Propagation of CcpA regulog to Bacillus megaterium QM B1551
| Source regulog: | CcpA - Bacillales |
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | |
| Biological process: | Carbon catabolism |
| Effector: | HPr, phosphocarrier protein |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Bacillus megaterium QM B1551 |
| Orthologous TF(s) | BMQ_4818 |
| Regulated genes | 54 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -60
Score: 4.5 Sequence: ATGAAAGCGTTTAATC
Locus tag: BMQ_0202
|
||||
| BMQ_0202 | -60 | 4.5 | ATGAAAGCGTTTAATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: mtlA | ||||
| Ortholog function: PTS family mannitol-permease II, BC component | ||||
| Anoxybacillus flavithermus WK1 | Aflv_1566 | -58 | 4.5 | CTGTAAGCGCTTTAAT |
| Bacillus amyloliquefaciens FZB42 | RBAM_004230 | -96 | 4.6 | TTGTAAGCGTTTTATG |
| Bacillus halodurans C-125 | BH3854 | -39 | 4.3 | ATGAGAGCGCTTTATT |
| Bacillus licheniformis DSM 13 | BLi00505 | -94 | 4.4 | CTGTAAGCGTTTTAAT |
| Bacillus pumilus SAFR-032 | BPUM_0369 | -106 | 4.1 | GTGAAAGCGTTTTACG |
| Bacillus subtilis subsp. subtilis str. 168 | BSU03981 | -95 | 4 | CTGTAAGCGTTTTAAC |
| Geobacillus kaustophilus HTA426 | GK1948 | -54 | 4.8 | TTGTAAGCGTTTTAAG |
| Oceanobacillus iheyensis HTE831 | OB2603 | -75 | 4.4 | TTGTAAGCGGATTCCT |
| Paenibacillus sp. JDR-2 | Pjdr2_6226 | -33 | 4.1 | AAGAAAGCGATTTTAT |
|
Position: -169
Score: 5 Sequence: TTGACAACGCTTTCAT
Position: -36
Score: 4.2 Sequence: TTTTAATCGTTTTCAT
Locus tag: BMQ_0530
|
||||
| BMQ_0530 | -169 | 5 | TTGACAACGCTTTCAT | |
| -36 | 4.2 | TTTTAATCGTTTTCAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glpF | ||||
| Ortholog function: Glycerol uptake facilitator protein | ||||
| Bacillus cereus ATCC 14579 | BC1034 | -191 | 4.7 | TTGACACCGCTTTCAT |
| Bacillus clausii KSM-K16 | ABC3383 | -198 | 4.2 | ATGTATCCGTTTACAA |
| Bacillus licheniformis DSM 13 | BLi00994 | -207 | 4.5 | TTGACAACGCTTTCAC |
| Bacillus pumilus SAFR-032 | BPUM_0882 | -191 | 4.9 | TTGACAACGTTTTCAT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU09280 | -182 | 4.7 | TTGACACCGCTTTCAT |
| Geobacillus kaustophilus HTA426 | GK1359 | -206 | 5.1 | TTGACAGCGTTTTCAA |
| Oceanobacillus iheyensis HTE831 | OB2476 | -164 | 4.7 | TTGACAACGCTTTCAG |
|
Position: -137
Score: 4.3 Sequence: ATGAAAGGGTTTTCGT
Position: -42
Score: 4.3 Sequence: AAGAAAACGGTTTCAC
Locus tag: BMQ_0560
|
||||
| BMQ_0560 | -137 | 4.3 | ATGAAAGGGTTTTCGT | |
| -42 | 4.3 | AAGAAAACGGTTTCAC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: msmX | ||||
| Ortholog function: Maltose/maltodextrin transport ATP-binding protein (EC 3.6.3.19) | ||||
| Anoxybacillus flavithermus WK1 | Aflv_2303 | -30 | 4.4 | ATGAAATCGATTACAT |
| Bacillus clausii KSM-K16 | ABC1514 | -48 | 4.6 | ATGAAAGGGGTTACAA |
| Bacillus halodurans C-125 | BH1140 | -47 | 4.6 | TTGTAAGCGCTACAAT |
| Bacillus licheniformis DSM 13 | BLi01052 | -34 | 4.6 | GTTAAAGCGCTTACAT |
| Bacillus pumilus SAFR-032 | BPUM_0922 | -41 | 4.1 | AGTGAAGCGCTTTCAA |
| Oceanobacillus iheyensis HTE831 | OB1134 | -37 | 4.1 | ATGTAATCGTTAACAC |
|
Position: -68
Score: 5.3 Sequence: TTGAAAACGCTTTCTT
Locus tag: BMQ_0775
|
||||
| BMQ_0775 | -68 | 5.3 | TTGAAAACGCTTTCTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: lrgA | ||||
| Ortholog function: Antiholin-like protein LrgA | ||||
| Bacillus cereus ATCC 14579 | BC5439 | -59 | 5 | ATGTAAACGCTTACTT |
| Bacillus licheniformis DSM 13 | BLi03037 | -68 | 4.8 | TTGAAAACGCTTTTTT |
| Bacillus pumilus SAFR-032 | BPUM_2534 | -68 | 4.5 | TTGTAAACGCTTCATT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU28910 | -68 | 4.9 | TTGTAAGCGCTTTATA |
|
Position: -49
Score: 5.3 Sequence: ATGAAAGCGCTTTAAA
Locus tag: BMQ_0803
|
||||
| BMQ_0803 | -49 | 5.3 | ATGAAAGCGCTTTAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glsA1 | ||||
| Ortholog function: Glutaminase (EC 3.5.1.2) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_002800 | -62 | 5 | TTGAAAACGTTTTCCA |
| Bacillus halodurans C-125 | BH2717 | -32 | 5.3 | ATGTAAACGCTTTCAT |
| Bacillus licheniformis DSM 13 | BLi00274 | -208 | 4.9 | TTGAAAACGCTTATAT |
| Bacillus pumilus SAFR-032 | BPUM_0244 | -216 | 5.2 | ATGTAAGCGTTTTCTT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU02430 | -81 | 4.4 | ATGAAAGCGTTTAACG |
|
Position: -42
Score: 5.1 Sequence: ATGTAAGCGTTAACAA
Locus tag: BMQ_0833
|
||||
| BMQ_0833 | -42 | 5.1 | ATGTAAGCGTTAACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: dctA | ||||
| Ortholog function: C4-dicarboxylate transport protein | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_004800 | -54 | 5.3 | TTGAAAACGCTATCAT |
| Bacillus pumilus SAFR-032 | BPUM_0419 | -72 | 4.8 | TTGAAATCGCTATCAT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU04470 | -64 | 5.3 | ATGAAAACGCTATCAT |
|
Position: -33
Score: 5.1 Sequence: ATGAAAGCGGATTCAA
Locus tag: BMQ_0850
|
||||
| BMQ_0850 | -33 | 5.1 | ATGAAAGCGGATTCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: citH | ||||
| Ortholog function: Ca2+/citrate complex secondary transporter | ||||
| Bacillus cereus ATCC 14579 | BC0562 | -36 | 5.1 | TTGAAAGCGCAATCAT |
|
Position: -37
Score: 4.6 Sequence: GTGTAAACGGTTACAT
Locus tag: BMQ_0921
|
||||
| BMQ_0921 | -37 | 4.6 | GTGTAAACGGTTACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rbsR | ||||
| Ortholog function: Ribose operon repressor, LacI family | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_033080 | -33 | 5 | ATGTAAACGGTTACAT |
| Bacillus pumilus SAFR-032 | BPUM_3263 | -38 | 4.2 | GTGTAAACGGTTACAC |
| Bacillus subtilis subsp. subtilis str. 168 | BSU35910 | -34 | 5 | ATGTAAACGGTTACAT |
| Oceanobacillus iheyensis HTE831 | OB2577 | -68 | 4.8 | ATCAAAACGCTTTCAT |
| -40 | 4.1 | CTGAAACCGGTTCCAT | ||
|
Position: -28
Score: 4.7 Sequence: ATGAAAACGGAAACAA
Locus tag: BMQ_0956
|
||||
| BMQ_0956 | -28 | 4.7 | ATGAAAACGGAAACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: treP | ||||
| Ortholog function: PTS system, trehalose-specific enzyme II, BC component (EC 2.7.1.69) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_007970 | 318 | 4 | GTGAAAACGCTTGCGG |
| Bacillus cereus ATCC 14579 | BC0631 | 234 | 4.4 | TTGATAACGCTTGCAG |
| Bacillus halodurans C-125 | BH2216 | 136 | 4.4 | TTGAAAGCCTTGACAT |
| 318 | 4.4 | GTGAAAACGCTTGCTG | ||
| Bacillus licheniformis DSM 13 | BLi00796 | 318 | 4.6 | GTGAAAACGCTTGCAG |
| Bacillus subtilis subsp. subtilis str. 168 | BSU07800 | 318 | 4.6 | GTGAAAACGCTTGCAG |
|
Position: -104
Score: 4.9 Sequence: ATGTAAACGTTATCTA
Position: -83
Score: 4.4 Sequence: ATTTAAACGTTTTAAA
Locus tag: BMQ_1378
|
||||
| BMQ_1378 | -104 | 4.9 | ATGTAAACGTTATCTA | |
| -83 | 4.4 | ATTTAAACGTTTTAAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ylbB | ||||
| Ortholog function: CBS domain protein | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_014810 | -95 | 4.3 | ATGAAAGCGTTACACT |
| Bacillus licheniformis DSM 13 | BLi01712 | -142 | 4.5 | ATGAAAGCGTTAAACT |
| Bacillus pumilus SAFR-032 | BPUM_1387 | -116 | 4.5 | ATGAAAGCGTTAAACT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU14950 | -97 | 4.5 | ATGAAAGCGTTAAACT |
|
Position: -143
Score: 5 Sequence: ATGAAAGCGCTTAATA
Locus tag: BMQ_1588
|
||||
| BMQ_1588 | -143 | 5 | ATGAAAGCGCTTAATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: levD | ||||
| Ortholog function: PTS-system fructose-specific enzyme IIA component (EC 2.7.1.69) | ||||
| Bacillus licheniformis DSM 13 | BLi02831 | -81 | 4.9 | ATGAAAACGCTTAATA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU27070 | -80 | 4.6 | ATGAAAACGCTTAACA |
|
Position: 34
Score: 5.1 Sequence: TTGAAAGCGCAAACAA
Locus tag: BMQ_1864
|
||||
| BMQ_1864 | 34 | 5.1 | TTGAAAGCGCAAACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: xylA | ||||
| Ortholog function: Xylose isomerase (EC 5.3.1.5) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_017350 | 34 | 5.1 | TTGAAAGCGCAAACAA |
| Bacillus clausii KSM-K16 | ABC0572 | -72 | 4.7 | TTGACACCGCTTACAA |
| Bacillus halodurans C-125 | BH2757 | -33 | 4.7 | TTGATAACGCTTACTT |
| Bacillus licheniformis DSM 13 | BLi04048 | -109 | 4.5 | TTGAAAGCGATTAATT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU17600 | 34 | 4.7 | TTGGAAGCGCAAACAA |
| Geobacillus kaustophilus HTA426 | GK1875 | -59 | 5 | ATGAAAGCGTTATAAT |
|
Position: -87
Score: 4.7 Sequence: ATGATAACGTTTTCTT
Locus tag: BMQ_1883
|
||||
| BMQ_1883 | -87 | 4.7 | ATGATAACGTTTTCTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: acoR | ||||
| Ortholog function: Transcriptional activator of acetoin dehydrogenase operon AcoR | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_008340 | -67 | 5 | TTGAAAGCGCTTTATT |
| Bacillus cereus ATCC 14579 | BC2766 | -78 | 5 | TTGAAAACGCTTTTAT |
| Bacillus halodurans C-125 | BH1826 | -117 | 4.7 | TTGTTAGCGCTTTCTT |
| Bacillus licheniformis DSM 13 | BLi00853 | -51 | 5.1 | TTGAAAGCGCTTTTAT |
| Bacillus pumilus SAFR-032 | BPUM_0455 | -59 | 5.1 | TTGAAAGCGCTTTTAT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU08100 | -67 | 5 | TTGAAAGCGCTTTATT |
|
Position: -33
Score: 4.8 Sequence: ATGAAAACGCTTTTTT
Locus tag: BMQ_2130
|
||||
| BMQ_2130 | -33 | 4.8 | ATGAAAACGCTTTTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fruR | ||||
| Ortholog function: Transcriptional regulator of fructose utilization, DeoR family | ||||
| Anoxybacillus flavithermus WK1 | Aflv_1478 | -24 | 4.6 | ATGTAAGCGATTTAAA |
| Bacillus amyloliquefaciens FZB42 | RBAM_014120 | -28 | 4.5 | ATGAATACGTTTCCAA |
| Bacillus cereus ATCC 14579 | BC3720 | -46 | 4.3 | TTGTGACCGTTTTCAT |
| Bacillus licheniformis DSM 13 | BLi01652 | -29 | 4.6 | ATGAAGGCGTTTCCAA |
| Bacillus pumilus SAFR-032 | BPUM_1334 | -30 | 4.7 | ATGAATACGTTTTCAA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU14380 | -29 | 4.7 | ATGAATACGTTTTCAT |
| Oceanobacillus iheyensis HTE831 | OB0840 | -113 | 5 | TTGAAAGCGTTTTATT |
|
Position: -88
Score: 5 Sequence: TTGAAAGCGTTTTATT
Locus tag: BMQ_2757
|
||||
| BMQ_2757 | -88 | 5 | TTGAAAGCGTTTTATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: msmR | ||||
| Ortholog function: Transcriptional regulator of alpha-galactoside utilization, LacI family | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_027180 | -91 | 4.8 | TTGAAAACGCTTACTC |
| Bacillus halodurans C-125 | BH2227 | -95 | 4.5 | TTGAAAACGCTTACCC |
| Bacillus licheniformis DSM 13 | BLi01139 | -75 | 4.2 | TTGAAAACTTTTACCT |
| Bacillus pumilus SAFR-032 | BPUM_1754 | -78 | 4.4 | TTGAAAGCGCTTTACC |
| Bacillus subtilis subsp. subtilis str. 168 | BSU30260 | -86 | 4.8 | TTGTAACCGCTTACTT |
|
Position: -168
Score: 5 Sequence: AAGAAAGCGTTTACAA
Locus tag: BMQ_2820
|
||||
| BMQ_2820 | -168 | 5 | AAGAAAGCGTTTACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gntR | ||||
| Ortholog function: Gluconate operon transcriptional repressor | ||||
| Bacillus licheniformis DSM 13 | BLi04286 | -81 | 4.7 | ATGAAAGTGTTTGCAT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU40050 | -81 | 4.7 | ATGAAAGTGTTTGCAT |
| Oceanobacillus iheyensis HTE831 | OB3190 | -79 | 4.3 | ATTCAAGCGTTTACAA |
|
Position: -236
Score: 4.4 Sequence: TATAAAACGCTTTCAA
Locus tag: BMQ_2897
|
||||
| BMQ_2897 | -236 | 4.4 | TATAAAACGCTTTCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: odhA | ||||
| Ortholog function: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_019130 | -101 | 4.7 | TTGGAAGCGTTTTTAT |
| Bacillus cereus ATCC 14579 | BC1252 | -101 | 4.3 | AAGAAAACATTTACAT |
| Bacillus clausii KSM-K16 | ABC2114 | -63 | 4.8 | TTGTAAGCGCTTGAAA |
| Bacillus halodurans C-125 | BH2206 | -64 | 5 | ATGAAAGCGTTATAAA |
| Bacillus licheniformis DSM 13 | BLi02260 | -100 | 4.3 | GTGGAAGCGTTTTTAT |
| Bacillus pumilus SAFR-032 | BPUM_1862 | -101 | 4.7 | TTGGAAGCGTTTTATT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU19370 | -101 | 4.7 | TTGGAAGCGTTTTTAT |
| Geobacillus kaustophilus HTA426 | GK1023 | -123 | 4.1 | GTGAAAACGTTTATAC |
| Oceanobacillus iheyensis HTE831 | OB1089 | -51 | 4.3 | TTTGAACCGTTTTCAT |
| Paenibacillus sp. JDR-2 | Pjdr2_4724 | -242 | 4.4 | ATGAATACGCTTTAAA |
|
Position: -64
Score: 4.9 Sequence: ATGAAAGTGTTTACAT
Locus tag: BMQ_3434
|
||||
| BMQ_3434 | -64 | 4.9 | ATGAAAGTGTTTACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: BH0705 | ||||
| Ortholog function: Uronate isomerase (EC 5.3.1.12) | ||||
| Bacillus halodurans C-125 | BH0705 | -76 | 4.7 | TTGAAAAGGTTTACAA |
|
Position: -260
Score: 4.5 Sequence: ATGAAATCGATTTCAT
Position: -88
Score: 4.5 Sequence: ATGAAATCGATTTCAT
Locus tag: BMQ_3471
|
||||
| BMQ_3471 | -260 | 4.5 | ATGAAATCGATTTCAT | |
| -88 | 4.5 | ATGAAATCGATTTCAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: iolD | ||||
| Ortholog function: Epi-inositol hydrolase (EC 3.7.1.-) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_036750 | -172 | 5.1 | ATGAAAACGTTGTCAT |
| Bacillus clausii KSM-K16 | ABC0425 | -35 | 4.5 | ATGAAAGCGGTTTACT |
| Bacillus halodurans C-125 | BH2318 | -281 | 4.8 | TTGAAAACGATTTCAG |
| -142 | 4.5 | CTGAAAGCGCTTTTAA | ||
| -44 | 4.5 | ATGAAATCGATTACAA | ||
| Bacillus licheniformis DSM 13 | BLi04248 | -176 | 4.7 | ATGGAAACGTTGTCAT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU39730 | -172 | 5.1 | ATGAAAACGTTGTCAT |
|
Position: -186
Score: 4.5 Sequence: CTGAAAGCGTTTTTAA
Position: -102
Score: 4.5 Sequence: ATGAAATCGATTTCAT
Locus tag: BMQ_3477
|
||||
| BMQ_3477 | -186 | 4.5 | CTGAAAGCGTTTTTAA | |
| -102 | 4.5 | ATGAAATCGATTTCAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: iolE | ||||
| Ortholog function: Inosose dehydratase (EC 4.2.1.44) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_036740 | -172 | 5.1 | ATGAAAACGTTGTCAT |
| Bacillus clausii KSM-K16 | ABC0426 | -154 | 4.4 | ATGAAAGTGCTGCCAA |
| Bacillus halodurans C-125 | BH2317 | -281 | 4.8 | TTGAAAACGATTTCAG |
| -142 | 4.5 | CTGAAAGCGCTTTTAA | ||
| -44 | 4.5 | ATGAAATCGATTACAA | ||
| Bacillus licheniformis DSM 13 | BLi04247 | -176 | 4.7 | ATGGAAACGTTGTCAT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU39720 | -172 | 5.1 | ATGAAAACGTTGTCAT |
|
Position: -66
Score: 5.2 Sequence: ATGAAAGCGTTTTAAA
Locus tag: BMQ_3539
|
||||
| BMQ_3539 | -66 | 5.2 | ATGAAAGCGTTTTAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: araE | ||||
| Ortholog function: Arabinose-proton symporter | ||||
| Bacillus licheniformis DSM 13 | BLi02065 | -178 | 5.2 | TTGAAAGCGTTTAAAA |
| -93 | 5.1 | TTGAAAGCGCTTTTAT | ||
| Bacillus pumilus SAFR-032 | BPUM_2326 | -35 | 4.7 | ATGAAAGCGGTTAATT |
| Oceanobacillus iheyensis HTE831 | OB2796 | -88 | 5 | ATGAAAGCGTTTTATA |
|
Position: -295
Score: 4 Sequence: AAGGAAGCGCTTTCCG
Locus tag: BMQ_3543
|
||||
| BMQ_3543 | -295 | 4 | AAGGAAGCGCTTTCCG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: araR | ||||
| Ortholog function: Transcriptional repressor of arabinoside utilization operon, GntR family | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_031330 | -229 | 4.9 | ATAAAAACGCTTACAA |
| -59 | 4.6 | ATGAAAGGGCTTACTA | ||
| Bacillus licheniformis DSM 13 | BLi02061 | -265 | 4 | CTGATAGCGATTTCAT |
| -239 | 4 | AAGAAAGCATTTTCCT | ||
| Bacillus pumilus SAFR-032 | BPUM_2330 | -254 | 4.9 | TTGATAGCGGTTTCAA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU33970 | -115 | 4.4 | AGTAAAGCGTTTTCAT |
| Oceanobacillus iheyensis HTE831 | OB2800 | -289 | 4.1 | CTGAAAACGCCTACAT |
|
Position: -142
Score: 4.9 Sequence: ATGAAAGCGTATTAAT
Locus tag: BMQ_4017
|
||||
| BMQ_4017 | -142 | 4.9 | ATGAAAGCGTATTAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sacP | ||||
| Ortholog function: PTS sucrose-specific enzyme IIBC component | ||||
| Anoxybacillus flavithermus WK1 | Aflv_2785 | -147 | 4.7 | ATGAAAGCGGATAAAA |
| Bacillus amyloliquefaciens FZB42 | RBAM_035290 | -175 | 4.7 | ACGAAAGCGCTATCAT |
| -151 | 5 | ATGAAAGCGCATTAAA | ||
| Bacillus cereus ATCC 14579 | BC0775 | -158 | 4.7 | AAGAAAGCGTTGACAA |
| Bacillus halodurans C-125 | BH1856 | -170 | 4.3 | GAGAAAGCGTTGACAA |
| Bacillus licheniformis DSM 13 | BLi04017 | -154 | 4.9 | ATGAAAGCGTATTAAA |
| Bacillus pumilus SAFR-032 | BPUM_3452 | -145 | 5.1 | ATGAAAGCGTAATCAA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU38050 | -151 | 5 | ATGAAAGCGTATTCTT |
|
Position: -63
Score: 4.8 Sequence: ATGAAAGCGCAGTCTA
Locus tag: BMQ_4205
|
||||
| BMQ_4205 | -63 | 4.8 | ATGAAAGCGCAGTCTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sucC | ||||
| Ortholog function: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_015920 | -52 | 4.8 | ATGAAAGCGCAGTCTA |
| Bacillus licheniformis DSM 13 | BLi01829 | -53 | 4.8 | ATGAAAGCGCAGTCTA |
| Bacillus pumilus SAFR-032 | BPUM_1507 | -57 | 4.8 | ATGAAAGCGCAGTCTA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU16090 | -51 | 4.8 | ATGAAAGCGCAGTCTA |
| Geobacillus kaustophilus HTA426 | GK1208 | -47 | 4.2 | ATGAAAGCGCTAAGAC |
|
Position: -92
Score: 5.1 Sequence: TAGAAAGCGTTTTCAA
Locus tag: BMQ_4289
|
||||
| BMQ_4289 | -92 | 5.1 | TAGAAAGCGTTTTCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yngH | ||||
| Ortholog function: Biotin carboxylase of methylcrotonyl-CoA carboxylase (EC 6.3.4.14) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_018370 | -44 | 5.2 | ATGAAAACGTTTACTA |
| Bacillus clausii KSM-K16 | ABC1507 | -77 | 4.6 | TTGGTAACGCTTTCAT |
| Bacillus halodurans C-125 | BH1132 | -251 | 4.6 | AAGAAACCGTTTACAA |
| Bacillus licheniformis DSM 13 | BLi02143 | -35 | 5.3 | ATGAAAACGCTTTCTA |
| Bacillus pumilus SAFR-032 | BPUM_1784 | -35 | 4.8 | ATGTAAACGCTTACCA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU18240 | -41 | 4.8 | ATGTAAACGCTTTCCT |
|
Position: -242
Score: 5.3 Sequence: TTGAAAACGCTTTCTA
Locus tag: BMQ_4290
|
||||
| BMQ_4290 | -242 | 5.3 | TTGAAAACGCTTTCTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ylbP | ||||
| Ortholog function: Uncharacterized N-acetyltransferase (EC 2.3.1.-) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_014960 | -46 | 4.9 | ATTAAAGCGTTTACAA |
| Bacillus clausii KSM-K16 | ABC2369 | -70 | 4.2 | TTTAATGCGTTTTCAT |
| Bacillus licheniformis DSM 13 | BLi01727 | -48 | 4.5 | AAAAAAGCGTTTACAA |
| Bacillus pumilus SAFR-032 | BPUM_1403 | -58 | 4.8 | ATGAAAACGCCTTCAA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU15100 | -48 | 4.4 | AATAAAGCGTTTACAA |
| Oceanobacillus iheyensis HTE831 | OB1458 | -59 | 4.3 | TAGGAAGCGTTATCTT |
|
Position: -57
Score: 4 Sequence: GTGATTGCGCTTTCAA
Locus tag: BMQ_4327
|
||||
| BMQ_4327 | -57 | 4 | GTGATTGCGCTTTCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ndk | ||||
| Ortholog function: Nucleoside diphosphate kinase (EC 2.7.4.6) | ||||
| Anoxybacillus flavithermus WK1 | Aflv_1096 | -104 | 4.3 | ATTAAATCGTTTTCAT |
| Bacillus amyloliquefaciens FZB42 | RBAM_020890 | -37 | 4.5 | TTGAAAGCCTATACAT |
| Bacillus clausii KSM-K16 | ABC1890 | -70 | 4.4 | TTGTTAGCGTTTTCCT |
| Bacillus licheniformis DSM 13 | BLi02408 | -39 | 4.5 | TTGAAAGCCTATACAT |
| Bacillus pumilus SAFR-032 | BPUM_2004 | -43 | 4.3 | ATGTAAGCCTATACAT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU22730 | -38 | 4.1 | GTGAAAGCCTATACAT |
| Geobacillus kaustophilus HTA426 | GK2209 | -105 | 4.4 | TTATTAGCGCTTTCAA |
|
Position: -152
Score: 4.9 Sequence: TTGAAAACACTTTCAT
Locus tag: BMQ_4396
|
||||
| BMQ_4396 | -152 | 4.9 | TTGAAAACACTTTCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: drm | ||||
| Ortholog function: Phosphopentomutase (EC 5.4.2.7) | ||||
| Anoxybacillus flavithermus WK1 | Aflv_0998 | -114 | 4.9 | ATGAAAACGTTTTATA |
| Bacillus amyloliquefaciens FZB42 | RBAM_021610 | -74 | 4.5 | ATGTAAACGGTTTATA |
| Bacillus cereus ATCC 14579 | BC4087 | -222 | 4.5 | AAGAAAGCGTAAACAT |
| Bacillus licheniformis DSM 13 | BLi02500 | -99 | 4.1 | GTGTAAACGGTTTATA |
| Bacillus pumilus SAFR-032 | BPUM_2081 | -82 | 4.5 | TTGTAAACGGTTTATA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU23500 | -77 | 4.7 | ATGAAAACGGTTTATA |
|
Position: -137
Score: 4.3 Sequence: AAGATAGCGTTTTCAG
Locus tag: BMQ_4497
|
||||
| BMQ_4497 | -137 | 4.3 | AAGATAGCGTTTTCAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yqgY | ||||
| Ortholog function: Uncharacterized short membrane protein | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_023110 | -73 | 4.8 | ATGAAAATGTTTACAT |
| Bacillus clausii KSM-K16 | ABC2500 | -76 | 4.4 | AAGAAAGCATTTACAA |
| Bacillus licheniformis DSM 13 | BLi02652 | -71 | 4.8 | ATGAAAATGTTTACAT |
| Bacillus pumilus SAFR-032 | BPUM_2208 | -76 | 4.6 | ATGTAAATGTTTACAT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU24780 | -72 | 4.8 | ATGAAAATGTTTACAT |
| Oceanobacillus iheyensis HTE831 | OB1915 | -75 | 4.6 | ATAGAAACGTTTACAA |
| Paenibacillus sp. JDR-2 | Pjdr2_3908 | -124 | 4.3 | ATCATAACGCTTTCAA |
|
Position: -179
Score: 4.8 Sequence: ATTAAAGCGCTATCAT
Locus tag: BMQ_4498
|
||||
| BMQ_4498 | -179 | 4.8 | ATTAAAGCGCTATCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yqgX | ||||
| Ortholog function: Similar to Hydroxyacylglutathione hydrolase, but in an organism lacking glutathione biosynthesis | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_023120 | -109 | 4.4 | TTTTAACCGTTTTCAT |
| Bacillus clausii KSM-K16 | ABC2499 | -98 | 4.3 | TTGTACCCGTTTTCAT |
| Bacillus halodurans C-125 | BH2820 | -112 | 4.5 | TTTTAAACGTTTTCTT |
| Bacillus licheniformis DSM 13 | BLi02653 | -105 | 4.4 | TTTTAACCGTTTTCAT |
| Bacillus pumilus SAFR-032 | BPUM_2209 | -103 | 4.4 | TTTTAACCGTTTTCAT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU24790 | -84 | 4.3 | TCGATAGCGTTTTCAT |
|
Position: -45
Score: 4.7 Sequence: ATGATAGCGCTTTAAT
Locus tag: BMQ_4499
|
||||
| BMQ_4499 | -45 | 4.7 | ATGATAGCGCTTTAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yqgW | ||||
| Ortholog function: Alkaliphily related protein | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_023130 | -61 | 4.8 | ATGAAAACGGTTAAAA |
| Bacillus clausii KSM-K16 | ABC2498 | -57 | 4.5 | ATGAAAACGGGTACAA |
| Bacillus halodurans C-125 | BH2819 | -168 | 4.5 | AAGAAAACGTTTAAAA |
| Bacillus licheniformis DSM 13 | BLi02654 | -66 | 4.8 | ATGAAAACGGTTAAAA |
| Bacillus pumilus SAFR-032 | BPUM_2210 | -40 | 4.8 | ATGAAAACGGTTAAAA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU24800 | -88 | 4.8 | ATGAAAACGCTATCGA |
|
Position: -35
Score: 5 Sequence: ATGTAAGCGTATACAT
Locus tag: BMQ_4541
|
||||
| BMQ_4541 | -35 | 5 | ATGTAAGCGTATACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yngJ | ||||
| Ortholog function: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10) | ||||
| Bacillus clausii KSM-K16 | ABC1506 | -77 | 4.6 | TTGGTAACGCTTTCAT |
| Bacillus halodurans C-125 | BH1130 | -105 | 4.7 | TTGGTAGCGCTTACAT |
| Geobacillus kaustophilus HTA426 | GK1597 | -103 | 4.9 | TTGAAAACGCTTCAAA |
|
Position: -294
Score: 4.5 Sequence: AAGTAAACGCTTACTT
Position: -227
Score: 4.6 Sequence: TAGTAAGCGTTAACAA
Locus tag: BMQ_4725
|
||||
| BMQ_4725 | -294 | 4.5 | AAGTAAACGCTTACTT | |
| -227 | 4.6 | TAGTAAGCGTTAACAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sdhC | ||||
| Ortholog function: Succinate dehydrogenase cytochrome b558 subunit | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_025520 | -143 | 4.3 | ATGTACACGTTTTCTT |
| Bacillus cereus ATCC 14579 | BC4518 | -178 | 4.3 | ATGTATACGTTTTCTT |
| Bacillus clausii KSM-K16 | ABC2664 | -190 | 4.3 | TTGAATCCGTTTTCTT |
| Bacillus licheniformis DSM 13 | BLi02994 | -143 | 4.4 | ATGTACGCGTTTTCTT |
| Bacillus pumilus SAFR-032 | BPUM_2503 | -139 | 4.2 | ATGTACGCGGTTTCTT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU28450 | -139 | 4.4 | ATGTACGCGTTTTCTT |
|
Position: -169
Score: 4.6 Sequence: ATGTAAGCATTTTCTT
Locus tag: BMQ_4770
|
||||
| BMQ_4770 | -169 | 4.6 | ATGTAAGCATTTTCTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: mmgD | ||||
| Ortholog function: Citrate synthase (si) (EC 2.3.3.1) | ||||
| Anoxybacillus flavithermus WK1 | Aflv_0504 | -107 | 4.6 | ATGTAAGCATTTTCTT |
| Anoxybacillus flavithermus WK1 | Aflv_0504 | -107 | 4.6 | ATGTAAGCATTTTCTT |
| Bacillus amyloliquefaciens FZB42 | RBAM_026180 | -114 | 4.6 | ATGTAAGCATTTTCTT |
| Bacillus amyloliquefaciens FZB42 | RBAM_022420 | -43 | 4.6 | GTGTAAGCGTTATCTT |
| Bacillus clausii KSM-K16 | ABC1805 | -63 | 4.9 | ATGTAAGCGCTTTATT |
| Bacillus clausii KSM-K16 | ABC2715 | 174 | 4.6 | TTGGAATCGTTTTCAA |
| Bacillus licheniformis DSM 13 | BLi03062 | -115 | 4.6 | ATGTAAGCATTTTCTT |
| Bacillus licheniformis DSM 13 | BLi03062 | -115 | 4.6 | ATGTAAGCATTTTCTT |
| Bacillus pumilus SAFR-032 | BPUM_2556 | -111 | 4.6 | ATGTAAGCATTTTCTT |
| -69 | 4.5 | TGGATAGCGCTTTCAA | ||
| Bacillus pumilus SAFR-032 | BPUM_2556 | -111 | 4.6 | ATGTAAGCATTTTCTT |
| -69 | 4.5 | TGGATAGCGCTTTCAA | ||
| Bacillus subtilis subsp. subtilis str. 168 | BSU24140 | -37 | 4.9 | TTGTAAGCGCTGTCTA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU29140 | -114 | 4.6 | ATGTAAGCATTTTCTT |
| Oceanobacillus iheyensis HTE831 | OB2269 | -39 | 4.4 | TTGACTGCGCTTTCAA |
|
Position: -228
Score: 5 Sequence: ATTAAAGCGTTTTCAA
Locus tag: BMQ_4812
|
||||
| BMQ_4812 | -228 | 5 | ATTAAAGCGTTTTCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: acsA | ||||
| Ortholog function: Acetyl-coenzyme A synthetase (EC 6.2.1.1) | ||||
| Anoxybacillus flavithermus WK1 | Aflv_0462 | 237 | 4.9 | ATGAAAGAGTTTTCAA |
| Bacillus amyloliquefaciens FZB42 | RBAM_026800 | -102 | 4.5 | TATAAAGCGTTTTCAA |
| Bacillus clausii KSM-K16 | ABC2760 | -65 | 4.7 | TTGAAAACGTTACCTT |
| 0 | 4.8 | ATGAAAGCGCTTCCTG | ||
| Bacillus halodurans C-125 | BH3234 | 6 | 4.4 | TTGCAAGCGCTTCCAG |
| Bacillus licheniformis DSM 13 | BLi03119 | 6 | 4.7 | TTGAAAGCGCTGCCAG |
| Bacillus pumilus SAFR-032 | BPUM_2616 | -30 | 4.7 | TTGTAAACGTATGCAA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU29680 | -101 | 4.5 | TATAAAGCGTTTTCAA |
| 6 | 4.8 | TTGAAAGCGTTACCAG | ||
| Oceanobacillus iheyensis HTE831 | OB0022 | -36 | 4.5 | TTGTAATCGTTTGCAA |
| Paenibacillus sp. JDR-2 | Pjdr2_3796 | -56 | 5 | TTGAAAGCGTATTCTT |
|
Position: -72
Score: 5.1 Sequence: TTGAAAACGCTTTAAT
Locus tag: BMQ_4813
|
||||
| BMQ_4813 | -72 | 5.1 | TTGAAAACGCTTTAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: acuA | ||||
| Ortholog function: Acetyltransferase AcuA, acetyl-CoA synthetase inhibitor | ||||
| Anoxybacillus flavithermus WK1 | Aflv_0461 | -70 | 4.7 | ATGAAAACGATTTAAT |
| Bacillus amyloliquefaciens FZB42 | RBAM_026810 | -72 | 4.9 | TTGAAAACGCTTTATA |
| Bacillus licheniformis DSM 13 | BLi03120 | -69 | 4.9 | ATGAAAACGCTTAATA |
| Bacillus pumilus SAFR-032 | BPUM_2617 | -74 | 4.4 | GTGAAACCGTTTTAAT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU29690 | -75 | 4.9 | TTGAAAACGCTTTATA |
|
Position: -49
Score: 5 Sequence: TAGAAAACGCTTTCAT
Locus tag: BMQ_4924
|
||||
| BMQ_4924 | -49 | 5 | TAGAAAACGCTTTCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yngI | ||||
| Ortholog function: Long-chain fatty-acid-CoA ligase (EC 6.2.1.3) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_018380 | -44 | 5.2 | ATGAAAACGTTTACTA |
| Bacillus halodurans C-125 | BH1131 | -251 | 4.6 | AAGAAACCGTTTACAA |
| Bacillus licheniformis DSM 13 | BLi02144 | -35 | 5.3 | ATGAAAACGCTTTCTA |
| Bacillus pumilus SAFR-032 | BPUM_1785 | -35 | 4.8 | ATGTAAACGCTTACCA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU18250 | -41 | 4.8 | ATGTAAACGCTTTCCT |
| Geobacillus kaustophilus HTA426 | GK1598 | -103 | 4.9 | TTGAAAACGCTTCAAA |
| Oceanobacillus iheyensis HTE831 | OB2217 | -64 | 4.9 | TTGTAAGCGGTTACTT |
|
Position: -47
Score: 5.1 Sequence: TTGAAAGCGTTTTTAT
Locus tag: BMQ_5053
|
||||
| BMQ_5053 | -47 | 5.1 | TTGAAAGCGTTTTTAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sigL | ||||
| Ortholog function: DNA-directed RNA polymerase sigma subunit SigL | ||||
| Anoxybacillus flavithermus WK1 | Aflv_2521 | 211 | 4.9 | ATGTAAGCGTTTTTAA |
| Bacillus amyloliquefaciens FZB42 | RBAM_031510 | 567 | 4.5 | TGGAAAGCGCTTACAC |
| Bacillus cereus ATCC 14579 | BC5143 | 488 | 4.6 | ATTGAAGCGCTTACAA |
| Bacillus clausii KSM-K16 | ABC3025 | 544 | 4.1 | TTGACATCGTTTTAAA |
| Bacillus halodurans C-125 | BH3563 | -71 | 4.4 | TCGTAAGCGCTTACAG |
| Bacillus licheniformis DSM 13 | BLi03678 | 250 | 4.4 | TTAAAAGCGCTTTGAA |
| Bacillus pumilus SAFR-032 | BPUM_3063 | 951 | 4.7 | ATGAAACCGCTTACGA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU34200 | 564 | 4.6 | TGGAAAACGCTTTCAG |
| Geobacillus kaustophilus HTA426 | GK3061 | 96 | 4.7 | TTGGAAGCGTTTTTAT |
|
Position: -109
Score: 4.9 Sequence: ATAAAAGCGCTTTCTT
Locus tag: BMQ_5239
|
||||
| BMQ_5239 | -109 | 4.9 | ATAAAAGCGCTTTCTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cstA | ||||
| Ortholog function: Carbon starvation-induced membrane protein | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_025770 | 0 | 4.4 | ATGAATGCGATTACAA |
| Bacillus licheniformis DSM 13 | BLi03019 | -62 | 4.3 | ATGATTGCGCTTACAA |
| Bacillus pumilus SAFR-032 | BPUM_2525 | 0 | 4.6 | ATGAATGCGGTTACAA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU28710 | 0 | 4.6 | ATGAATGCGGTTACAA |