ortholog function: Glutamine ABC transporter, permease and substrate-binding protein
Lactococcus lactis subsp. cremoris SK11 LACR_1923 -199 6 ATGTCATAAAACCTAACAT
Streptococcus agalactiae 2603V/R SAG1466 -93 5.7 ATGTTACGTTTTCTAACAT
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_1312 -97 5.8 ATGTTAGGTTTTATGACAT
Streptococcus equi subsp. zooepidemicus MGCS10565 Sez_1274 -123 5.8 ATGTTAGGTTTTATGACAT
Streptococcus gallolyticus UCN34 GALLO_1405 -93 5.9 ATGTTAGGTTTTCTAACAT
Streptococcus gordonii str. Challis substr. CH1 SGO_1037 -91 6 ATGTCATATAACCTAACAT
Streptococcus mitis B6 smi_1203 -92 5.8 ATGTTATATTTTCTGACAC
Streptococcus mutans UA159 SMU.806c -106 5.7 ATGTTATATTTCCTTACAT
Streptococcus pneumoniae TIGR4 SP_1241 -92 5.8 ATGTTATATTTTCTGACAC
Streptococcus pyogenes M1 GAS SPy1315 -98 5.9 ATGTTATGTTTTATGACAT
Streptococcus sanguinis SK36 SSA_1359 -90 6.2 ATGTCAGAAAATCTAACAT
Streptococcus suis 05ZYH33 SSU05_1026 -92 6 ATGTCAGAAATTCTGACAT
Streptococcus suis 05ZYH33 SSU05_1027 -92 6 ATGTCAGAAATTCTGACAT
Streptococcus thermophilus CNRZ1066 str1501 -96 5.7 TTGTTATATTTTATAACAT
Streptococcus uberis 0140J SUB1152 -91 6.2 ATGTTATATTTTCTAACAT
Position: -74
Score: 5.6
Sequence: ATGTGAGAAAATCTCACAT
Locus tag: LACR_2513
LACR_2513 -74 5.6 ATGTGAGAAAATCTCACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glnR
Ortholog function: Nitrogen metabolism transcriptional regulator GlnR, MerR family
Lactococcus lactis subsp. cremoris SK11 LACR_2513 -74 5.6 ATGTGAGAAAATCTCACAT
Lactococcus lactis subsp. lactis Il1403 L67158 -77 5.6 ATGTGAGAAAATCTCACAT
Streptococcus agalactiae 2603V/R SAG1764 -75 5.9 ATGTCATAAAATCTCACAT
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_1932 -77 6.1 ATGTTAGATAATATGACAT
Streptococcus gallolyticus UCN34 GALLO_1993 -75 5.8 ATGTCATATTTTCTTACAT
Streptococcus gordonii str. Challis substr. CH1 SGO_0214 -286 5.5 ATGTCAGAAAAAGTAACAT
Streptococcus mitis B6 smi_0348 -77 5.9 ATGTTACATTTTATAACAT
Streptococcus mutans UA159 SMU.363 -76 5.8 ATGTCAGGAAATATGACAT
Streptococcus pneumoniae TIGR4 SP_0501 -77 5.9 ATGTTACATTTTATAACAT
Streptococcus pyogenes M1 GAS SPy1878 -77 6.2 ATGTTAGATAATATAACAT
Streptococcus sanguinis SK36 SSA_0306 -75 5.8 GTGTAAGAAAATCTAACAT
Streptococcus thermophilus CNRZ1066 str1777 -75 5 GTGTAAGAAAAAGTGACAT
Streptococcus uberis 0140J SUB1627 -76 5.8 ATGTCAGAAAATGTGACAT
© 2009-2020 RegPrecise