Propagation of CcpA regulog to Geobacillus kaustophilus HTA426
| Source regulog: | CcpA - Bacillales |
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | |
| Biological process: | Carbon catabolism |
| Effector: | HPr, phosphocarrier protein |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Geobacillus kaustophilus HTA426 |
| Orthologous TF(s) | GK2810 |
| Regulated genes | 20 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -37
Score: 4.8 Sequence: TTGAAAACGCTTGAAT
Locus tag: GK0929
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| GK0929 | -37 | 4.8 | TTGAAAACGCTTGAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ywcB | ||||
| Ortholog function: Hypothetical membrane spanning protein | ||||
| Geobacillus kaustophilus HTA426 | GK0929 | -37 | 4.8 | TTGAAAACGCTTGAAT |
|
Position: -47
Score: 4.2 Sequence: ATGAAAGCGCTAAGAC
Locus tag: GK1208
|
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| GK1208 | -47 | 4.2 | ATGAAAGCGCTAAGAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sucC | ||||
| Ortholog function: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_015920 | -52 | 4.8 | ATGAAAGCGCAGTCTA |
| Bacillus licheniformis DSM 13 | BLi01829 | -53 | 4.8 | ATGAAAGCGCAGTCTA |
| Bacillus pumilus SAFR-032 | BPUM_1507 | -57 | 4.8 | ATGAAAGCGCAGTCTA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU16090 | -51 | 4.8 | ATGAAAGCGCAGTCTA |
| Geobacillus kaustophilus HTA426 | GK1208 | -47 | 4.2 | ATGAAAGCGCTAAGAC |
|
Position: -206
Score: 5.1 Sequence: TTGACAGCGTTTTCAA
Locus tag: GK1359
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| GK1359 | -206 | 5.1 | TTGACAGCGTTTTCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glpF | ||||
| Ortholog function: Glycerol uptake facilitator protein | ||||
| Bacillus cereus ATCC 14579 | BC1034 | -191 | 4.7 | TTGACACCGCTTTCAT |
| Bacillus clausii KSM-K16 | ABC3383 | -198 | 4.2 | ATGTATCCGTTTACAA |
| Bacillus licheniformis DSM 13 | BLi00994 | -207 | 4.5 | TTGACAACGCTTTCAC |
| Bacillus pumilus SAFR-032 | BPUM_0882 | -191 | 4.9 | TTGACAACGTTTTCAT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU09280 | -182 | 4.7 | TTGACACCGCTTTCAT |
| Geobacillus kaustophilus HTA426 | GK1359 | -206 | 5.1 | TTGACAGCGTTTTCAA |
| Oceanobacillus iheyensis HTE831 | OB2476 | -164 | 4.7 | TTGACAACGCTTTCAG |
|
Position: -103
Score: 4.9 Sequence: TTGAAAACGCTTCAAA
Locus tag: GK1597
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| GK1597 | -103 | 4.9 | TTGAAAACGCTTCAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yngJ | ||||
| Ortholog function: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10) | ||||
| Bacillus clausii KSM-K16 | ABC1506 | -77 | 4.6 | TTGGTAACGCTTTCAT |
| Bacillus halodurans C-125 | BH1130 | -105 | 4.7 | TTGGTAGCGCTTACAT |
| Geobacillus kaustophilus HTA426 | GK1597 | -103 | 4.9 | TTGAAAACGCTTCAAA |
|
Position: -9
Score: 4.4 Sequence: ATGAAAACGATGCCAA
Locus tag: GK1855
|
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| GK1855 | -9 | 4.4 | ATGAAAACGATGCCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gmuR | ||||
| Ortholog function: Transcriptional regulator of glucomannan utilization, GntR family | ||||
| Bacillus halodurans C-125 | BH3917 | -36 | 4.2 | GTGAAAGCGCTTATCA |
| Bacillus licheniformis DSM 13 | BLi02559 | -34 | 4.8 | GTGAAAGCGCTTTTAA |
| Bacillus pumilus SAFR-032 | BPUM_2117 | -37 | 4.2 | CTGGAAGCGCTTTTAT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU05850 | -33 | 5 | ATGTAAGCGTTTTAAT |
| Geobacillus kaustophilus HTA426 | GK1855 | -50 | 4.8 | TTGAAAACGATATCAT |
|
Position: -50
Score: 4.8 Sequence: TTGAAAACGATATCAT
Locus tag: GK1859
|
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| GK1859 | -50 | 4.8 | TTGAAAACGATATCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gmuB | ||||
| Ortholog function: PTS system, cellobiose-specific IIB component (EC 2.7.1.69) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_035870 | -38 | 4.7 | ATGAAAACGTTTTAAC |
| Bacillus clausii KSM-K16 | ABC0481 | -60 | 4.9 | TTGTAAGCGGATTCAT |
| Bacillus halodurans C-125 | BH3921 | -36 | 4.2 | GTGAAAGCGCTTATCA |
| Bacillus licheniformis DSM 13 | BLi02564 | -34 | 4.8 | GTGAAAGCGCTTTTAA |
| Bacillus pumilus SAFR-032 | BPUM_2121 | -37 | 4.2 | CTGGAAGCGCTTTTAT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU05810 | -33 | 5 | ATGTAAGCGTTTTAAT |
| Geobacillus kaustophilus HTA426 | GK1859 | -50 | 4.8 | TTGAAAACGATATCAT |
| Oceanobacillus iheyensis HTE831 | OB2760 | -62 | 4.8 | TTGTAACCGTTTTCTT |
|
Position: -59
Score: 5 Sequence: ATGAAAGCGTTATAAT
Locus tag: GK1875
|
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| GK1875 | -59 | 5 | ATGAAAGCGTTATAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: xylA | ||||
| Ortholog function: Xylose isomerase (EC 5.3.1.5) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_017350 | 34 | 5.1 | TTGAAAGCGCAAACAA |
| Bacillus clausii KSM-K16 | ABC0572 | -72 | 4.7 | TTGACACCGCTTACAA |
| Bacillus halodurans C-125 | BH2757 | -33 | 4.7 | TTGATAACGCTTACTT |
| Bacillus licheniformis DSM 13 | BLi04048 | -109 | 4.5 | TTGAAAGCGATTAATT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU17600 | 34 | 4.7 | TTGGAAGCGCAAACAA |
| Geobacillus kaustophilus HTA426 | GK1875 | -59 | 5 | ATGAAAGCGTTATAAT |
|
Position: -129
Score: 4.4 Sequence: TTGAAAACGCTTCAAC
Locus tag: GK1910
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| GK1910 | -129 | 4.4 | TTGAAAACGCTTCAAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: araF | ||||
| Ortholog function: L-arabinose-binding periplasmic protein precursor AraF (TC 3.A.1.2.2) | ||||
| Bacillus clausii KSM-K16 | ABC0409 | -35 | 5.4 | TTGAAAGCGTTATCAA |
| Bacillus halodurans C-125 | BH3442 | -64 | 5 | ATGACAACGCTTTCAT |
| Bacillus licheniformis DSM 13 | BLi00442 | -128 | 4.8 | ATGTAAGCGCTTCAAA |
| Geobacillus kaustophilus HTA426 | GK1910 | -129 | 4.4 | TTGAAAACGCTTCAAC |
|
Position: -50
Score: 4.5 Sequence: ATGAAAACGCTTTTGA
Locus tag: GK1942
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| GK1942 | -50 | 4.5 | ATGAAAACGCTTTTGA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: endR | ||||
| Ortholog function: Probable HTH-type transcriptional regulator endR, LacI family | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_018000 | 0 | 4.3 | ATGAAAGCGGTTCTAG |
| Geobacillus kaustophilus HTA426 | GK1942 | -50 | 4.5 | ATGAAAACGCTTTTGA |
|
Position: -54
Score: 4.8 Sequence: TTGTAAGCGTTTTAAG
Locus tag: GK1948
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| GK1948 | -54 | 4.8 | TTGTAAGCGTTTTAAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: mtlA | ||||
| Ortholog function: PTS family mannitol-permease II, BC component | ||||
| Anoxybacillus flavithermus WK1 | Aflv_1566 | -58 | 4.5 | CTGTAAGCGCTTTAAT |
| Bacillus amyloliquefaciens FZB42 | RBAM_004230 | -96 | 4.6 | TTGTAAGCGTTTTATG |
| Bacillus halodurans C-125 | BH3854 | -39 | 4.3 | ATGAGAGCGCTTTATT |
| Bacillus licheniformis DSM 13 | BLi00505 | -94 | 4.4 | CTGTAAGCGTTTTAAT |
| Bacillus pumilus SAFR-032 | BPUM_0369 | -106 | 4.1 | GTGAAAGCGTTTTACG |
| Bacillus subtilis subsp. subtilis str. 168 | BSU03981 | -95 | 4 | CTGTAAGCGTTTTAAC |
| Geobacillus kaustophilus HTA426 | GK1948 | -54 | 4.8 | TTGTAAGCGTTTTAAG |
| Oceanobacillus iheyensis HTE831 | OB2603 | -75 | 4.4 | TTGTAAGCGGATTCCT |
| Paenibacillus sp. JDR-2 | Pjdr2_6226 | -33 | 4.1 | AAGAAAGCGATTTTAT |
|
Position: -43
Score: 4.6 Sequence: AAGAAAGCGGTTTCTT
Locus tag: GK2371
|
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| GK2371 | -43 | 4.6 | AAGAAAGCGGTTTCTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: mutA | ||||
| Ortholog function: Methylmalonyl-CoA mutase (EC 5.4.99.2) | ||||
| Anoxybacillus flavithermus WK1 | Aflv_0966 | -39 | 4.3 | AAGAAAGCGTTTTAAC |
| Geobacillus kaustophilus HTA426 | GK2371 | -43 | 4.6 | AAGAAAGCGGTTTCTT |
| Geobacillus kaustophilus HTA426 | GK2370 | -43 | 4.6 | AAGAAAGCGGTTTCTT |
|
Position: -165
Score: 5.1 Sequence: ATGTAAGCGCATTCAA
Locus tag: GK2662
|
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| GK2662 | -165 | 5.1 | ATGTAAGCGCATTCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: dat | ||||
| Ortholog function: Branched-chain amino acid aminotransferase (EC 2.6.1.42) | ||||
| Anoxybacillus flavithermus WK1 | Aflv_0590 | -170 | 4.8 | ATGTAAGCGGATACAT |
| Bacillus cereus ATCC 14579 | BC1396 | -153 | 5 | TTGTAAACGTTAACAA |
| Bacillus licheniformis DSM 13 | BLi02962 | -225 | 5 | ATGTAAGCGTATACAA |
| Bacillus pumilus SAFR-032 | BPUM_2473 | -200 | 4.6 | GTGTAAGCGTATACAT |
| Geobacillus kaustophilus HTA426 | GK2662 | -165 | 5.1 | ATGTAAGCGCATTCAA |
|
Position: -41
Score: 4.6 Sequence: TTGAAAGGGGTTTCAA
Locus tag: GK3207
|
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| GK3207 | -41 | 4.6 | TTGAAAGGGGTTTCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: BH3845 | ||||
| Ortholog function: Predicted beta-glucoside-regulated ABC transport system, sugar-binding protein | ||||
| Bacillus halodurans C-125 | BH3845 | -81 | 4.9 | ATGAAAGCGATTTCTT |
| 24 | 4.6 | ATGATAGCGCTTTCTG | ||
| Bacillus pumilus SAFR-032 | BPUM_3238 | -37 | 4.9 | TTGATAACGCTTACAA |
| Geobacillus kaustophilus HTA426 | GK3207 | -41 | 4.6 | TTGAAAGGGGTTTCAA |
|
Position: -40
Score: 4.6 Sequence: TTGTAATCGCTTTCTT
Locus tag: GK3397
|
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| GK3397 | -40 | 4.6 | TTGTAATCGCTTTCTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: mmgA | ||||
| Ortholog function: 3-ketoacyl-CoA thiolase [isoleucine degradation] (EC 2.3.1.16) | ||||
| Anoxybacillus flavithermus WK1 | Aflv_2739 | -16 | 4.7 | TTGAAAGGGCTTTCTT |
| Bacillus amyloliquefaciens FZB42 | RBAM_022450 | -43 | 4.6 | GTGTAAGCGTTATCTT |
| Bacillus halodurans C-125 | BH3801 | -65 | 5 | ATGTAAGCGCTTAAAT |
| Bacillus pumilus SAFR-032 | BPUM_3373 | -32 | 4.9 | ATGTAAGCGGTAACAA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU24170 | -37 | 4.9 | TTGTAAGCGCTGTCTA |
| Geobacillus kaustophilus HTA426 | GK3397 | -40 | 4.6 | TTGTAATCGCTTTCTT |