Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of SphR regulog to Synechococcus elongatus PCC 7942

Reference regulog properties
Source regulog: SphR - Cyanobacteria
Regulator type: Transcription factor
Regulator family: OmpR
Regulation mode: repressor (activator)
Biological process: Phosphate metabolism
Effector: Inorganic phosphate
Phylum: Cyanobacteria
Propagated regulon:
Target genome Synechococcus elongatus PCC 7942
Orthologous TF(s) Synpcc7942_1012
Regulated genes 2
Built upon 77 sites [see more]
Predicted regulatory interactions in Synechococcus elongatus PCC 7942
Locus tag Position Score Sequence
Position: -76
Score: 7.8
Sequence: GTTAAGTC-(3)-GTTAAATT-(3)-ATTAGCCG
Locus tag: Synpcc7942_0004
Synpcc7942_0004 -76 7.8 GTTAAGTC-(3)-GTTAAATT-(3)-ATTAGCCG
Supported by regulated orthologs from reference regulons
Ortholog gene name: purF
Ortholog function: Amidophosphoribosyltransferase (EC 2.4.2.14)
Cyanothece sp. ATCC 51142 cce_1211 -143 7.7 TATAATCT-(3)-GTTTTATT-(3)-GTCTATTT
Cyanothece sp. PCC 8801 PCC8801_4178 -104 7.5 GATAAGAT-(3)-GTTAAAGA-(3)-GTTAAAAT
Nostoc sp. PCC 7120 all3651 -119 7.7 TTTAATAT-(3)-GTTAAAGA-(3)-GTTAAGAC
Trichodesmium erythraeum IMS101 Tery_3699 -97 8.3 GTTAAGGA-(3)-CTTAAAGT-(3)-TTTAAGCT
Synechococcus elongatus PCC 7942 Synpcc7942_0004 -76 7.8 GTTAAGTC-(3)-GTTAAATT-(3)-ATTAGCCG
Position: -233
Score: 9.4
Sequence: TTTAACTA-(3)-CATAATCT-(3)-CTCAATCT
Locus tag: Synpcc7942_1392
Synpcc7942_1392 -233 9.4 TTTAACTA-(3)-CATAATCT-(3)-CTCAATCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: phoA
Ortholog function: Alkaline phosphatase
Synechocystis sp. PCC 6803 sll0654 -210 7.3 TTTTACTT-(3)-CTTTCCCT-(3)-GTTAGCAA
-175 8.8 CTTAACCT-(3)-CATAGTCT-(3)-CATAAGTT
Cyanothece sp. ATCC 51142 cce_4621 -88 8.7 TTTAAAGT-(3)-TTTAACAT-(3)-CTTTAAAT
Synechococcus elongatus PCC 7942 Synpcc7942_1392 -233 9.4 TTTAACTA-(3)-CATAATCT-(3)-CTCAATCT