Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Fur regulog to Synechococcus sp. CC9311

Reference regulog properties
Source regulog: Fur - Cyanobacteria
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Phylum: Cyanobacteria
Propagated regulon:
Target genome Synechococcus sp. CC9311
Orthologous TF(s) sync_1167
Regulated genes 4
Built upon 167 sites [see more]
Predicted regulatory interactions in Synechococcus sp. CC9311
Locus tag Position Score Sequence
Position: -310
Score: 3.3
Sequence: GTTGATAGTTTTTTGTCTT
Locus tag: sync_0393
sync_0393 -310 3.3 GTTGATAGTTTTTTGTCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: psaA
Ortholog function: Photosystem I P700 chlorophyll A apoprotein A1
Synechococcus sp. PCC 7002 SYNPCC7002_A1961 -206 3.4 AGTTTTAAATATTGTTAAT
Cyanothece sp. ATCC 51142 cce_0989 -205 3.4 AATTTTAATTATTGTTAAG
Microcystis aeruginosa NIES-843 MAE_47560 -297 3.2 ATTAATAAACTTTTGTAAA
Nostoc sp. PCC 7120 alr5154 -177 3.4 ATTTTGAATTATTGTTAAA
Trichodesmium erythraeum IMS101 Tery_4669 -80 4 ATTGATAATTCTTTACAAC
Synechococcus elongatus PCC 7942 Synpcc7942_2049 -296 3.3 TCTTTGAATTATTGTTAAT
Gloeobacter violaceus PCC 7421 gvip470 -195 2.2 TTTTTAAAAATTGTTAAGT
Position: -29
Score: 2.9
Sequence: ACTGTTCATCTCTCTCAAC
Locus tag: sync_0681
sync_0681 -29 2.9 ACTGTTCATCTCTCTCAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: feoB
Ortholog function: Ferrous iron transport protein B
Synechocystis sp. PCC 6803 slr1392 -278 4.5 GTTGAGAATTATTTGCAGT
Cyanothece sp. ATCC 51142 cce_0032 -298 3.3 ATTAAAAAATACTGTTAAC
-47 4.5 GATAAGAATTATTCTTAAT
Trichodesmium erythraeum IMS101 Tery_2878 -43 3 TATTACATAATTTTTATAT
Position: -214
Score: 3.4
Sequence: CCTGATATCAAAGGTCATT
Locus tag: sync_0897
sync_0897 -214 3.4 CCTGATATCAAAGGTCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: psbD
Ortholog function: Photosystem II, reaction center protein
Synechocystis sp. PCC 6803 sll0849 -298 3.3 AATGTAAAATATTTGCTAA
Cyanothece sp. ATCC 51142 cce_0660 -298 3.4 ATTGTAAATTTTTTGCTAA
Cyanothece sp. PCC 7425 Cyan7425_5031 -91 3.1 GTTTATAAACTTTCGTAAA
Microcystis aeruginosa NIES-843 MAE_41160 -274 2.9 ATTTGTAATTTTTTGCTAA
Synechococcus sp. JA-3-3Ab CYA_2647 -106 3 TTTATTAATTTTTCGTAAG
Position: -33
Score: 3.2
Sequence: AATGAAAACAACACCCACG
Position: -1
Score: 3.1
Sequence: CATGACCACAACTCTCACC
Locus tag: sync_1975
sync_1975 -33 3.2 AATGAAAACAACACCCACG
-1 3.1 CATGACCACAACTCTCACC
Supported by regulated orthologs from reference regulons
Ortholog gene name: chlL
Ortholog function: Light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein
Synechococcus sp. PCC 7002 SYNPCC7002_A2347 -126 3.6 TTTTATAAAAACTCTAAGT
Synechocystis sp. PCC 6803 slr0749 -173 3.3 ATTTTATTTTTGTCTCAAT
Cyanothece sp. PCC 8801 PCC8801_0791 -242 2.7 ATTTAGTAAATTTTAAAGT
Microcystis aeruginosa NIES-843 MAE_16230 -150 2.8 ATTTATATAATTTTTAAGC
Thermosynechococcus elongatus BP-1 null -211 2.8 TTTTGTATTTTTGTTTAAT