Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Fur regulog to Synechococcus sp. WH 5701

Reference regulog properties
Source regulog: Fur - Cyanobacteria
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Phylum: Cyanobacteria
Propagated regulon:
Target genome Synechococcus sp. WH 5701
Orthologous TF(s) WH5701_12154
Regulated genes 3
Built upon 167 sites [see more]
Predicted regulatory interactions in Synechococcus sp. WH 5701
Locus tag Position Score Sequence
Position: -65
Score: 3.5
Sequence: CATGAACATTGTTACCATC
Locus tag: WH5701_14416
WH5701_14416 -65 3.5 CATGAACATTGTTACCATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: psbD
Ortholog function: Photosystem II, reaction center protein
Synechocystis sp. PCC 6803 sll0849 -298 3.3 AATGTAAAATATTTGCTAA
Cyanothece sp. ATCC 51142 cce_0660 -298 3.4 ATTGTAAATTTTTTGCTAA
Cyanothece sp. PCC 7425 Cyan7425_5031 -91 3.1 GTTTATAAACTTTCGTAAA
Microcystis aeruginosa NIES-843 MAE_41160 -274 2.9 ATTTGTAATTTTTTGCTAA
Synechococcus sp. JA-3-3Ab CYA_2647 -106 3 TTTATTAATTTTTCGTAAG
Position: -168
Score: 4.2
Sequence: CATGAGAGTGATTGTCAAG
Locus tag: WH5701_11369
WH5701_11369 -168 4.2 CATGAGAGTGATTGTCAAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: chlL
Ortholog function: Light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein
Synechococcus sp. PCC 7002 SYNPCC7002_A2347 -126 3.6 TTTTATAAAAACTCTAAGT
Synechocystis sp. PCC 6803 slr0749 -173 3.3 ATTTTATTTTTGTCTCAAT
Cyanothece sp. PCC 8801 PCC8801_0791 -242 2.7 ATTTAGTAAATTTTAAAGT
Microcystis aeruginosa NIES-843 MAE_16230 -150 2.8 ATTTATATAATTTTTAAGC
Thermosynechococcus elongatus BP-1 null -211 2.8 TTTTGTATTTTTGTTTAAT
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