Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of GlnR regulog to Lactococcus lactis subsp. lactis Il1403

Reference regulog properties
Source regulog: GlnR - Streptococcaceae
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: repressor
Biological process: Nitrogen assimilation
Effector: Phosphorylated NtrB, signal histidine kinase
Phylum: Firmicutes
Propagated regulon:
Target genome Lactococcus lactis subsp. lactis Il1403
Orthologous TF(s) L67158
Regulated genes 3
Built upon 66 sites [see more]
Predicted regulatory interactions in Lactococcus lactis subsp. lactis Il1403
Locus tag Position Score Sequence
Position: -139
Score: 5.6
Sequence: ATGTTATGTTTTGTGACAT
Position: -86
Score: 5.6
Sequence: GTGTTATATTTTATTACAT
Locus tag: L0236
L0236 -139 5.6 ATGTTATGTTTTGTGACAT
-86 5.6 GTGTTATATTTTATTACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nrgA
Ortholog function: Ammonium transporter
Lactococcus lactis subsp. cremoris SK11 LACR_1699 -138 6 ATGTTATGTTATATAACAT
-85 5.8 GTGTTATATTTTATGACAT
Lactococcus lactis subsp. lactis Il1403 L0236 -139 5.6 ATGTTATGTTTTGTGACAT
-86 5.6 GTGTTATATTTTATTACAT
Streptococcus gallolyticus UCN34 GALLO_1749 -101 6.3 ATGTTATATTATCTAACAT
Streptococcus mitis B6 smi_0683 -47 6 ATGTTATATTATCTAACAC
Streptococcus mutans UA159 SMU.1658 -203 5.6 ATGTTAAAAAACATAACAT
-39 6.3 ATGTTATATTATATAACAT
Streptococcus thermophilus CNRZ1066 str0494 -61 5.2 ATGTTAGAAAATAAAAAAT
-2 5.3 GTGTGATATTATTTAACAT
Position: -207
Score: 6
Sequence: ATGTCAGAAAACCTAACAT
Locus tag: L165
L165 -207 6 ATGTCAGAAAACCTAACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glnP
Ortholog function: Glutamine ABC transporter, permease and substrate-binding protein
Lactococcus lactis subsp. lactis Il1403 L165 -207 6 ATGTCAGAAAACCTAACAT
Position: -77
Score: 5.6
Sequence: ATGTGAGAAAATCTCACAT
Locus tag: L67158
L67158 -77 5.6 ATGTGAGAAAATCTCACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glnR
Ortholog function: Nitrogen metabolism transcriptional regulator GlnR, MerR family
Lactococcus lactis subsp. cremoris SK11 LACR_2513 -74 5.6 ATGTGAGAAAATCTCACAT
Lactococcus lactis subsp. lactis Il1403 L67158 -77 5.6 ATGTGAGAAAATCTCACAT
Streptococcus agalactiae 2603V/R SAG1764 -75 5.9 ATGTCATAAAATCTCACAT
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_1932 -77 6.1 ATGTTAGATAATATGACAT
Streptococcus gallolyticus UCN34 GALLO_1993 -75 5.8 ATGTCATATTTTCTTACAT
Streptococcus gordonii str. Challis substr. CH1 SGO_0214 -286 5.5 ATGTCAGAAAAAGTAACAT
Streptococcus mitis B6 smi_0348 -77 5.9 ATGTTACATTTTATAACAT
Streptococcus mutans UA159 SMU.363 -76 5.8 ATGTCAGGAAATATGACAT
Streptococcus pneumoniae TIGR4 SP_0501 -77 5.9 ATGTTACATTTTATAACAT
Streptococcus pyogenes M1 GAS SPy1878 -77 6.2 ATGTTAGATAATATAACAT
Streptococcus sanguinis SK36 SSA_0306 -75 5.8 GTGTAAGAAAATCTAACAT
Streptococcus thermophilus CNRZ1066 str1777 -75 5 GTGTAAGAAAAAGTGACAT
Streptococcus uberis 0140J SUB1627 -76 5.8 ATGTCAGAAAATGTGACAT
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