Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of CodY regulog to Streptococcus suis BM407

Reference regulog properties
Source regulog: CodY - Streptococcaceae
Regulator type: Transcription factor
Regulator family: CodY
Regulation mode: repressor (activator)
Biological process: Amino acid metabolism
Effector: Guanosine triphosphate; Branched-chain amino acids
Phylum: Firmicutes
Propagated regulon:
Target genome Streptococcus suis BM407
Orthologous TF(s) SSUBM407_0309
Regulated genes 18
Built upon 273 sites [see more]
Predicted regulatory interactions in Streptococcus suis BM407
Locus tag Position Score Sequence
Position: -62
Score: 4.9
Sequence: AATTATCAGATAAAT
Position: -45
Score: 5.1
Sequence: AATTGTCAGACAATT
Locus tag: SSUBM407_0225
SSUBM407_0225 -62 4.9 AATTATCAGATAAAT
-45 5.1 AATTGTCAGACAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gdhA
Ortholog function: NADP-specific glutamate dehydrogenase (EC 1.4.1.4)
Streptococcus agalactiae 2603V/R SAG1335 -55 4.9 AAAATTCTGACAATT
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_0823 -61 5.3 AAAATTCAGAAAATT
Streptococcus equi subsp. zooepidemicus MGCS10565 Sez_1090 -65 5.3 AAAATTCAGAAAATT
Streptococcus gallolyticus UCN34 GALLO_1293 -78 5.8 AATTTTCAGAAAATT
Streptococcus gordonii str. Challis substr. CH1 SGO_0276 -95 5.8 AATTTTCAGAAAATT
Streptococcus mitis B6 smi_0814 -95 5.5 AATTTTTAGAAAATT
Streptococcus mutans UA159 SMU.913 -68 5.6 AATATTCAGAAAATT
Streptococcus pneumoniae TIGR4 SP_1306 -94 5.5 AATTTTTAGAAAATT
Streptococcus sanguinis SK36 SSA_0371 -182 5.5 AATTTTTAGAAAATT
Streptococcus suis 05ZYH33 SSU05_0252 -45 5.1 AATTGTCAGACAATT
Streptococcus thermophilus CNRZ1066 str0430 -52 5 AAGATTCTGAAAATT
Streptococcus uberis 0140J SUB0762 -60 5.6 AATATTCTGAAAATT
Position: -173
Score: 5.1
Sequence: ATTTTTTTGAAAATT
Locus tag: SSUBM407_0251
SSUBM407_0251 -173 5.1 ATTTTTTTGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: adhB1
Ortholog function: Alcohol dehydrogenase (EC 1.1.1.1)
Streptococcus agalactiae 2603V/R SAG0054 -100 5.2 AATTTTCTGAAAATC
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_0062 -113 5.2 AATTTTCAGAAAACT
Streptococcus gordonii str. Challis substr. CH1 SGO_0565 -282 5.4 AATTGTCTGAAAATT
Streptococcus suis 05ZYH33 SSU05_0279 -173 5.1 ATTTTTTTGAAAATT
Position: -56
Score: 4.8
Sequence: AATTTTCTGTCAATT
Locus tag: SSUBM407_0253
SSUBM407_0253 -56 4.8 AATTTTCTGTCAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: thrC
Ortholog function: Threonine synthase (EC 4.2.3.1)
Streptococcus agalactiae 2603V/R SAG0055 -100 5.2 AATTTTCTGAAAATC
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_0063 -113 5.2 AATTTTCAGAAAACT
Streptococcus gallolyticus UCN34 GALLO_0042 -61 5.6 AATTTTCTGATAATT
Streptococcus gordonii str. Challis substr. CH1 SGO_0139 -57 5.2 AATTTTCTGATAAAT
Streptococcus mitis B6 smi_0193 -57 5.4 AATTTTCTGAAAAAT
Streptococcus mutans UA159 SMU.70 -59 5.2 AATTGTCTGATAATT
Streptococcus pneumoniae TIGR4 SP_2066 -57 5.4 AATTTTCTGAAAAAT
Streptococcus sanguinis SK36 SSA_0095 -57 5.2 AATTTTCTGATAAAT
Streptococcus suis 05ZYH33 SSU05_0281 -56 4.8 AATTTTCTGTCAATT
Streptococcus thermophilus CNRZ1066 str1878 -59 5.4 AATTTTCTGACAATT
Position: -74
Score: 5.3
Sequence: AATATTCTGATAATT
Locus tag: SSUBM407_0309
SSUBM407_0309 -74 5.3 AATATTCTGATAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: codY
Ortholog function: Nutrient limitation global transcriptional regulator CodY, CodY family
Lactococcus lactis subsp. cremoris SK11 LACR_0168 -101 5.4 AATTTTCTGACAATT
Lactococcus lactis subsp. lactis Il1403 L0243 -101 5.4 AATTTTCTGACAATT
Streptococcus agalactiae 2603V/R SAG1675 -46 5 AATTTTGAGAATATT
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_1848 -80 5.6 AATTTTCTGATAATT
Streptococcus equi subsp. zooepidemicus MGCS10565 Sez_0387 -78 5.6 AATTTTCTGATAATT
Streptococcus gallolyticus UCN34 GALLO_1876 -77 5.6 AATTTTCAGATAATT
Streptococcus gordonii str. Challis substr. CH1 SGO_0431 -71 5.6 AATTTTCAGATAATT
Streptococcus mitis B6 smi_0687 -71 5.6 AATTTTCAGATAATT
Streptococcus mutans UA159 SMU.1824c -75 5.4 AATTTTCTGACAATT
Streptococcus pneumoniae TIGR4 SP_1584 -71 5.6 AATTTTCAGATAATT
Streptococcus pyogenes M1 GAS SPy1777 -80 5.6 AATTTTCTGATAATT
Streptococcus sanguinis SK36 SSA_0566 -71 5.6 AATTTTCAGATAATT
Streptococcus suis 05ZYH33 SSU05_0350 -74 5.3 AATATTCTGATAATT
Streptococcus thermophilus CNRZ1066 str1635 -132 5.4 AATTTTCAGACAATT
Streptococcus uberis 0140J SUB1528 -82 5.6 AATTTTCTGATAATT
Position: -52
Score: 5
Sequence: AATAGTCAGAATATT
Locus tag: SSUBM407_1086
SSUBM407_1086 -52 5 AATAGTCAGAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hom
Ortholog function: Homoserine dehydrogenase (EC 1.1.1.3)
Lactococcus lactis subsp. lactis Il1403 L0090 -41 4.9 AATTATCTTAAAATT
Streptococcus gallolyticus UCN34 GALLO_1241 -118 4.8 ATTTTTCTGTAAATT
Streptococcus mitis B6 smi_0773 -56 5.2 AATTTTCACAAAATT
Streptococcus pneumoniae TIGR4 SP_1361 -56 5.2 AATTTTCACAAAATT
Streptococcus suis 05ZYH33 SSU05_0801 -52 5 AATAGTCAGAATATT
Streptococcus thermophilus CNRZ1066 str0469 -70 4.6 AATATTCTGTCAATT
Position: -85
Score: 4.5
Sequence: TATATTCACAAAATT
Position: -74
Score: 5.3
Sequence: AATTTTCTGAATTTT
Locus tag: SSUBM407_1115
SSUBM407_1115 -85 4.5 TATATTCACAAAATT
-74 5.3 AATTTTCTGAATTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ilvE
Ortholog function: Branched-chain amino acid aminotransferase (EC 2.6.1.42)
Lactococcus lactis subsp. cremoris SK11 LACR_1409 -97 4.8 AATTGTTTGAAATTT
Streptococcus agalactiae 2603V/R SAG1152 -83 4.7 ATTTATCTGAATTTT
Streptococcus gallolyticus UCN34 GALLO_0979 -84 5.3 AATTTTCAGAATTTT
Streptococcus gordonii str. Challis substr. CH1 SGO_1238 -99 5.8 AATTTTCTGAAAATT
Streptococcus mitis B6 smi_0906 -88 5.8 AATTTTCTGAAAATT
Streptococcus mutans UA159 SMU.1203 -83 5.3 AATTTTCAGAATTTT
Streptococcus pneumoniae TIGR4 SP_0856 -88 5.8 AATTTTCTGAAAATT
Streptococcus pyogenes M1 GAS SPy0911 -102 4.6 AATTTTATGATAAAT
Streptococcus sanguinis SK36 SSA_1225 -98 5.8 AATTTTCTGAAAATT
Streptococcus thermophilus CNRZ1066 str0590 -90 4.9 AATTGTCAGAATTTT
Streptococcus uberis 0140J SUB1010 -88 4.8 AATATTCCGAATATT
Position: -43
Score: 5.2
Sequence: AATATTTAGAAAATT
Locus tag: SSUBM407_1160
SSUBM407_1160 -43 5.2 AATATTTAGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: asd
Ortholog function: Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_1025 -60 5.5 AATTTTTAGAAAATT
Streptococcus gallolyticus UCN34 GALLO_1113 -52 5.1 ATTTTTTAGAAAATT
Streptococcus gordonii str. Challis substr. CH1 SGO_1206 -29 5.5 AATTTTTAGAAAATT
Streptococcus mitis B6 smi_1133 -31 5.5 AATTTTTAGAAAATT
Streptococcus pneumoniae TIGR4 SP_1013 -31 5.5 AATTTTTAGAAAATT
Streptococcus sanguinis SK36 SSA_1194 -30 5.5 AATTTTTTGAAAATT
Streptococcus uberis 0140J SUB0939 -54 5.5 AATTTTTAGAAAATT
Position: -54
Score: 5.2
Sequence: AATTGTCTGAATATT
Locus tag: SSUBM407_1203
SSUBM407_1203 -54 5.2 AATTGTCTGAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: serC
Ortholog function: Phosphoserine aminotransferase (EC 2.6.1.52)
Lactococcus lactis subsp. cremoris SK11 LACR_0619 -59 5.6 AATTATCAGAAAATT
Lactococcus lactis subsp. lactis Il1403 L0083 -59 5.6 AATTATCAGAAAATT
Streptococcus gallolyticus UCN34 GALLO_1746 -51 5.3 AAAATTCAGAAAATT
Streptococcus mutans UA159 SMU.1656 -50 5.3 AAAATTCTGAAAATT
Streptococcus suis 05ZYH33 SSU05_0665 -54 5.2 AATTGTCTGAATATT
Streptococcus uberis 0140J SUB0445 -53 5.3 AAAATTCTGAAAATT
Position: -63
Score: 4.6
Sequence: AAAAATCAGAAAATA
Locus tag: SSUBM407_1264
SSUBM407_1264 -63 4.6 AAAAATCAGAAAATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: aroA
Ortholog function: 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)
Streptococcus gallolyticus UCN34 GALLO_1433 -56 4.6 AATTTTCAGTTATTT
Streptococcus mutans UA159 SMU.784 -61 5.2 AATTTTCTAAAATTT
Streptococcus suis 05ZYH33 SSU05_0596 -63 4.6 AAAAATCAGAAAATA
Streptococcus suis 05ZYH33 SSU05_0597 -63 4.6 AAAAATCAGAAAATA
Streptococcus suis 05ZYH33 SSU05_0598 -63 4.6 AAAAATCAGAAAATA
Streptococcus thermophilus CNRZ1066 str0645 -81 4.9 AATATTTTGACAATT
Position: -73
Score: 5.3
Sequence: TATTTTCAGAAAATT
Locus tag: SSUBM407_1440
SSUBM407_1440 -73 5.3 TATTTTCAGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: livH
Ortholog function: Branched-chain amino acids ABC transporter, permease protein 1 (TC 3.A.1.4.1)
Streptococcus agalactiae 2603V/R SAG1581 -56 5.3 AATATTCTGATAATT
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_0444 -98 4.9 ATTTTTCAAAATATT
-65 5.6 AATTTTCTGATAATT
Streptococcus gallolyticus UCN34 GALLO_1759 -66 5.6 AATTTTCTGATAATT
Streptococcus gordonii str. Challis substr. CH1 SGO_1629 -66 5.6 AATTTTCTGATAATT
Streptococcus mitis B6 smi_1414 -61 5.6 AATTTTCTGATAATT
Streptococcus mutans UA159 SMU.1668 -66 5.3 AATATTCAGATAATT
Streptococcus pneumoniae TIGR4 SP_0750 -60 5.6 AATTTTCTGATAATT
Streptococcus sanguinis SK36 SSA_1728 -65 5.2 AATTGTCAGATAATT
Streptococcus suis 05ZYH33 SSU05_1547 -117 4.9 AATTTTCTGTAATTT
-73 5.3 TATTTTCAGAAAATT
Streptococcus thermophilus CNRZ1066 str0360 -65 5.6 AATTTTCTGATAATT
Streptococcus uberis 0140J SUB0433 -66 5.6 AATTTTCTGATAATT
Position: -64
Score: 5.6
Sequence: AATTTTCAGATAATT
Locus tag: SSUBM407_1441
SSUBM407_1441 -64 5.6 AATTTTCAGATAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: livK
Ortholog function: Branched-chain amino acids ABC transporter, substrate-binding protein (TC 3.A.1.4.1)
Streptococcus agalactiae 2603V/R SAG1582 -56 5.3 AATATTCTGATAATT
Streptococcus dysgalactiae subsp. equisimilis GGS_124 SDEG_0443 -98 4.9 ATTTTTCAAAATATT
-65 5.6 AATTTTCTGATAATT
Streptococcus gallolyticus UCN34 GALLO_1760 -66 5.6 AATTTTCTGATAATT
Streptococcus gordonii str. Challis substr. CH1 SGO_1630 -66 5.6 AATTTTCTGATAATT
Streptococcus mitis B6 smi_1415 -61 5.6 AATTTTCTGATAATT
Streptococcus mutans UA159 SMU.1669 -66 5.3 AATATTCAGATAATT
Streptococcus pneumoniae TIGR4 SP_0749 -60 5.6 AATTTTCTGATAATT
Streptococcus sanguinis SK36 SSA_1729 -65 5.2 AATTGTCAGATAATT
Streptococcus suis 05ZYH33 SSU05_1548 -64 5.6 AATTTTCAGATAATT
Streptococcus thermophilus CNRZ1066 str0359 -65 5.6 AATTTTCTGATAATT
Streptococcus uberis 0140J SUB0432 -66 5.6 AATTTTCTGATAATT
Position: -129
Score: 4.6
Sequence: GTTTTTCTGAAATTT
Locus tag: SSUBM407_1684
SSUBM407_1684 -129 4.6 GTTTTTCTGAAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: thrA
Ortholog function: Aspartokinase (EC 2.7.2.4)
Lactococcus lactis subsp. cremoris SK11 LACR_0783 -71 5.6 AATTATCTGAAAATT
Lactococcus lactis subsp. lactis Il1403 L0097 -70 5.6 AATTATCTGAAAATT
Streptococcus agalactiae 2603V/R SAG0339 -52 4.9 AATTTTCTGACTTTT
Streptococcus gallolyticus UCN34 GALLO_0331 -52 5.3 AATTTTCAGAATTTT
Streptococcus gordonii str. Challis substr. CH1 SGO_1701 -38 4.5 AATTGTTTGAATAAT
Streptococcus mutans UA159 SMU.1748 -53 5.3 AATTTTCTGAATTTT
Streptococcus sanguinis SK36 SSA_1943 -47 5.3 AATTTTCAGAATTTT
Streptococcus suis 05ZYH33 SSU05_1811 -123 4.6 GTTTTTCTGAAATTT
Streptococcus thermophilus CNRZ1066 str0378 -56 5.1 AATTATCAGAATTTT
Streptococcus uberis 0140J SUB0316 -26 5 AATATTCATAAAATT
Position: -80
Score: 5.8
Sequence: AATTTTCAGAAAATT
Locus tag: SSUBM407_1754
SSUBM407_1754 -80 5.8 AATTTTCAGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ilvB
Ortholog function: Acetolactate synthase large subunit (EC 2.2.1.6)
Lactococcus lactis subsp. cremoris SK11 LACR_1311 -86 4.9 AATATTCTGACAAAT
Lactococcus lactis subsp. lactis Il1403 L0078 -86 4.9 AATATTCTGACAAAT
Streptococcus gallolyticus UCN34 GALLO_0305 -42 5.2 AATTTTTAGATAATT
Streptococcus gordonii str. Challis substr. CH1 SGO_0526 -249 5.8 AATTTTCTGAAAATT
-27 5.1 AATTTTTTGACAATT
Streptococcus mitis B6 smi_1825 -93 5.3 AAAATTCAGAAAATT
Streptococcus mutans UA159 SMU.231 -42 5.5 AATTTTTTGAAAATT
Streptococcus pneumoniae TIGR4 SP_0445 -93 5.3 AAAATTCAGAAAATT
Streptococcus sanguinis SK36 SSA_1970 -37 5.5 AATTTTTAGAAAATT
Streptococcus suis 05ZYH33 SSU05_1888 -296 5.8 AATTTTCAGAAAATT
Streptococcus thermophilus CNRZ1066 str1873 -27 5.2 AATTTTTAGATAATT
Position: -59
Score: 4.4
Sequence: AAATATTAGAAAATA
Locus tag: SSUBM407_1807
SSUBM407_1807 -59 4.4 AAATATTAGAAAATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yfjA
Ortholog function: Conserved hypothetical protein
Lactococcus lactis subsp. cremoris SK11 LACR_0616 -82 4.4 ATTTTGTTGAAAATT
Streptococcus gordonii str. Challis substr. CH1 SGO_0911 -87 5.1 TATATTCAGAAAATT
Streptococcus mitis B6 smi_1213 -259 5.3 AATTTTCAGAAAATA
Streptococcus sanguinis SK36 SSA_0983 -87 4.5 TATATTGAGAAAATT
Streptococcus sanguinis SK36 SSA_0983 -269 5.3 AATTTTCAGAAAATA
Streptococcus thermophilus CNRZ1066 str1199 -80 5 AATATTCCGAAAATT
Position: -306
Score: 5.4
Sequence: ATTTTTCAGAAAATT
Locus tag: SSUBM407_1811
SSUBM407_1811 -306 5.4 ATTTTTCAGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: leuA
Ortholog function: 2-isopropylmalate synthase (EC 2.3.3.13)
Streptococcus gallolyticus UCN34 GALLO_0758 -266 5 AGTATTCAGAAAATT
Streptococcus mitis B6 smi_1218 -259 5.3 AATTTTCAGAAAATA
Streptococcus mutans UA159 SMU.1384 -246 5.4 ATTTTTCAGAAAATT
Streptococcus sanguinis SK36 SSA_0975 -269 5.3 AATTTTCAGAAAATA
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