Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of SphR regulog to Nodularia spumigena CCY9414

Reference regulog properties
Source regulog: SphR - Cyanobacteria
Regulator type: Transcription factor
Regulator family: OmpR
Regulation mode: repressor (activator)
Biological process: Phosphate metabolism
Effector: Inorganic phosphate
Phylum: Cyanobacteria
Propagated regulon:
Target genome Nodularia spumigena CCY9414
Orthologous TF(s) N9414_10198
Regulated genes 7
Built upon 77 sites [see more]
Predicted regulatory interactions in Nodularia spumigena CCY9414
Locus tag Position Score Sequence
Position: -46
Score: 7.4
Sequence: TTTACTCT-(3)-ATTTTTTT-(3)-ATTTAATT
Locus tag: N9414_24158
N9414_24158 -46 7.4 TTTACTCT-(3)-ATTTTTTT-(3)-ATTTAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: pstC
Ortholog function: Phosphate ABC transporter, transmembrane protein 1
Cyanothece sp. ATCC 51142 cce_0885 -358 6.9 CTTGAAAA-(3)-TATAAATA-(3)-GTTATCAT
-53 7.5 GTTAGATT-(3)-CTTTAAGA-(3)-GTTTAGTT
Microcystis aeruginosa NIES-843 MAE_18370 -87 9.5 TTTATTCA-(3)-CTTAACCT-(3)-CTTTACCA
Nostoc sp. PCC 7120 all4574 -324 8 TTTTATCT-(3)-CTTTTATT-(3)-CTTTTTTT
Synechococcus sp. JA-3-3Ab CYA_1733 -75 9.6 GTTAACCT-(3)-GATATCCT-(3)-GTTAACTT
Position: -240
Score: 8.6
Sequence: AATAACCT-(3)-GATAACTC-(3)-CTTTACTC
Locus tag: N9414_18243
N9414_18243 -240 8.6 AATAACCT-(3)-GATAACTC-(3)-CTTTACTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: phoD
Ortholog function: Phosphodiesterase/alkaline phosphatase D
Nostoc sp. PCC 7120 all0207 -98 9.3 ATTAACCC-(3)-GATAACTC-(3)-CTTTACTT
Synechococcus sp. JA-3-3Ab CYA_2506 -129 7.9 CTTAAACA-(3)-GCTAACCC-(3)-TTTCACCG
Position: -114
Score: 7.2
Sequence: TTTAGCTT-(3)-ATTTATGC-(3)-ATTTAAAT
Position: -102
Score: 7.3
Sequence: TTTATGCT-(3)-TTTAAATG-(3)-TTTATAAT
Locus tag: N9414_03001
N9414_03001 -114 7.2 TTTAGCTT-(3)-ATTTATGC-(3)-ATTTAAAT
-102 7.3 TTTATGCT-(3)-TTTAAATG-(3)-TTTATAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: rpaA
Ortholog function: Transcription regulator, OmpR family
Synechocystis sp. PCC 6803 slr0115 -174 7 ATTACCCA-(3)-TTTAGATG-(3)-TTTTTCTT
Nostoc sp. PCC 7120 all0129 -101 7.3 TTTATGTT-(3)-TTTAAAAT-(3)-TTTTATAA
Trichodesmium erythraeum IMS101 Tery_4937 -158 7 CTTGACAA-(3)-AATAAATT-(3)-GTTAAAGA