Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of CcpA regulog to Streptococcus thermophilus LMD-9

Reference regulog properties
Source regulog: CcpA - Streptococcaceae
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode:
Biological process: Global catabolite repression
Effector: Fructose-1,6-bisphosphate; HPr, phosphocarrier protein
Phylum: Firmicutes
Propagated regulon:
Target genome Streptococcus thermophilus LMD-9
Orthologous TF(s) STER_0679
Regulated genes 39
Built upon 968 sites [see more]
Predicted regulatory interactions in Streptococcus thermophilus LMD-9
Locus tag Position Score Sequence
Position: -316
Score: 3.8
Sequence: AAGATATCGCTAAAAT
Position: -62
Score: 4.1
Sequence: AAAATAGCGTTTTTAA
Position: 0
Score: 4.5
Sequence: ATGAAAGCGATTATTA
Locus tag: STER_0156
STER_0156 -316 3.8 AAGATATCGCTAAAAT
-62 4.1 AAAATAGCGTTTTTAA
0 4.5 ATGAAAGCGATTATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SP_0238
Ortholog function: Predicted transcriptional regulator, ACT family
Streptococcus equi subsp. zooepidemicus MGCS10565 Sez_0395 -144 4 TAATAAACGGTATCAA
Streptococcus gallolyticus UCN34 GALLO_0236 0 3.9 ATGAAAGCAATTATTA
Streptococcus pneumoniae TIGR4 SP_0238 0 4.1 ATGAAAGCCATTATAA
Streptococcus thermophilus CNRZ1066 str0112 -62 4.1 AAAATAGCGTTTTTAA
Position: -140
Score: 4.5
Sequence: ATGATAACGCTTTATA
Locus tag: STER_0372
STER_0372 -140 4.5 ATGATAACGCTTTATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: manL
Ortholog function: PTS system, mannose-specific IIAB components
Lactococcus lactis subsp. cremoris SK11 LACR_1863 -87 4.3 ATGAAAACATTTGCAA
Lactococcus lactis subsp. lactis Il1403 L1762179 -87 4.3 ATGAAAACATTTGCAA
Streptococcus agalactiae 2603V/R SAG0361 -130 4.7 CTGAAAACGTTTTAAA
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_1806 -131 4.4 GTGAAAACGTTTTAAA
Streptococcus equi subsp. zooepidemicus MGCS10565 Sez_0423 -131 4.4 GTGAAAACGTTTTAAA
Streptococcus gallolyticus UCN34 GALLO_0350 -128 4.5 TTGAAAACGTTTTACA
Streptococcus gordonii str. Challis substr. CH1 SGO_1679 -80 4.6 CTGAAAACGTTTTATA
Streptococcus mitis B6 smi_0274 -124 4.2 ATTTAAATGTTTTCTT
-77 4.6 ATGAAAACGGTTTATA
Streptococcus mutans UA159 SMU.1877 -105 4.4 ATGTAAACGTTTTACA
Streptococcus pneumoniae TIGR4 SP_0284 -68 4.6 ATGAAAACGGTTTATA
Streptococcus pyogenes M1 GAS SPy1738 -131 4.4 GTGAAAACGTTTTAAA
Streptococcus sanguinis SK36 SSA_1918 -71 4.9 ATGAAAACGTTTTATA
Streptococcus suis 05ZYH33 SSU05_1778 -91 4.2 CTGTAATCGTTTTATA
-59 4.4 ATGAAAGCCCATTCAA
Streptococcus thermophilus CNRZ1066 str0333 -139 4.5 ATGATAACGCTTTATA
Streptococcus uberis 0140J SUB1482 -130 5 TTGAAAACGTTTTAAA
Position: -110
Score: 4.1
Sequence: ATGTAATCGATTACCA
Locus tag: STER_0398
STER_0398 -110 4.1 ATGTAATCGATTACCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: livJ
Ortholog function: Branched-chain amino acid ABC transporter, substrate-binding protein
Streptococcus gordonii str. Challis substr. CH1 SGO_1630 -109 4.5 AGGAAAACGTTATCAT
Streptococcus mitis B6 smi_1415 -103 4.5 AGGAAAACGTTATCAT
Streptococcus pneumoniae TIGR4 SP_0749 -102 4.5 AGGAAAACGTTATCAT
Streptococcus sanguinis SK36 SSA_1729 -108 4.9 AAGAAAACGTTATCAT
Streptococcus suis 05ZYH33 SSU05_1548 -45 4.4 TTGAAAACGGTATAAT
Streptococcus thermophilus CNRZ1066 str0359 -110 4.1 ATGTAATCGATTACCA
Position: -34
Score: 4.7
Sequence: AAGAAAACGCTAACAA
Locus tag: STER_0408
STER_0408 -34 4.7 AAGAAAACGCTAACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: raiA
Ortholog function: Ribosome-associated protein Y
Lactococcus lactis subsp. cremoris SK11 LACR_0667 -133 4.4 ATGAAAGCTGTTTCAT
Lactococcus lactis subsp. lactis Il1403 L32389 -133 4.4 ATGAAAGCTGTTTCAT
Streptococcus agalactiae 2603V/R SAG0338 -60 4.6 ATGAAAGCGGTTATAA
-36 4.7 TAGAAAGCGTTAACAA
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_1681 -64 4.5 ATGAAAGCGGTATAAT
-35 4.2 AAGAAAGCGCTTCAAG
Streptococcus equi subsp. zooepidemicus MGCS10565 Sez_1545 -36 4.9 AAGAAAGCGTTTTAAA
Streptococcus gallolyticus UCN34 GALLO_0504 -59 3.8 ATGAAAGCAGTATAAT
-34 4.8 AAGAAAGCGCTTTATA
Streptococcus gordonii str. Challis substr. CH1 SGO_0610 -63 4.7 ATGAAAGCGTTATAAT
Streptococcus mitis B6 smi_2056 -57 4.7 ATGAAAGCGTTATAAT
Streptococcus mutans UA159 SMU.500 -58 4.5 ATGAAAGCGATATAAT
Streptococcus pneumoniae TIGR4 SP_2206 -57 4.7 ATGAAAGCGTTATAAT
Streptococcus pyogenes M1 GAS SPy1613 -64 3.8 ATGAAAGCAGTATAAT
-35 4 AAGTAAGCGCTTCAAG
Streptococcus sanguinis SK36 SSA_1834 -60 4.7 ATGAAAGCGTTATAAT
Streptococcus suis 05ZYH33 SSU05_0439 -42 4.5 AAGAAAACGGTTGCAA
Streptococcus thermophilus CNRZ1066 str0370 -57 3.9 ATGAAAAGGATATAAT
-34 4.7 AAGAAAACGCTAACAA
Streptococcus uberis 0140J SUB1375 -59 4.4 ATGAAAACGGTATAAT
Position: -27
Score: 4.5
Sequence: TTGTAAACGATTACAG
Locus tag: STER_0444
STER_0444 -27 4.5 TTGTAAACGATTACAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: fruR
Ortholog function: Fructose utilization transcriptional regulator FruR, DeoR family
Lactococcus lactis subsp. cremoris SK11 LACR_1031 -25 4.2 TTGTAAACGAATTCAG
Lactococcus lactis subsp. lactis Il1403 L0031 -25 4.2 TTGTAAACGAATTCAG
Streptococcus agalactiae 2603V/R SAG1348 -30 4.7 TTGCAAACGATTTCAA
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_0811 -60 4.1 CTGTAACCGATTTCAG
Streptococcus equi subsp. zooepidemicus MGCS10565 Sez_1106 -62 4.4 CTGTAAACGATTTCAG
Streptococcus gallolyticus UCN34 GALLO_1319 -30 4.4 CTGTAAACGATTTCAG
Streptococcus gordonii str. Challis substr. CH1 SGO_1111 -27 4 ATGTAAGCTGTTTCAG
Streptococcus mutans UA159 SMU.870 22 4.4 GTGTAAACGATTTCAA
Streptococcus pyogenes M1 GAS SPy0853 -60 4.7 TTGTAAACGATTTCAG
Streptococcus suis 05ZYH33 SSU05_0822 14 4.2 TTGTAAACGGTTGCAG
Streptococcus thermophilus CNRZ1066 str0399 -109 3.8 AGGTTAGCGTTTTATA
-27 4.5 TTGTAAACGATTACAG
Streptococcus uberis 0140J SUB0748 -60 4.4 TTGTAACCGATTTCAG
Position: 19
Score: 4.1
Sequence: AAATTAGCGCTTTAAT
Locus tag: STER_0519
STER_0519 19 4.1 AAATTAGCGCTTTAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: atpA
Ortholog function: ATP synthase alpha chain (EC 3.6.3.14)
Lactococcus lactis subsp. cremoris SK11 LACR_1935 -135 4.3 TATCAAACGCTTACAA
Streptococcus agalactiae 2603V/R SAG0861 -93 4.5 ATGAAAACGTAATCAA
Streptococcus gordonii str. Challis substr. CH1 SGO_1544 -96 4.6 TTAAAATCGCTTACAA
Streptococcus mitis B6 smi_1311 -93 4.5 CATTAAACGCTTTCAA
Streptococcus mutans UA159 SMU.1530 -161 4.1 TTAAAAGCGTCTTCTA
Streptococcus pneumoniae TIGR4 SP_1510 -93 4.3 TATTAAACGCTTCCAA
Streptococcus sanguinis SK36 SSA_0786 -194 4.5 TTTTAATCGCTTTCTT
-95 4.4 CAAAAAACGCTTACAA
Streptococcus suis 05ZYH33 SSU05_1174 -92 4.7 AATTAAACGCTTACAA
Streptococcus uberis 0140J SUB0670 -94 4.4 AAGAAAGCGTAATCAA
Position: -106
Score: 4.4
Sequence: ATGAAATCGGTTATAT
Locus tag: STER_0596
STER_0596 -106 4.4 ATGAAATCGGTTATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: merA
Ortholog function: Mercuric ion reductase (EC 1.16.1.1)
Streptococcus gordonii str. Challis substr. CH1 SGO_1283 -122 3.8 CTCAAAACGTATACAT
Streptococcus pneumoniae TIGR4 SP_1588 -97 4.5 TGGAAAGCGTTTTTAT
Streptococcus suis 05ZYH33 SSU05_0692 -291 3.9 TTGCAACCGTTGACAA
Streptococcus thermophilus CNRZ1066 str0557 -106 4.4 ATGAAATCGGTTATAT
Position: -255
Score: 4.8
Sequence: TTGAAAACACTTTCAA
Position: -134
Score: 3.8
Sequence: TATTCATCGCTTACAA
Locus tag: STER_0678
STER_0678 -255 4.8 TTGAAAACACTTTCAA
-134 3.8 TATTCATCGCTTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: pepQ
Ortholog function: Xaa-Pro dipeptidase (EC 3.4.13.9)
Lactococcus lactis subsp. cremoris SK11 LACR_1813 -136 4.4 CTGTAAACCTTTTCAA
Lactococcus lactis subsp. lactis Il1403 L96847 -173 4.1 ATGAAAACCATTTTTA
-137 4.4 CTGTAAACCTTTTCAA
Streptococcus agalactiae 2603V/R SAG0706 -151 4.3 TTGGAAACACTTTCAA
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_0544 -151 4 AAAATTACGCTTTCAA
-117 4.3 TTGTAACCACTTTCAA
-84 4.6 TTGAAAAAGTTTTCAA
Streptococcus gordonii str. Challis substr. CH1 SGO_0771 -142 4.5 AAAATAACGTTTTCAT
-98 4.3 TTGGAAACACTTTCAA
Streptococcus mutans UA159 SMU.1592 -106 4.8 TTGAAAACACTTTCAA
Streptococcus pyogenes M1 GAS SPy0513 -117 4.3 TTGTAACCACTTTCAA
-84 4.6 TTGAAAAAGTTTTCAA
Streptococcus sanguinis SK36 SSA_1577 -97 4.6 TTGTAAACACTTTCAA
Streptococcus suis 05ZYH33 SSU05_1373 -135 4.5 TTGAAACCACTTTCAA
Streptococcus thermophilus CNRZ1066 str0629 -134 3.8 TATTCATCGCTTACAA
Streptococcus uberis 0140J SUB0535 -115 4.5 TTGAAACCACTTTCAA
Position: -74
Score: 4.8
Sequence: TTGAAAGTGTTTTCAA
Locus tag: STER_0679
STER_0679 -74 4.8 TTGAAAGTGTTTTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ccpA
Ortholog function: Carbon catabolism global transcriptional regulator CcpA, LacI family
Lactococcus lactis subsp. cremoris SK11 LACR_1812 -93 4.4 TTGAAAAGGTTTACAG
Lactococcus lactis subsp. lactis Il1403 L0143 -93 4.4 TTGAAAAGGTTTACAG
-57 4.1 TAAAAATGGTTTTCAT
Streptococcus agalactiae 2603V/R SAG0707 -74 4.3 TTGAAAGTGTTTCCAA
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_0545 -105 4.6 TTGAAAACTTTTTCAA
-72 4.3 TTGAAAGTGGTTACAA
Streptococcus equi subsp. zooepidemicus MGCS10565 Sez_1410 -105 4.6 TTGAAAACTTTTTCAA
-72 4.3 TTGAAAGTGGTTACAA
Streptococcus gallolyticus UCN34 GALLO_1582 -122 4.7 AATTAAACGCTTACAA
-71 4.3 TTGAAAGTGTTTCCAA
Streptococcus gordonii str. Challis substr. CH1 SGO_0773 -82 4.3 TTGAAAGTGTTTCCAA
-38 4.5 ATGAAAACGTTATTTT
Streptococcus mitis B6 smi_0284 -113 4.6 TTGAAAGTGTTTACAA
Streptococcus mutans UA159 SMU.1591 -72 4.8 TTGAAAGTGTTTTCAA
Streptococcus pneumoniae TIGR4 SP_1999 -150 4.6 TTGAAAGTGTTTACAA
Streptococcus pyogenes M1 GAS SPy0514 -105 4.6 TTGAAAACTTTTTCAA
-72 4.3 TTGAAAGTGGTTACAA
Streptococcus sanguinis SK36 SSA_1576 -81 4.6 TTGAAAGTGTTTACAA
Streptococcus thermophilus CNRZ1066 str0630 -41 4.8 TTGAAAGTGTTTTCAA
Streptococcus uberis 0140J SUB0536 -72 4.5 TTGAAAGTGGTTTCAA
Position: -59
Score: 4.1
Sequence: ATGAAAAGGAATTCAA
Locus tag: STER_0683
STER_0683 -59 4.1 ATGAAAAGGAATTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yuel
Ortholog function: Conserved hypothetical protein
Streptococcus agalactiae 2603V/R SAG0627 -117 4 GTGAAACCGCTTTATT
Streptococcus gordonii str. Challis substr. CH1 SGO_1427 -107 4.2 AAATAAGCGTTTTTTT
Streptococcus mitis B6 smi_1160 -55 4.7 AAGTAATCGCTTTCTT
Streptococcus pneumoniae TIGR4 SP_1127 -55 4.7 AAGTAATCGCTTTCTT
Streptococcus pyogenes M1 GAS SPy0729 -48 4 TAGAAATCGATATAAT
Streptococcus sanguinis SK36 SSA_0885 -99 4.5 AAGAAAACGATTCCAA
Streptococcus thermophilus CNRZ1066 str0634 -59 4.1 ATGAAAAGGAATTCAA
Position: -165
Score: 4.1
Sequence: TTGAATTCCTTTTCAT
Locus tag: STER_0684
STER_0684 -165 4.1 TTGAATTCCTTTTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: eno
Ortholog function: Enolase (EC 4.2.1.11)
Streptococcus agalactiae 2603V/R SAG0628 -96 4 AATAAAGCGGTTTCAC
Streptococcus gordonii str. Challis substr. CH1 SGO_1426 -63 4.2 AAAAAAACGCTTATTT
Streptococcus mitis B6 smi_1159 -124 4.7 AAGAAAGCGATTACTT
Streptococcus pneumoniae TIGR4 SP_1128 -124 4.7 AAGAAAGCGATTACTT
Streptococcus pyogenes M1 GAS SPy0731 -194 4 ATTATATCGATTTCTA
Streptococcus sanguinis SK36 SSA_0886 -125 4.5 TTGGAATCGTTTTCTT
Streptococcus suis 05ZYH33 SSU05_1503 -115 4 AGGAAGGCGTTTACAT
Streptococcus thermophilus CNRZ1066 str0635 -165 4.1 TTGAATTCCTTTTCAT
Position: -79
Score: 4.6
Sequence: ATTATAGCGTTTACAA
Locus tag: STER_0709
STER_0709 -79 4.6 ATTATAGCGTTTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cas5-2
Ortholog function: CRISPR/Cas system-associated protein Cas9
Streptococcus gordonii str. Challis substr. CH1 SGO_1381 -85 4 CAGAAACCCCTTACAT
Streptococcus thermophilus CNRZ1066 str0657 -80 4.6 ATTATAGCGTTTACAA
Position: -58
Score: 4
Sequence: CTATAAAGGTTTTCAA
Locus tag: STER_0769
STER_0769 -58 4 CTATAAAGGTTTTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yvaA
Ortholog function: Bacterial conserved protein of unknown function (DUF910) family
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_1516 -42 4.5 TAGAAAGCGATTCCAT
Streptococcus equi subsp. zooepidemicus MGCS10565 Sez_0586 -60 4.2 CAGAAAGCGATTGCAT
Streptococcus mutans UA159 SMU.541 -58 3.9 AGGCAAGCGCTTGCAA
Streptococcus pyogenes M1 GAS SPy1530 -60 4.5 TAGAAAGCGATTCCAT
Streptococcus thermophilus CNRZ1066 str0727 -58 4 CTATAAAGGTTTTCAA
Position: -89
Score: 4.3
Sequence: TGAAAAACGTTTACAA
Locus tag: STER_0771
STER_0771 -89 4.3 TGAAAAACGTTTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: typA
Ortholog function: GTP-binding protein TypA/BipA
Lactococcus lactis subsp. cremoris SK11 LACR_2298 -167 3.8 TATTTAGCGATTTTAT
-71 4 TTGTAAACGTGTGCAT
Streptococcus agalactiae 2603V/R SAG0473 -96 4 ATGAAAACATTTACAC
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_1513 -90 4.3 CTGAAAACATTTACAA
Streptococcus equi subsp. zooepidemicus MGCS10565 Sez_0589 -75 4.6 TTGAAAACATTTACAA
Streptococcus gordonii str. Challis substr. CH1 SGO_0669 -97 4 ATGAAAACATTTACAC
Streptococcus mutans UA159 SMU.546 -95 4.3 TTTAAAACATTTACAT
Streptococcus sanguinis SK36 SSA_0650 33 4 ATGAAAACATTTACAC
Streptococcus suis 05ZYH33 SSU05_0468 -89 4.3 CTGAAAACATTTACAA
Streptococcus thermophilus CNRZ1066 str0729 -89 4.3 TGAAAAACGTTTACAA
Streptococcus uberis 0140J SUB1296 -94 4.3 CTGAAAACATTTACAA
Position: -33
Score: 4.8
Sequence: ATGTAAGCGTTTAAAA
Locus tag: STER_0833
STER_0833 -33 4.8 ATGTAAGCGTTTAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: pgm
Ortholog function: Phosphoglucomutase (EC 5.4.2.2)
Streptococcus agalactiae 2603V/R SAG1066 -35 4.9 ATGAAAGCGTTTATAA
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_1043 -34 4.7 ATGAAAGCGGTTAAAA
Streptococcus equi subsp. zooepidemicus MGCS10565 Sez_0941 0 4.7 ATGAAAGCGGTTAAAA
Streptococcus gallolyticus UCN34 GALLO_1123 -39 4.6 ATGAAAGCGTTTAGAA
Streptococcus gordonii str. Challis substr. CH1 SGO_1215 -83 4.4 ATGAAAGCGATTAGAT
Streptococcus mitis B6 smi_1173 -40 4.5 ATGTAAACGATTAAAA
Streptococcus mutans UA159 SMU.1077 -55 4.7 ATGAAAGCGGTTAAAT
Streptococcus pyogenes M1 GAS SPy1224 -35 4.9 ATGAAAGCGTTTATAA
Streptococcus sanguinis SK36 SSA_1204 -137 4 ATTTCATCGTTTTCTA
Streptococcus suis 05ZYH33 SSU05_0686 -40 4.8 ATGAAAGCGTTTAATA
Streptococcus thermophilus CNRZ1066 str0787 -33 4.8 ATGTAAGCGTTTAAAA
Streptococcus uberis 0140J SUB0946 -34 4.5 ATGAAAGCGGTTAATA
Position: -99
Score: 4.2
Sequence: TTGTAAAGGTTTATAT
Position: -45
Score: 4.3
Sequence: TTGATAAGGCTTACAT
Locus tag: STER_0851
STER_0851 -99 4.2 TTGTAAAGGTTTATAT
-45 4.3 TTGATAAGGCTTACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: coaA
Ortholog function: Pantothenate kinase (EC 2.7.1.33)
Lactococcus lactis subsp. cremoris SK11 LACR_1533 -68 4.1 TTTAATACGCTTACAG
Lactococcus lactis subsp. lactis Il1403 L66222 -68 4.1 TTTAATACGCTTACAG
Streptococcus agalactiae 2603V/R SAG0951 -60 4.5 TTGAAACGGTTTTCAA
-29 3.9 TTATAATAGCTTTCAT
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_1052 -199 3.9 TTTTAAAGGTTTCCAA
-32 4.2 ATGTAAGCACTGTCAA
Streptococcus equi subsp. zooepidemicus MGCS10565 Sez_0931 -223 4.4 TTGAAATGGTTTACAA
Streptococcus gallolyticus UCN34 GALLO_1139 -69 4.4 TTGTAACGGTTTTCAA
-47 3.8 ATTAAAGTGCTATAAT
Streptococcus gordonii str. Challis substr. CH1 SGO_1077 -74 4.1 TGTAAATCGTTTACAT
Streptococcus mitis B6 smi_0883 -64 4.5 AAGAAACCGCTTTATT
Streptococcus mutans UA159 SMU.1126 -52 4.5 TTGAAACGGTTTTCAA
Streptococcus pneumoniae TIGR4 SP_0839 -64 4.5 AAGAAACCGCTTTATT
Streptococcus pyogenes M1 GAS SPy1233 -223 4.4 TTGAAATGGTTTACAA
-32 4.2 ATGTAAGCACTGTCAA
Streptococcus sanguinis SK36 SSA_1033 -64 4.3 TGTAAATCGTTTTCAT
Streptococcus suis 05ZYH33 SSU05_1088 -89 4.7 CTAAAAACGTTTTCAA
-32 4 ATTGAAACGCTTACCT
Streptococcus thermophilus CNRZ1066 str0799 -45 4.3 TTGATAAGGCTTACAT
Streptococcus uberis 0140J SUB0955 -219 4.4 TTGAAATGGTTTACAA
Position: -96
Score: 4.2
Sequence: ATGTAAGGCTTTTCAT
Locus tag: STER_1036
STER_1036 -96 4.2 ATGTAAGGCTTTTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: acoA
Ortholog function: Acetoin dehydrogenase E1 component alpha-subunit (EC 1.2.4.-)
Streptococcus agalactiae 2603V/R SAG0878 -81 4.2 AAGAAAGCGGTTCAAA
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_1250 -67 4.7 AAGAAAGCGATTTAAT
Streptococcus equi subsp. zooepidemicus MGCS10565 Sez_1222 -90 3.9 TTAAAAAAGCTTTTAT
-67 4.5 AAGAAAGCGATTAAAA
Streptococcus gallolyticus UCN34 GALLO_0867 -99 5 TTTAAAACGTTTTCAA
Streptococcus gordonii str. Challis substr. CH1 SGO_1133 -63 4.4 TTGACAGGGTTTTCAT
Streptococcus mutans UA159 SMU.127 -51 4.1 TAGAAAGCGGTTCAAA
Streptococcus pyogenes M1 GAS SPy1026 -79 4.7 TAGAAAGCGATTTAAT
Streptococcus sanguinis SK36 SSA_1178 -63 3.8 TTGACAGTGCTTACAG
Streptococcus suis 05ZYH33 SSU05_1841 -36 4.2 AAGAAAACGGTTCAAT
Streptococcus thermophilus CNRZ1066 str1051 -96 4.2 ATGTAAGGCTTTTCAT
Streptococcus uberis 0140J SUB1103 -80 4.6 TAGAAAGCGGTTTTAA
Position: -94
Score: 4.5
Sequence: TTGATAGCCTTTTCAT
Locus tag: STER_1078
STER_1078 -94 4.5 TTGATAGCCTTTTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: rpiA
Ortholog function: Ribose 5-phosphate isomerase A (EC 5.3.1.6)
Streptococcus agalactiae 2603V/R SAG1183 -110 4.6 AAGAAAATGTTTTCAA
Streptococcus equi subsp. zooepidemicus MGCS10565 Sez_1165 -61 4.3 AAGTTTGCGCTTTCAT
Streptococcus gordonii str. Challis substr. CH1 SGO_1265 -120 4.3 AGGAAAATGCTTTCAT
Streptococcus pneumoniae TIGR4 SP_0828 -53 4.4 ATAAAAGCCTTTACAT
Streptococcus pyogenes M1 GAS SPy0889 -171 4 AAGTAAGTGCTTATAT
Streptococcus sanguinis SK36 SSA_1261 -66 4.7 AAGAAAACACTTTCAT
Streptococcus thermophilus CNRZ1066 str1121 -94 4.5 TTGATAGCCTTTTCAT
Position: -186
Score: 4.5
Sequence: TAGTAAGGGTTTTCAA
Locus tag: STER_1084
STER_1084 -186 4.5 TAGTAAGGGTTTTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: xylH
Ortholog function: 4-oxalocrotonate tautomerase (EC 5.3.2.-); Xylose transport system permease protein xylH
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_0898 -86 4.1 TGGTAAGCCTTTTCAA
Streptococcus gallolyticus UCN34 GALLO_1032 10 3.9 TAAAAATCGATTTATT
Streptococcus thermophilus CNRZ1066 str1128 -186 4.5 TAGTAAGGGTTTTCAA
Streptococcus uberis 0140J SUB0869 -75 4.4 ATAATAGCGGTTTCAA
Position: -69
Score: 3.8
Sequence: TTTAAAGCCATTTATA
Position: -38
Score: 3.7
Sequence: ATGAAAATGTTAAATA
Locus tag: STER_1164
STER_1164 -69 3.8 TTTAAAGCCATTTATA
-38 3.7 ATGAAAATGTTAAATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: pfk
Ortholog function: 6-phosphofructokinase (EC 2.7.1.11)
Lactococcus lactis subsp. cremoris SK11 LACR_1457 -184 4.2 TAGAAAACCCTTGCAA
-143 4.4 ATGAAAACGTTTCATA
Lactococcus lactis subsp. lactis Il1403 L0002 -184 4.2 TAGAAAACCCTTGCAA
-143 4.4 ATGAAAACGTTTCATA
Streptococcus agalactiae 2603V/R SAG0940 -37 3.8 ATTAAATCGTTAAATT
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_1095 -100 3.9 TTGAAAACGGTTTTTC
-36 4 ATAAAAACGTTAAATT
Streptococcus equi subsp. zooepidemicus MGCS10565 Sez_0881 -100 3.9 TTGAAAACGGTTTTTC
-36 4 ATAAAAACGTTAAATT
Streptococcus gallolyticus UCN34 GALLO_0989 -135 4.3 ATTGAAGCGCTATCAA
-111 4 TTGAAAACGATTTATC
Streptococcus gordonii str. Challis substr. CH1 SGO_1340 -92 4.1 ATGAAAACGATTTATC
Streptococcus mitis B6 smi_1004 -102 4.1 ATGAAAACGATTTATC
Streptococcus mutans UA159 SMU.1191 -103 3.9 CTGAAAACGCTTTTTC
Streptococcus pneumoniae TIGR4 SP_0896 -102 4.1 ATGAAAACGATTTATC
Streptococcus sanguinis SK36 SSA_0847 -105 4 ATGAAAACGATTTTTC
Streptococcus suis 05ZYH33 SSU05_0543 -147 3.9 ATGAAAACGCCTCAAT
-105 4 ATGAAAACGATTTTTC
Streptococcus thermophilus CNRZ1066 str1197 -67 4.1 TTGAAAACGGTTTTAC
Streptococcus uberis 0140J SUB1001 -36 4.1 ATTAAAACGTTAAATT
Position: -56
Score: 4.3
Sequence: TTGTAAGGGTTATCAT
Locus tag: STER_1243
STER_1243 -56 4.3 TTGTAAGGGTTATCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ptsH
Ortholog function: Phosphotransferase system, HPr-related protein
Streptococcus agalactiae 2603V/R SAG0821 -60 3.8 TTGTAAGGGTTACCAA
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_1421 -167 4 AAGAAAACGAATAAAA
-58 4.3 TTGTAAGGGTTATCAT
Streptococcus equi subsp. zooepidemicus MGCS10565 Sez_0764 -136 4.2 AAGAAAACTGTTTCAT
-58 4.3 TTGTAAGGGTTATCAT
Streptococcus gallolyticus UCN34 GALLO_0744 -200 4.4 ATGAAAACGCTCAAAA
-122 3.8 AAGAAAGCGCGCACAA
-58 4.3 TTGTAAGGGTTATCAT
Streptococcus gordonii str. Challis substr. CH1 SGO_1556 -90 4.4 TTGAAAAAGATTTCAA
-55 4.3 TTGTAAGGGTTATCAA
Streptococcus mitis B6 smi_1045 -196 4.2 TATAAATCGTTTTTAA
Streptococcus mutans UA159 SMU.674 -60 4.3 TTGTAAGGGTTATCAT
Streptococcus pyogenes M1 GAS SPy1373 -58 4.3 TTGTAAGGGTTATCAT
Streptococcus sanguinis SK36 SSA_0772 -90 4.4 TTGAAAAAGATTTCAA
Streptococcus suis 05ZYH33 SSU05_1201 -91 4.5 TTGAAAATGATTTCAA
Streptococcus thermophilus CNRZ1066 str1265 -56 4.3 TTGTAAGGGTTATCAT
Streptococcus uberis 0140J SUB1223 -137 3.8 AAGAAAACATTTCAAA
-60 3.9 TTGTAAGGGTTACCAT
Position: -138
Score: 4
Sequence: TAAAAAGCGTTATATT
Position: -115
Score: 4.5
Sequence: TTTAAAACGCTTTCAC
Locus tag: STER_1257
STER_1257 -138 4 TAAAAAGCGTTATATT
-115 4.5 TTTAAAACGCTTTCAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ldh
Ortholog function: L-lactate dehydrogenase (EC 1.1.1.27)
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_0911 -123 3.9 CTGGAAGCGTTATCAG
Streptococcus gordonii str. Challis substr. CH1 SGO_1232 -116 4.6 CTAAAAACGTTTACAT
Streptococcus pneumoniae TIGR4 SP_1220 -117 4.3 ACTAAAACGTTTACAT
Streptococcus pyogenes M1 GAS SPy1151 -123 4.2 TTGGAAGCGTTATCAG
Streptococcus sanguinis SK36 SSA_1221 -114 4.3 GTAAAAACGTTTACAT
Streptococcus suis 05ZYH33 SSU05_1076 -113 4.6 ATGTAAACATTTTCAA
Streptococcus thermophilus CNRZ1066 str1280 -115 4.5 TTTAAAACGCTTTCAC
Position: -69
Score: 4.2
Sequence: GTGTAACCGTTTTCTA
Locus tag: STER_1258
STER_1258 -69 4.2 GTGTAACCGTTTTCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: naoX
Ortholog function: Predicted NADH oxidase
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_0909 -68 4.1 TTGGAAGCGTTTTTTG
Streptococcus gallolyticus UCN34 GALLO_1130 -66 4.8 TTGTAAGCGTTTTATA
Streptococcus gordonii str. Challis substr. CH1 SGO_1167 -67 4.3 TTGAAACCGCTAACAG
Streptococcus mitis B6 smi_1390 -67 4.4 TTGTAAACGCTAACAG
Streptococcus pyogenes M1 GAS SPy1150 -68 4.1 TTGGAAGCGTTTTTTG
Streptococcus sanguinis SK36 SSA_1127 -66 4.2 TTGTAAACGCTCACAG
Streptococcus suis 05ZYH33 SSU05_0730 -59 4.3 TTGAAATCGGTAACAT
Streptococcus thermophilus CNRZ1066 str1281 -57 4.2 GTGTAACCGTTTTCTA
Streptococcus uberis 0140J SUB0877 -72 4.5 TTGGAAGCGTTTTATT
Position: 20
Score: 3.9
Sequence: TTATAAACCCTTTATT
Locus tag: STER_1286
STER_1286 20 3.9 TTATAAACCCTTTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: drrB
Ortholog function: Daunorubicin resistance transmembrane protein drrB
Streptococcus gordonii str. Challis substr. CH1 SGO_1743 -154 3.9 AGGCAAACGCTTGCAT
Streptococcus pneumoniae TIGR4 SP_0637 -154 3.9 AGGCAAACGCTTGCAT
Position: -35
Score: 4.8
Sequence: ATGTAAACGTATTCAA
Locus tag: STER_1367
STER_1367 -35 4.8 ATGTAAACGTATTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: lacS
Ortholog function: Lactose and galactose permease, GPH translocator family
Streptococcus thermophilus CNRZ1066 str1398 -35 4.8 ATGTAAACGTATTCAA
Position: -93
Score: 4.4
Sequence: ATGTAAGCGGTTACTG
Locus tag: STER_1622
STER_1622 -93 4.4 ATGTAAGCGGTTACTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: pfl
Ortholog function: Pyruvate formate-lyase (EC 2.3.1.54)
Lactococcus lactis subsp. cremoris SK11 LACR_0691 -156 5.1 ATGAAAACGTTTTAAA
Lactococcus lactis subsp. lactis Il1403 L57408 -156 5.1 ATGAAAACGTTTTAAA
Streptococcus gallolyticus UCN34 GALLO_1953 -82 4.2 TGGAAAACGCTTCCTT
Streptococcus gordonii str. Challis substr. CH1 SGO_0247 -115 4.6 AAGAAAAGGCTTACAA
-83 4.1 GTGTAAACGATTACTA
Streptococcus mitis B6 smi_1815 -82 4.2 TTGAAATCGGTTACTG
Streptococcus mutans UA159 SMU.402 -113 4.9 AAGAAATCGCTTACAA
Streptococcus pneumoniae TIGR4 SP_0459 -78 4.5 TTGAAATCGGTTACTA
Streptococcus suis 05ZYH33 SSU05_0200 -124 4.1 TTGAAAGGTTTTTCAT
-84 4.6 TAGAAAGTGTTTTCAA
Streptococcus thermophilus CNRZ1066 str1657 -93 4.4 ATGTAAGCGGTTACTG
Position: -107
Score: 4.1
Sequence: AGTGAAGCGTTTTCAA
Locus tag: STER_1710
STER_1710 -107 4.1 AGTGAAGCGTTTTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: scrA
Ortholog function: Sucrose-specific PTS system, IIABC component (EC 2.7.1.69)
Streptococcus agalactiae 2603V/R SAG1690 -146 4.3 TAGTAAACGTTTTCTC
-37 4.5 AATGAAACGCTTTCAA
Streptococcus gordonii str. Challis substr. CH1 SGO_1857 -162 4.6 TAGTAAACGTTTTCTG
-52 4.8 ATAAAATCGCTTTCAA
Streptococcus mitis B6 smi_1615 -52 4.8 ATAAAATCGCTTTCAA
Streptococcus pneumoniae TIGR4 SP_1722 -52 4.8 ATAAAATCGCTTTCAA
Streptococcus sanguinis SK36 SSA_0456 -157 4.6 TAGTAAACGTTTTCTG
-49 4.8 ATAAAATCGCTTTCAA
Streptococcus suis 05ZYH33 SSU05_1817 -171 4.9 TAGTAAACGTTTTCTT
-52 4.8 TTGAAAACACTTTCAA
Streptococcus thermophilus CNRZ1066 str1734 -100 4 AGTGAAACGTTTTCAA
Position: -158
Score: 4.1
Sequence: TTGAAAACGCTTCACT
Locus tag: STER_1711
STER_1711 -158 4.1 TTGAAAACGCTTCACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: scrB
Ortholog function: Sucrose-6-phosphate hydrolase (EC 3.2.1.26)
Streptococcus agalactiae 2603V/R SAG1691 -163 4.5 TTGAAAGCGTTTCATT
-54 4.3 GAGAAAACGTTTACTA
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_1872 -53 4.2 AAGAAAACGTTTAGTA
Streptococcus gallolyticus UCN34 GALLO_1893 -52 4.9 AAGAAAACGTTTACTA
Streptococcus gordonii str. Challis substr. CH1 SGO_1858 -163 4.8 TTGAAAGCGATTTTAT
-53 4.6 CAGAAAACGTTTACTA
Streptococcus mitis B6 smi_1616 -176 4 TTAAAAGGGTTTTATT
Streptococcus mutans UA159 SMU.1843 -164 4.9 TTGAAAGCGTTTTTTT
-57 4.9 AAGAAAACGTTTACTA
Streptococcus sanguinis SK36 SSA_0455 -161 4.8 TTGAAAGCGATTTTAT
-53 4.6 CAGAAAACGTTTACTA
Streptococcus suis 05ZYH33 SSU05_1818 -52 4.8 TTGAAAGTGTTTTCAA
Streptococcus thermophilus CNRZ1066 str1735 -158 4 TTGAAAACGTTTCACT
Position: -27
Score: 4.9
Sequence: TTGAAAGCGTTTTATA
Locus tag: STER_1834
STER_1834 -27 4.9 TTGAAAGCGTTTTATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ackA
Ortholog function: Acetate kinase (EC 2.7.2.1)
Lactococcus lactis subsp. cremoris SK11 LACR_2294 -30 4.3 AATAAAACGCATACAT
Lactococcus lactis subsp. cremoris SK11 LACR_2295 -129 4.4 ATGCAAACGCTTTTTA
Lactococcus lactis subsp. lactis Il1403 L0224 -30 4.3 AATAAAACGCATACAT
Lactococcus lactis subsp. lactis Il1403 L73818 -129 4.5 TTGAAAAGGTTTTTAT
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_0142 -28 4.9 TAGAAAACGATTTCAA
Streptococcus equi subsp. zooepidemicus MGCS10565 Sez_0124 -28 4.6 CAGAAAACGATTTCAA
Streptococcus gallolyticus UCN34 GALLO_0095 -25 4.4 ATGAAAGCGCTTTAGA
Streptococcus gordonii str. Challis substr. CH1 SGO_1916 -26 4.6 CTGAAAACGCTTAAAA
Streptococcus mitis B6 smi_0214 -90 5 ATGAAAACGCTTAAAA
Streptococcus mutans UA159 SMU.1978 -28 4.3 TCGTAAACGATTTCAT
Streptococcus pneumoniae TIGR4 SP_2044 -30 4.9 TTGAAAACGCTTAAAA
Streptococcus pyogenes M1 GAS SPy0109 -28 4.6 CAGAAAACGATTTCAA
Streptococcus sanguinis SK36 SSA_0192 -26 4.6 TTGAAAACGCTTAAAG
3 4.3 TCGAAAACGATTTCTA
Streptococcus suis 05ZYH33 SSU05_0135 -27 4.5 AGGAAAACGCTTTAAA
Streptococcus thermophilus CNRZ1066 str1857 0 4.9 TTGAAAGCGTTTTATA
Streptococcus uberis 0140J SUB0126 -28 4.6 CAGAAAACGATTTCAA
Position: -106
Score: 4.6
Sequence: ATCAAAACGCTTACAA
Position: -44
Score: 4.2
Sequence: ATGTAAACGGGTTCAA
Locus tag: STER_1876
STER_1876 -106 4.6 ATCAAAACGCTTACAA
-44 4.2 ATGTAAACGGGTTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fbaA
Ortholog function: Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
Streptococcus gordonii str. Challis substr. CH1 SGO_1745 -107 4.1 GAGAAAGCGTTTTATA
Streptococcus pneumoniae TIGR4 SP_0605 -137 4 GAGAAAGGGTTTACAT