Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Fur regulog to Prochlorococcus marinus str. MIT 9211

Reference regulog properties
Source regulog: Fur - Cyanobacteria
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Phylum: Cyanobacteria
Propagated regulon:
Target genome Prochlorococcus marinus str. MIT 9211
Orthologous TF(s) null
Regulated genes 5
Built upon 167 sites [see more]
Predicted regulatory interactions in Prochlorococcus marinus str. MIT 9211
Locus tag Position Score Sequence
Position: -151
Score: 3.5
Sequence: ATTTAGACTTATCTTTATT
Position: -148
Score: 3
Sequence: TAGACTTATCTTTATTATT
Position: -142
Score: 3.7
Sequence: TATCTTTATTATTCTCTTT
Position: -81
Score: 3
Sequence: ATCGAATTACTCAAACATT
Position: -41
Score: 2.9
Sequence: CTTGAATATAGATATATAA
Position: -13
Score: 3.1
Sequence: GAAGAGAAAATTAATGACT
Locus tag: null
null -151 3.5 ATTTAGACTTATCTTTATT
-148 3 TAGACTTATCTTTATTATT
-142 3.7 TATCTTTATTATTCTCTTT
-81 3 ATCGAATTACTCAAACATT
-41 2.9 CTTGAATATAGATATATAA
-13 3.1 GAAGAGAAAATTAATGACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: chlL
Ortholog function: Light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein
Synechococcus sp. PCC 7002 SYNPCC7002_A2347 -126 3.6 TTTTATAAAAACTCTAAGT
Synechocystis sp. PCC 6803 slr0749 -173 3.3 ATTTTATTTTTGTCTCAAT
Cyanothece sp. PCC 8801 PCC8801_0791 -242 2.7 ATTTAGTAAATTTTAAAGT
Microcystis aeruginosa NIES-843 MAE_16230 -150 2.8 ATTTATATAATTTTTAAGC
Thermosynechococcus elongatus BP-1 null -211 2.8 TTTTGTATTTTTGTTTAAT
Position: -162
Score: 3
Sequence: ATCGAAATACGGTATGAAA
Position: -150
Score: 3.8
Sequence: TATGAAATTAATTCAGAGT
Position: -109
Score: 3
Sequence: AATGCTAAGAAAATGCAAC
Position: -93
Score: 3.3
Sequence: AACAAAACATATATTCAAT
Position: -76
Score: 3.2
Sequence: ATCCCGAATTTTTTGCTTT
Position: -69
Score: 3
Sequence: ATTTTTTGCTTTTCTAATT
Position: -53
Score: 3.6
Sequence: ATTGCATCTTTCTATTAAT
Locus tag: null
null -162 3 ATCGAAATACGGTATGAAA
-150 3.8 TATGAAATTAATTCAGAGT
-109 3 AATGCTAAGAAAATGCAAC
-93 3.3 AACAAAACATATATTCAAT
-76 3.2 ATCCCGAATTTTTTGCTTT
-69 3 ATTTTTTGCTTTTCTAATT
-53 3.6 ATTGCATCTTTCTATTAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: chlN
Ortholog function: Light-independent protochlorophyllide reductase, subunit N
Synechococcus sp. PCC 7002 SYNPCC7002_A2345 -126 3.6 TTTTATAAAAACTCTAAGT
Cyanothece sp. ATCC 51142 cce_4534 -118 3.7 TTTGAGTTTTATTTAAAAT
Cyanothece sp. PCC 8801 PCC8801_0789 -242 2.7 ATTTAGTAAATTTTAAAGT
Microcystis aeruginosa NIES-843 MAE_16250 -107 2.8 ATTAAGTAATTCTTTATAT
Thermosynechococcus elongatus BP-1 null -211 2.8 TTTTGTATTTTTGTTTAAT
Position: -177
Score: 3.2
Sequence: TATCAGACCAGTACTGAAT
Position: -165
Score: 3.5
Sequence: ACTGAATACTATTGTCTAA
Position: -134
Score: 3.2
Sequence: ATTGGCCACAAAAACCATT
Position: -116
Score: 3.5
Sequence: TTTTTGGACGATTAGCAAT
Locus tag: null
null -177 3.2 TATCAGACCAGTACTGAAT
-165 3.5 ACTGAATACTATTGTCTAA
-134 3.2 ATTGGCCACAAAAACCATT
-116 3.5 TTTTTGGACGATTAGCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: psbD
Ortholog function: Photosystem II, reaction center protein
Synechocystis sp. PCC 6803 sll0849 -298 3.3 AATGTAAAATATTTGCTAA
Cyanothece sp. ATCC 51142 cce_0660 -298 3.4 ATTGTAAATTTTTTGCTAA
Cyanothece sp. PCC 7425 Cyan7425_5031 -91 3.1 GTTTATAAACTTTCGTAAA
Microcystis aeruginosa NIES-843 MAE_41160 -274 2.9 ATTTGTAATTTTTTGCTAA
Synechococcus sp. JA-3-3Ab CYA_2647 -106 3 TTTATTAATTTTTCGTAAG
Position: 20
Score: 2.9
Sequence: TCTTCTAAAAGCTCCCAAT
Locus tag: null
null 20 2.9 TCTTCTAAAAGCTCCCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: psbC
Ortholog function: photosystem II, chlorophyll-binding protein
Synechocystis sp. PCC 6803 sll0851 -298 3.3 AATGTAAAATATTTGCTAA
Cyanothece sp. ATCC 51142 cce_0659 -298 3.4 ATTGTAAATTTTTTGCTAA
Microcystis aeruginosa NIES-843 MAE_41150 -274 2.9 ATTTGTAATTTTTTGCTAA
Trichodesmium erythraeum IMS101 Tery_0513 -195 3.5 TTTACAAAAAATTTGTAAT
Position: -316
Score: 3.2
Sequence: GAAGATTAATTTTCTTTAT
Position: -312
Score: 3.1
Sequence: ATTAATTTTCTTTATTTCT
Position: -290
Score: 3.5
Sequence: TTTGAGCCTGGTAAACAAT
Position: -219
Score: 2.9
Sequence: AATAGAAAAAGCTTTCAAG
Position: -78
Score: 3.1
Sequence: TATGGAATTTATTCCTATA
Locus tag: null
null -316 3.2 GAAGATTAATTTTCTTTAT
-312 3.1 ATTAATTTTCTTTATTTCT
-290 3.5 TTTGAGCCTGGTAAACAAT
-219 2.9 AATAGAAAAAGCTTTCAAG
-78 3.1 TATGGAATTTATTCCTATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: psaA
Ortholog function: Photosystem I P700 chlorophyll A apoprotein A1
Synechococcus sp. PCC 7002 SYNPCC7002_A1961 -206 3.4 AGTTTTAAATATTGTTAAT
Cyanothece sp. ATCC 51142 cce_0989 -205 3.4 AATTTTAATTATTGTTAAG
Microcystis aeruginosa NIES-843 MAE_47560 -297 3.2 ATTAATAAACTTTTGTAAA
Nostoc sp. PCC 7120 alr5154 -177 3.4 ATTTTGAATTATTGTTAAA
Trichodesmium erythraeum IMS101 Tery_4669 -80 4 ATTGATAATTCTTTACAAC
Synechococcus elongatus PCC 7942 Synpcc7942_2049 -296 3.3 TCTTTGAATTATTGTTAAT
Gloeobacter violaceus PCC 7421 gvip470 -195 2.2 TTTTTAAAAATTGTTAAGT