Propagation of CodY regulog to Lactococcus lactis subsp. cremoris MG1363
| Source regulog: | CodY - Streptococcaceae |
| Regulator type: | Transcription factor |
| Regulator family: | CodY |
| Regulation mode: | repressor (activator) |
| Biological process: | Amino acid metabolism |
| Effector: | Guanosine triphosphate; Branched-chain amino acids |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Lactococcus lactis subsp. cremoris MG1363 |
| Orthologous TF(s) | llmg_0172, llmg_1983 |
| Regulated genes | 13 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -101
Score: 5.4 Sequence: AATTTTCTGACAATT
Locus tag: llmg_0172
|
||||
| llmg_0172 | -101 | 5.4 | AATTTTCTGACAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: codY | ||||
| Ortholog function: Nutrient limitation global transcriptional regulator CodY, CodY family | ||||
| Lactococcus lactis subsp. cremoris SK11 | LACR_0168 | -101 | 5.4 | AATTTTCTGACAATT |
| Lactococcus lactis subsp. lactis Il1403 | L0243 | -101 | 5.4 | AATTTTCTGACAATT |
| Streptococcus agalactiae 2603V/R | SAG1675 | -46 | 5 | AATTTTGAGAATATT |
| Streptococcus dysgalactiae subsp. equisimilis GGS_124 | SDEG_1848 | -80 | 5.6 | AATTTTCTGATAATT |
| Streptococcus equi subsp. zooepidemicus MGCS10565 | Sez_0387 | -78 | 5.6 | AATTTTCTGATAATT |
| Streptococcus gallolyticus UCN34 | GALLO_1876 | -77 | 5.6 | AATTTTCAGATAATT |
| Streptococcus gordonii str. Challis substr. CH1 | SGO_0431 | -71 | 5.6 | AATTTTCAGATAATT |
| Streptococcus mitis B6 | smi_0687 | -71 | 5.6 | AATTTTCAGATAATT |
| Streptococcus mutans UA159 | SMU.1824c | -75 | 5.4 | AATTTTCTGACAATT |
| Streptococcus pneumoniae TIGR4 | SP_1584 | -71 | 5.6 | AATTTTCAGATAATT |
| Streptococcus pyogenes M1 GAS | SPy1777 | -80 | 5.6 | AATTTTCTGATAATT |
| Streptococcus sanguinis SK36 | SSA_0566 | -71 | 5.6 | AATTTTCAGATAATT |
| Streptococcus suis 05ZYH33 | SSU05_0350 | -74 | 5.3 | AATATTCTGATAATT |
| Streptococcus thermophilus CNRZ1066 | str1635 | -132 | 5.4 | AATTTTCAGACAATT |
| Streptococcus uberis 0140J | SUB1528 | -82 | 5.6 | AATTTTCTGATAATT |
|
Position: -123
Score: 5.1 Sequence: AATTGTCAGAAAAAT
Position: -55
Score: 5.2 Sequence: AATTTTCAGAATAAT
Position: -46
Score: 5 Sequence: AATAATTAGAAAATT
Locus tag: llmg_0362
|
||||
| llmg_0362 | -123 | 5.1 | AATTGTCAGAAAAAT | |
| -55 | 5.2 | AATTTTCAGAATAAT | ||
| -46 | 5 | AATAATTAGAAAATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: oppA1 | ||||
| Ortholog function: Oligopeptide ABC transporter, substrate-binding protein (TC 3.A.1.5.1) | ||||
| Lactococcus lactis subsp. cremoris SK11 | LACR_0389 | -123 | 5.1 | AATTGTCAGAAAAAT |
| -55 | 5.2 | AATTTTCAGAATAAT | ||
| Lactococcus lactis subsp. cremoris SK11 | LACR_0390 | -129 | 4.7 | AATTTTCAGAAAACA |
| -61 | 5 | AATTTTCTGACAATA | ||
| Lactococcus lactis subsp. lactis Il1403 | L143312 | -123 | 5.2 | AATTATCAGAAAAAT |
| -55 | 5.2 | AATTTTCAGAATAAT | ||
| Lactococcus lactis subsp. lactis Il1403 | L145267 | -129 | 4.7 | AATTTTCAGAAAACA |
| -61 | 5 | AATTTTCTGACAATA | ||
|
Position: -59
Score: 5.6 Sequence: AATTATCAGAAAATT
Locus tag: llmg_0565
|
||||
| llmg_0565 | -59 | 5.6 | AATTATCAGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: serC | ||||
| Ortholog function: Phosphoserine aminotransferase (EC 2.6.1.52) | ||||
| Lactococcus lactis subsp. cremoris SK11 | LACR_0619 | -59 | 5.6 | AATTATCAGAAAATT |
| Lactococcus lactis subsp. lactis Il1403 | L0083 | -59 | 5.6 | AATTATCAGAAAATT |
| Streptococcus gallolyticus UCN34 | GALLO_1746 | -51 | 5.3 | AAAATTCAGAAAATT |
| Streptococcus mutans UA159 | SMU.1656 | -50 | 5.3 | AAAATTCTGAAAATT |
| Streptococcus suis 05ZYH33 | SSU05_0665 | -54 | 5.2 | AATTGTCTGAATATT |
| Streptococcus uberis 0140J | SUB0445 | -53 | 5.3 | AAAATTCTGAAAATT |
|
Position: -61
Score: 5.1 Sequence: AATATTCAGAAAATA
Locus tag: llmg_0910
|
||||
| llmg_0910 | -61 | 5.1 | AATATTCAGAAAATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nrgA | ||||
| Ortholog function: Ammonium transporter | ||||
| Lactococcus lactis subsp. cremoris SK11 | LACR_1699 | -61 | 5.1 | AATATTCAGAAAATA |
| Lactococcus lactis subsp. lactis Il1403 | L0236 | -62 | 5 | AATTGTCAGAAAATA |
| Streptococcus gallolyticus UCN34 | GALLO_1749 | -148 | 5 | AAAATTTAGAAAATT |
| Streptococcus mitis B6 | smi_0683 | -93 | 5.2 | AATTATCAAAAAATT |
| Streptococcus mutans UA159 | SMU.1658 | -85 | 5.5 | AATTTTTAGAAAATT |
| Streptococcus thermophilus CNRZ1066 | str0494 | -45 | 5.2 | AATTATCAAAAAATT |
|
Position: -97
Score: 4.8 Sequence: AATTGTTTGAAATTT
Locus tag: llmg_1181
|
||||
| llmg_1181 | -97 | 4.8 | AATTGTTTGAAATTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ilvE | ||||
| Ortholog function: Branched-chain amino acid aminotransferase (EC 2.6.1.42) | ||||
| Lactococcus lactis subsp. cremoris SK11 | LACR_1409 | -97 | 4.8 | AATTGTTTGAAATTT |
| Streptococcus agalactiae 2603V/R | SAG1152 | -83 | 4.7 | ATTTATCTGAATTTT |
| Streptococcus gallolyticus UCN34 | GALLO_0979 | -84 | 5.3 | AATTTTCAGAATTTT |
| Streptococcus gordonii str. Challis substr. CH1 | SGO_1238 | -99 | 5.8 | AATTTTCTGAAAATT |
| Streptococcus mitis B6 | smi_0906 | -88 | 5.8 | AATTTTCTGAAAATT |
| Streptococcus mutans UA159 | SMU.1203 | -83 | 5.3 | AATTTTCAGAATTTT |
| Streptococcus pneumoniae TIGR4 | SP_0856 | -88 | 5.8 | AATTTTCTGAAAATT |
| Streptococcus pyogenes M1 GAS | SPy0911 | -102 | 4.6 | AATTTTATGATAAAT |
| Streptococcus sanguinis SK36 | SSA_1225 | -98 | 5.8 | AATTTTCTGAAAATT |
| Streptococcus thermophilus CNRZ1066 | str0590 | -90 | 4.9 | AATTGTCAGAATTTT |
| Streptococcus uberis 0140J | SUB1010 | -88 | 4.8 | AATATTCCGAATATT |
|
Position: -80
Score: 4.9 Sequence: AATTATCAGAATATA
Locus tag: llmg_1183
|
||||
| llmg_1183 | -80 | 4.9 | AATTATCAGAATATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gltB | ||||
| Ortholog function: Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | ||||
| Lactococcus lactis subsp. cremoris SK11 | LACR_1407 | -80 | 4.9 | AATTATCAGAATATA |
| Lactococcus lactis subsp. lactis Il1403 | L0119 | -80 | 4.7 | AATTGTCAGAATATA |
| Streptococcus gallolyticus UCN34 | GALLO_1991 | -59 | 5 | AATATTCTGAATAAT |
| Streptococcus mutans UA159 | SMU.365 | -108 | 5.3 | AATTTTCAGAATTTT |
|
Position: -309
Score: 4.7 Sequence: ATAATTCAGATAATT
Locus tag: llmg_1298
|
||||
| llmg_1298 | -309 | 4.7 | ATAATTCAGATAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hisC | ||||
| Ortholog function: Histidinol-phosphate aminotransferase (EC 2.6.1.9) | ||||
| Lactococcus lactis subsp. cremoris SK11 | LACR_1336 | -309 | 4.7 | ATAATTCAGATAATT |
| Lactococcus lactis subsp. lactis Il1403 | L0065 | -299 | 4.7 | ATAATTCAGATAATT |
| Streptococcus mutans UA159 | SMU.1273 | -310 | 5.1 | AATATTCAGAATTTT |
|
Position: -71
Score: 5.6 Sequence: AATTATCTGAAAATT
Locus tag: llmg_1820
|
||||
| llmg_1820 | -71 | 5.6 | AATTATCTGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: thrA | ||||
| Ortholog function: Aspartokinase (EC 2.7.2.4) | ||||
| Lactococcus lactis subsp. cremoris SK11 | LACR_0783 | -71 | 5.6 | AATTATCTGAAAATT |
| Lactococcus lactis subsp. lactis Il1403 | L0097 | -70 | 5.6 | AATTATCTGAAAATT |
| Streptococcus agalactiae 2603V/R | SAG0339 | -52 | 4.9 | AATTTTCTGACTTTT |
| Streptococcus gallolyticus UCN34 | GALLO_0331 | -52 | 5.3 | AATTTTCAGAATTTT |
| Streptococcus gordonii str. Challis substr. CH1 | SGO_1701 | -38 | 4.5 | AATTGTTTGAATAAT |
| Streptococcus mutans UA159 | SMU.1748 | -53 | 5.3 | AATTTTCTGAATTTT |
| Streptococcus sanguinis SK36 | SSA_1943 | -47 | 5.3 | AATTTTCAGAATTTT |
| Streptococcus suis 05ZYH33 | SSU05_1811 | -123 | 4.6 | GTTTTTCTGAAATTT |
| Streptococcus thermophilus CNRZ1066 | str0378 | -56 | 5.1 | AATTATCAGAATTTT |
| Streptococcus uberis 0140J | SUB0316 | -26 | 5 | AATATTCATAAAATT |
|
Position: -71
Score: 4.8 Sequence: ATTTTTTTGATAATT
Locus tag: llmg_2069
|
||||
| llmg_2069 | -71 | 4.8 | ATTTTTTTGATAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pepC | ||||
| Ortholog function: Aminopeptidase C (EC 3.4.22.40) | ||||
| Lactococcus lactis subsp. cremoris SK11 | LACR_2073 | -125 | 4.8 | ATTTTTTTGATAATT |
| Lactococcus lactis subsp. lactis Il1403 | L130687 | -125 | 4.8 | ATTTTTTTGATAATT |
| Streptococcus agalactiae 2603V/R | SAG0297 | -48 | 4.8 | AATATTCAGAATGTT |
| Streptococcus gallolyticus UCN34 | GALLO_0478 | -125 | 4.7 | AAATGTCAGAATTTT |
| Streptococcus thermophilus CNRZ1066 | str0229 | -57 | 5.1 | AATTTTCAGAAATTA |