Propagation of SphR regulog to Cyanothece sp. ATCC 51142

Reference regulog properties
Source regulog:	SphR - Cyanobacteria
Regulator type:	Transcription factor
Regulator family:	OmpR
Regulation mode:	repressor (activator)
Biological process:	Phosphate metabolism
Effector:	Inorganic phosphate
Phylum:	Cyanobacteria
Propagated regulon:
Target genome	Cyanothece sp. ATCC 51142
Orthologous TF(s)	cce_3960
Regulated genes	11

Built upon 77 sites [see more]

Predicted regulatory interactions in *Cyanothece sp. ATCC 51142*
	Locus tag	Position	Score	Sequence
Position: -70 Score: 8.4 Sequence: GATAAAAA-(3)-CATAAAGT-(3)-CTTAAACT Locus tag: cce_5174
	cce_5174	-70	8.4	GATAAAAA-(3)-CATAAAGT-(3)-CTTAAACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ppk
Ortholog function: Polyphosphate kinase (EC 2.7.4.1)
Cyanothece sp. ATCC 51142	cce_5174	-70	8.4	GATAAAAA-(3)-CATAAAGT-(3)-CTTAAACT
Cyanothece sp. PCC 8801	PCC8801_1625	-95	7.2	TATTACCT-(3)-TATAGCCT-(3)-GATAGCCT
Cyanothece sp. PCC 7425	Cyan7425_1977	-238	8.4	GTTATCCC-(3)-GTTAATTT-(3)-ATTAAATC

Position: -74 Score: 9.6 Sequence: GTTAATTT-(3)-TTTAATCA-(3)-CTTAAAAT Locus tag: cce_5183
	cce_5183	-74	9.6	GTTAATTT-(3)-TTTAATCA-(3)-CTTAAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ackA
Ortholog function: Acetate kinase (EC 2.7.2.1)
Cyanothece sp. ATCC 51142	cce_5183	-74	9.6	GTTAATTT-(3)-TTTAATCA-(3)-CTTAAAAT
Cyanothece sp. PCC 8801	PCC8801_3887	-183	9.1	CTTTGACC-(3)-GTTTACCA-(3)-CTTAACCT
Microcystis aeruginosa NIES-843	MAE_02800	-66	8.8	TTTTATCT-(3)-CTTAACCT-(3)-TTTGATTA

Position: -83 Score: 7.6 Sequence: TTTTATCT-(3)-GATAATTA-(3)-ATTAATGA Locus tag: cce_0154
	cce_0154	-83	7.6	TTTTATCT-(3)-GATAATTA-(3)-ATTAATGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ndbB
Ortholog function: Type 2 NADH dehydrogenase
Synechococcus sp. PCC 7002	SYNPCC7002_A2120	-309	7.6	CTAAAATT-(3)-TTTTACTA-(3)-TTTGATCA
Cyanothece sp. ATCC 51142	cce_0154	-83	7.6	TTTTATCT-(3)-GATAATTA-(3)-ATTAATGA
Trichodesmium erythraeum IMS101	Tery_3661	-342	7.8	TTTTAATA-(3)-AATTACCC-(3)-CTTAGCCT

Position: -53 Score: 7.5 Sequence: GTTAGATT-(3)-CTTTAAGA-(3)-GTTTAGTT Locus tag: cce_0886
	cce_0886	-53	7.5	GTTAGATT-(3)-CTTTAAGA-(3)-GTTTAGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: pstS
Ortholog function: Phosphate ABC transporter, substrate-binding protein
Cyanothece sp. ATCC 51142	cce_0886	-358	6.9	CTTGAAAA-(3)-TATAAATA-(3)-GTTATCAT
		-53	7.5	GTTAGATT-(3)-CTTTAAGA-(3)-GTTTAGTT
Microcystis aeruginosa NIES-843	MAE_18380	-87	9.5	TTTATTCA-(3)-CTTAACCT-(3)-CTTTACCA

Position: -109 Score: 9.7 Sequence: CTTAATCT-(3)-TTTTACTG-(3)-TTTAACCC Locus tag: cce_1163
	cce_1163	-109	9.7	CTTAATCT-(3)-TTTTACTG-(3)-TTTAACCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: pstS
Ortholog function: Phosphate ABC transporter, substrate-binding protein
Cyanothece sp. ATCC 51142	cce_1163	-109	9.7	CTTAATCT-(3)-TTTTACTG-(3)-TTTAACCC
Cyanothece sp. PCC 8801	PCC8801_1024	-108	9.8	TTTTATCA-(3)-GTTTACCT-(3)-CTTAACCC
Thermosynechococcus elongatus BP-1	tlr2164	-51	10.9	TTTAAACA-(3)-TTTTACCT-(3)-CTTAACTT

Position: -143 Score: 7.7 Sequence: TATAATCT-(3)-GTTTTATT-(3)-GTCTATTT Locus tag: cce_1211
	cce_1211	-143	7.7	TATAATCT-(3)-GTTTTATT-(3)-GTCTATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: purF
Ortholog function: Amidophosphoribosyltransferase (EC 2.4.2.14)
Cyanothece sp. ATCC 51142	cce_1211	-143	7.7	TATAATCT-(3)-GTTTTATT-(3)-GTCTATTT
Cyanothece sp. PCC 8801	PCC8801_4178	-104	7.5	GATAAGAT-(3)-GTTAAAGA-(3)-GTTAAAAT
Nostoc sp. PCC 7120	all3651	-119	7.7	TTTAATAT-(3)-GTTAAAGA-(3)-GTTAAGAC
Trichodesmium erythraeum IMS101	Tery_3699	-97	8.3	GTTAAGGA-(3)-CTTAAAGT-(3)-TTTAAGCT
Synechococcus elongatus PCC 7942	Synpcc7942_0004	-76	7.8	GTTAAGTC-(3)-GTTAAATT-(3)-ATTAGCCG

Position: -141 Score: 8.8 Sequence: CTTAATAA-(3)-GTTTAACT-(3)-CTTCATAT Locus tag: cce_1859
	cce_1859	-141	8.8	CTTAATAA-(3)-GTTTAACT-(3)-CTTCATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sphX
Ortholog function: Phosphate ABC transport system, substrate-binding protein
Synechocystis sp. PCC 6803	sll0679	-135	10.9	TTTAACCA-(3)-CTTTACTA-(3)-CTTAACCT
Cyanothece sp. ATCC 51142	cce_1859	-141	8.8	CTTAATAA-(3)-GTTTAACT-(3)-CTTCATAT
Cyanothece sp. PCC 8801	PCC8801_4067	-157	8.1	CTTAGCAT-(3)-CTTTTTCT-(3)-GCTAAACT

Position: -44 Score: 8.4 Sequence: CTTATCTA-(3)-CTTTATTT-(3)-TTTATACT Locus tag: cce_3317
	cce_3317	-44	8.4	CTTATCTA-(3)-CTTTATTT-(3)-TTTATACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SYNPCC7002_A1357
Ortholog function: Conserved hypothetical protein
Synechococcus sp. PCC 7002	SYNPCC7002_A1357	-125	7.8	GCTAACCT-(3)-CTATATTT-(3)-TTTTATTT
Cyanothece sp. ATCC 51142	cce_3317	-44	8.4	CTTATCTA-(3)-CTTTATTT-(3)-TTTATACT
Cyanothece sp. PCC 8801	PCC8801_1847	-43	7.5	AATAAATT-(3)-TCTTATTT-(3)-ATTATCTT
Trichodesmium erythraeum IMS101	Tery_4322	-395	7	CTTATTAT-(3)-AATTATTT-(3)-ATTTAGCT
Thermosynechococcus elongatus BP-1	null	-268	7.1	ATTAAAAA-(3)-ATTAAAAA-(3)-TTTCTCTT

Position: -283 Score: 8 Sequence: CTTATAAA-(3)-CTTAACCT-(3)-AATAATTT Position: -226 Score: 8.4 Sequence: CTTTACCA-(3)-TTTAACCC-(3)-TATTATTT Position: -215 Score: 9.5 Sequence: TTTAACCC-(3)-TATTATTT-(3)-TTTAATCA Locus tag: cce_3495
	cce_3495	-283	8	CTTATAAA-(3)-CTTAACCT-(3)-AATAATTT
		-226	8.4	CTTTACCA-(3)-TTTAACCC-(3)-TATTATTT
		-215	9.5	TTTAACCC-(3)-TATTATTT-(3)-TTTAATCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: phoD
Ortholog function: Phosphodiesterase/alkaline phosphatase D
Nostoc sp. PCC 7120	all0207	-98	9.3	ATTAACCC-(3)-GATAACTC-(3)-CTTTACTT
Synechococcus sp. JA-3-3Ab	CYA_2506	-129	7.9	CTTAAACA-(3)-GCTAACCC-(3)-TTTCACCG

Position: -88 Score: 8.7 Sequence: TTTAAAGT-(3)-TTTAACAT-(3)-CTTTAAAT Locus tag: cce_4621
	cce_4621	-88	8.7	TTTAAAGT-(3)-TTTAACAT-(3)-CTTTAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: phoA
Ortholog function: Alkaline phosphatase
Synechocystis sp. PCC 6803	sll0654	-210	7.3	TTTTACTT-(3)-CTTTCCCT-(3)-GTTAGCAA
		-175	8.8	CTTAACCT-(3)-CATAGTCT-(3)-CATAAGTT
Cyanothece sp. ATCC 51142	cce_4621	-88	8.7	TTTAAAGT-(3)-TTTAACAT-(3)-CTTTAAAT
Synechococcus elongatus PCC 7942	Synpcc7942_1392	-233	9.4	TTTAACTA-(3)-CATAATCT-(3)-CTCAATCT

Position: -131 Score: 7.7 Sequence: TTAAACAT-(3)-CCTAACCT-(3)-ATTCATCT Position: -125 Score: 8.3 Sequence: ATTAACCT-(3)-CTGAAATT-(3)-CTAAAGTT Locus tag: cce_4758
	cce_4758	-131	7.7	TTAAACAT-(3)-CCTAACCT-(3)-ATTCATCT
		-125	8.3	ATTAACCT-(3)-CTGAAATT-(3)-CTAAAGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fbp
Ortholog function: Fructose 1,6-bisphosphatase I (EC 3.1.3.11)
Cyanothece sp. ATCC 51142	cce_4758	-125	8.3	ATTAACCT-(3)-CTGAAATT-(3)-CTAAAGTT
Cyanothece sp. PCC 8801	PCC8801_0430	-278	7.9	TTAAAATT-(3)-TTTTATTT-(3)-CTTTTATT
Microcystis aeruginosa NIES-843	MAE_23860	-129	7.6	ATTAGCCA-(3)-CTAAAACT-(3)-CTAAAAAT
Nostoc sp. PCC 7120	all4021	-136	7	CGTAAACT-(3)-GATTTCTT-(3)-TTTATCTA
Trichodesmium erythraeum IMS101	Tery_0682	-336	6.5	TTTTAGAT-(3)-GTTTTTGT-(3)-CATTATCA

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of SphR regulog to Cyanothece sp. ATCC 51142

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --