Propagation of CodY regulog to Streptococcus suis 05ZYH33

Reference regulog properties
Source regulog:	CodY - Streptococcaceae
Regulator type:	Transcription factor
Regulator family:	CodY
Regulation mode:	repressor (activator)
Biological process:	Amino acid metabolism
Effector:	Guanosine triphosphate; Branched-chain amino acids
Phylum:	Firmicutes
Propagated regulon:
Target genome	Streptococcus suis 05ZYH33
Orthologous TF(s)	SSU05_0350
Regulated genes	16

Built upon 273 sites [see more]

Predicted regulatory interactions in *Streptococcus suis 05ZYH33*
	Locus tag	Position	Score	Sequence
Position: -305 Score: 4.5 Sequence: ATTTTTTTGAGAATT Position: -276 Score: 4.6 Sequence: AAGATTCTAAAAATT Locus tag: SSU05_0121
	SSU05_0121	-305	4.5	ATTTTTTTGAGAATT
		-276	4.6	AAGATTCTAAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: rpoB
Ortholog function: DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)
Streptococcus agalactiae 2603V/R	SAG0160	-128	5.2	AACTTTCTGAAAATT
Streptococcus dysgalactiae subsp. equisimilis GGS_124	SDEG_0131	-91	4.6	AAGATTCTAAAAATT
Streptococcus gallolyticus UCN34	GALLO_0084	-165	4.6	AAGATTCTAAAAATT
Streptococcus gordonii str. Challis substr. CH1	SGO_1927	-222	5.4	ATTTTTCTGAAAATT
Streptococcus mitis B6	smi_1847	-113	5	AAGATTCTGAAAATT
Streptococcus mutans UA159	SMU.1990	-84	5.3	AAAATTCTGAAAATT
Streptococcus pneumoniae TIGR4	SP_1961	-112	5	AAGATTCTGAAAATT
Streptococcus pyogenes M1 GAS	SPy0098	-91	5.2	AATATTCTAAAAATT
Streptococcus suis 05ZYH33	SSU05_0121	-276	4.6	AAGATTCTAAAAATT
Streptococcus thermophilus CNRZ1066	str1868	-171	4.6	AAAGTTCTAAAAATT
Streptococcus uberis 0140J	SUB0115	-90	4.6	AAGATTCTAAAAATT

Position: -62 Score: 4.9 Sequence: AATTATCAGATAAAT Position: -45 Score: 5.1 Sequence: AATTGTCAGACAATT Locus tag: SSU05_0252
	SSU05_0252	-62	4.9	AATTATCAGATAAAT
		-45	5.1	AATTGTCAGACAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gdhA
Ortholog function: NADP-specific glutamate dehydrogenase (EC 1.4.1.4)
Streptococcus agalactiae 2603V/R	SAG1335	-55	4.9	AAAATTCTGACAATT
Streptococcus dysgalactiae subsp. equisimilis GGS_124	SDEG_0823	-61	5.3	AAAATTCAGAAAATT
Streptococcus equi subsp. zooepidemicus MGCS10565	Sez_1090	-65	5.3	AAAATTCAGAAAATT
Streptococcus gallolyticus UCN34	GALLO_1293	-78	5.8	AATTTTCAGAAAATT
Streptococcus gordonii str. Challis substr. CH1	SGO_0276	-95	5.8	AATTTTCAGAAAATT
Streptococcus mitis B6	smi_0814	-95	5.5	AATTTTTAGAAAATT
Streptococcus mutans UA159	SMU.913	-68	5.6	AATATTCAGAAAATT
Streptococcus pneumoniae TIGR4	SP_1306	-94	5.5	AATTTTTAGAAAATT
Streptococcus sanguinis SK36	SSA_0371	-182	5.5	AATTTTTAGAAAATT
Streptococcus suis 05ZYH33	SSU05_0252	-45	5.1	AATTGTCAGACAATT
Streptococcus thermophilus CNRZ1066	str0430	-52	5	AAGATTCTGAAAATT
Streptococcus uberis 0140J	SUB0762	-60	5.6	AATATTCTGAAAATT

Position: -173 Score: 5.1 Sequence: ATTTTTTTGAAAATT Locus tag: SSU05_0279
	SSU05_0279	-173	5.1	ATTTTTTTGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: adhB1
Ortholog function: Alcohol dehydrogenase (EC 1.1.1.1)
Streptococcus agalactiae 2603V/R	SAG0054	-100	5.2	AATTTTCTGAAAATC
Streptococcus dysgalactiae subsp. equisimilis GGS_124	SDEG_0062	-113	5.2	AATTTTCAGAAAACT
Streptococcus gordonii str. Challis substr. CH1	SGO_0565	-282	5.4	AATTGTCTGAAAATT
Streptococcus suis 05ZYH33	SSU05_0279	-173	5.1	ATTTTTTTGAAAATT

Position: -56 Score: 4.8 Sequence: AATTTTCTGTCAATT Locus tag: SSU05_0281
	SSU05_0281	-56	4.8	AATTTTCTGTCAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: thrC
Ortholog function: Threonine synthase (EC 4.2.3.1)
Streptococcus agalactiae 2603V/R	SAG0055	-100	5.2	AATTTTCTGAAAATC
Streptococcus dysgalactiae subsp. equisimilis GGS_124	SDEG_0063	-113	5.2	AATTTTCAGAAAACT
Streptococcus gallolyticus UCN34	GALLO_0042	-61	5.6	AATTTTCTGATAATT
Streptococcus gordonii str. Challis substr. CH1	SGO_0139	-57	5.2	AATTTTCTGATAAAT
Streptococcus mitis B6	smi_0193	-57	5.4	AATTTTCTGAAAAAT
Streptococcus mutans UA159	SMU.70	-59	5.2	AATTGTCTGATAATT
Streptococcus pneumoniae TIGR4	SP_2066	-57	5.4	AATTTTCTGAAAAAT
Streptococcus sanguinis SK36	SSA_0095	-57	5.2	AATTTTCTGATAAAT
Streptococcus suis 05ZYH33	SSU05_0281	-56	4.8	AATTTTCTGTCAATT
Streptococcus thermophilus CNRZ1066	str1878	-59	5.4	AATTTTCTGACAATT

Position: -74 Score: 5.3 Sequence: AATATTCTGATAATT Locus tag: SSU05_0350
	SSU05_0350	-74	5.3	AATATTCTGATAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: codY
Ortholog function: Nutrient limitation global transcriptional regulator CodY, CodY family
Lactococcus lactis subsp. cremoris SK11	LACR_0168	-101	5.4	AATTTTCTGACAATT
Lactococcus lactis subsp. lactis Il1403	L0243	-101	5.4	AATTTTCTGACAATT
Streptococcus agalactiae 2603V/R	SAG1675	-46	5	AATTTTGAGAATATT
Streptococcus dysgalactiae subsp. equisimilis GGS_124	SDEG_1848	-80	5.6	AATTTTCTGATAATT
Streptococcus equi subsp. zooepidemicus MGCS10565	Sez_0387	-78	5.6	AATTTTCTGATAATT
Streptococcus gallolyticus UCN34	GALLO_1876	-77	5.6	AATTTTCAGATAATT
Streptococcus gordonii str. Challis substr. CH1	SGO_0431	-71	5.6	AATTTTCAGATAATT
Streptococcus mitis B6	smi_0687	-71	5.6	AATTTTCAGATAATT
Streptococcus mutans UA159	SMU.1824c	-75	5.4	AATTTTCTGACAATT
Streptococcus pneumoniae TIGR4	SP_1584	-71	5.6	AATTTTCAGATAATT
Streptococcus pyogenes M1 GAS	SPy1777	-80	5.6	AATTTTCTGATAATT
Streptococcus sanguinis SK36	SSA_0566	-71	5.6	AATTTTCAGATAATT
Streptococcus suis 05ZYH33	SSU05_0350	-74	5.3	AATATTCTGATAATT
Streptococcus thermophilus CNRZ1066	str1635	-132	5.4	AATTTTCAGACAATT
Streptococcus uberis 0140J	SUB1528	-82	5.6	AATTTTCTGATAATT

Position: -63 Score: 4.6 Sequence: AAAAATCAGAAAATA Locus tag: SSU05_0596
	SSU05_0596	-63	4.6	AAAAATCAGAAAATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: aroA
Ortholog function: 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)
Streptococcus gallolyticus UCN34	GALLO_1433	-56	4.6	AATTTTCAGTTATTT
Streptococcus mutans UA159	SMU.784	-61	5.2	AATTTTCTAAAATTT
Streptococcus suis 05ZYH33	SSU05_0596	-63	4.6	AAAAATCAGAAAATA
Streptococcus suis 05ZYH33	SSU05_0597	-63	4.6	AAAAATCAGAAAATA
Streptococcus suis 05ZYH33	SSU05_0598	-63	4.6	AAAAATCAGAAAATA
Streptococcus thermophilus CNRZ1066	str0645	-81	4.9	AATATTTTGACAATT

Position: -54 Score: 5.2 Sequence: AATTGTCTGAATATT Locus tag: SSU05_0665
	SSU05_0665	-54	5.2	AATTGTCTGAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: serC
Ortholog function: Phosphoserine aminotransferase (EC 2.6.1.52)
Lactococcus lactis subsp. cremoris SK11	LACR_0619	-59	5.6	AATTATCAGAAAATT
Lactococcus lactis subsp. lactis Il1403	L0083	-59	5.6	AATTATCAGAAAATT
Streptococcus gallolyticus UCN34	GALLO_1746	-51	5.3	AAAATTCAGAAAATT
Streptococcus mutans UA159	SMU.1656	-50	5.3	AAAATTCTGAAAATT
Streptococcus suis 05ZYH33	SSU05_0665	-54	5.2	AATTGTCTGAATATT
Streptococcus uberis 0140J	SUB0445	-53	5.3	AAAATTCTGAAAATT

Position: -52 Score: 5 Sequence: AATAGTCAGAATATT Locus tag: SSU05_0801
	SSU05_0801	-52	5	AATAGTCAGAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hom
Ortholog function: Homoserine dehydrogenase (EC 1.1.1.3)
Lactococcus lactis subsp. lactis Il1403	L0090	-41	4.9	AATTATCTTAAAATT
Streptococcus gallolyticus UCN34	GALLO_1241	-118	4.8	ATTTTTCTGTAAATT
Streptococcus mitis B6	smi_0773	-56	5.2	AATTTTCACAAAATT
Streptococcus pneumoniae TIGR4	SP_1361	-56	5.2	AATTTTCACAAAATT
Streptococcus suis 05ZYH33	SSU05_0801	-52	5	AATAGTCAGAATATT
Streptococcus thermophilus CNRZ1066	str0469	-70	4.6	AATATTCTGTCAATT

Position: -146 Score: 5.1 Sequence: AATTTTCAGAATATA Locus tag: SSU05_0811
	SSU05_0811	-146	5.1	AATTTTCAGAATATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: scpC
Ortholog function: Serine endopeptidase ScpC (EC 3.4.21.-)
Streptococcus suis 05ZYH33	SSU05_0811	-146	5.1	AATTTTCAGAATATA

Position: -73 Score: 5.3 Sequence: TATTTTCAGAAAATT Locus tag: SSU05_1547
	SSU05_1547	-73	5.3	TATTTTCAGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: livH
Ortholog function: Branched-chain amino acids ABC transporter, permease protein 1 (TC 3.A.1.4.1)
Streptococcus agalactiae 2603V/R	SAG1581	-56	5.3	AATATTCTGATAATT
Streptococcus dysgalactiae subsp. equisimilis GGS_124	SDEG_0444	-98	4.9	ATTTTTCAAAATATT
		-65	5.6	AATTTTCTGATAATT
Streptococcus gallolyticus UCN34	GALLO_1759	-66	5.6	AATTTTCTGATAATT
Streptococcus gordonii str. Challis substr. CH1	SGO_1629	-66	5.6	AATTTTCTGATAATT
Streptococcus mitis B6	smi_1414	-61	5.6	AATTTTCTGATAATT
Streptococcus mutans UA159	SMU.1668	-66	5.3	AATATTCAGATAATT
Streptococcus pneumoniae TIGR4	SP_0750	-60	5.6	AATTTTCTGATAATT
Streptococcus sanguinis SK36	SSA_1728	-65	5.2	AATTGTCAGATAATT
Streptococcus suis 05ZYH33	SSU05_1547	-117	4.9	AATTTTCTGTAATTT
		-73	5.3	TATTTTCAGAAAATT
Streptococcus thermophilus CNRZ1066	str0360	-65	5.6	AATTTTCTGATAATT
Streptococcus uberis 0140J	SUB0433	-66	5.6	AATTTTCTGATAATT

Position: -64 Score: 5.6 Sequence: AATTTTCAGATAATT Locus tag: SSU05_1548
	SSU05_1548	-64	5.6	AATTTTCAGATAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: livK
Ortholog function: Branched-chain amino acids ABC transporter, substrate-binding protein (TC 3.A.1.4.1)
Streptococcus agalactiae 2603V/R	SAG1582	-56	5.3	AATATTCTGATAATT
Streptococcus dysgalactiae subsp. equisimilis GGS_124	SDEG_0443	-98	4.9	ATTTTTCAAAATATT
		-65	5.6	AATTTTCTGATAATT
Streptococcus gallolyticus UCN34	GALLO_1760	-66	5.6	AATTTTCTGATAATT
Streptococcus gordonii str. Challis substr. CH1	SGO_1630	-66	5.6	AATTTTCTGATAATT
Streptococcus mitis B6	smi_1415	-61	5.6	AATTTTCTGATAATT
Streptococcus mutans UA159	SMU.1669	-66	5.3	AATATTCAGATAATT
Streptococcus pneumoniae TIGR4	SP_0749	-60	5.6	AATTTTCTGATAATT
Streptococcus sanguinis SK36	SSA_1729	-65	5.2	AATTGTCAGATAATT
Streptococcus suis 05ZYH33	SSU05_1548	-64	5.6	AATTTTCAGATAATT
Streptococcus thermophilus CNRZ1066	str0359	-65	5.6	AATTTTCTGATAATT
Streptococcus uberis 0140J	SUB0432	-66	5.6	AATTTTCTGATAATT

Position: -123 Score: 4.6 Sequence: GTTTTTCTGAAATTT Locus tag: SSU05_1811
	SSU05_1811	-123	4.6	GTTTTTCTGAAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: thrA
Ortholog function: Aspartokinase (EC 2.7.2.4)
Lactococcus lactis subsp. cremoris SK11	LACR_0783	-71	5.6	AATTATCTGAAAATT
Lactococcus lactis subsp. lactis Il1403	L0097	-70	5.6	AATTATCTGAAAATT
Streptococcus agalactiae 2603V/R	SAG0339	-52	4.9	AATTTTCTGACTTTT
Streptococcus gallolyticus UCN34	GALLO_0331	-52	5.3	AATTTTCAGAATTTT
Streptococcus gordonii str. Challis substr. CH1	SGO_1701	-38	4.5	AATTGTTTGAATAAT
Streptococcus mutans UA159	SMU.1748	-53	5.3	AATTTTCTGAATTTT
Streptococcus sanguinis SK36	SSA_1943	-47	5.3	AATTTTCAGAATTTT
Streptococcus suis 05ZYH33	SSU05_1811	-123	4.6	GTTTTTCTGAAATTT
Streptococcus thermophilus CNRZ1066	str0378	-56	5.1	AATTATCAGAATTTT
Streptococcus uberis 0140J	SUB0316	-26	5	AATATTCATAAAATT

Position: -306 Score: 5.4 Sequence: ATTTTTCAGAAAATT Locus tag: SSU05_1949
	SSU05_1949	-306	5.4	ATTTTTCAGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: leuA
Ortholog function: 2-isopropylmalate synthase (EC 2.3.3.13)
Streptococcus gallolyticus UCN34	GALLO_0758	-266	5	AGTATTCAGAAAATT
Streptococcus mitis B6	smi_1218	-259	5.3	AATTTTCAGAAAATA
Streptococcus mutans UA159	SMU.1384	-246	5.4	ATTTTTCAGAAAATT
Streptococcus sanguinis SK36	SSA_0975	-269	5.3	AATTTTCAGAAAATA

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of CodY regulog to Streptococcus suis 05ZYH33

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --