Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of SphR regulog to Prochlorococcus marinus sp. MED4

Reference regulog properties
Source regulog: SphR - Cyanobacteria
Regulator type: Transcription factor
Regulator family: OmpR
Regulation mode: repressor (activator)
Biological process: Phosphate metabolism
Effector: Inorganic phosphate
Phylum: Cyanobacteria
Propagated regulon:
Target genome Prochlorococcus marinus sp. MED4
Orthologous TF(s) PMM0705
Regulated genes 3
Built upon 77 sites [see more]
Predicted regulatory interactions in Prochlorococcus marinus sp. MED4
Locus tag Position Score Sequence
Position: -239
Score: 7.3
Sequence: ATTTAACT-(3)-GTTATTTG-(3)-ATTTATAT
Locus tag: PMM0128
PMM0128 -239 7.3 ATTTAACT-(3)-GTTATTTG-(3)-ATTTATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: rpaA
Ortholog function: Transcription regulator, OmpR family
Synechocystis sp. PCC 6803 slr0115 -174 7 ATTACCCA-(3)-TTTAGATG-(3)-TTTTTCTT
Nostoc sp. PCC 7120 all0129 -101 7.3 TTTATGTT-(3)-TTTAAAAT-(3)-TTTTATAA
Trichodesmium erythraeum IMS101 Tery_4937 -158 7 CTTGACAA-(3)-AATAAATT-(3)-GTTAAAGA
Position: -69
Score: 9
Sequence: CTTAATAA-(3)-TATTTTTT-(3)-CTTAACTT
Locus tag: PMM0708
PMM0708 -69 9 CTTAATAA-(3)-TATTTTTT-(3)-CTTAACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: phoA1
Ortholog function: Alkaline phosphatase
Synechococcus sp. PCC 7002 SYNPCC7002_A2352 -182 7.5 ATTTAATT-(3)-TTTAGTTG-(3)-CTTAGCTA
-91 9.5 ATTAAACT-(3)-CTTAGTTT-(3)-TTTAACTC
Cyanothece sp. PCC 7425 Cyan7425_4261 -146 9 ATTAATCA-(3)-GTTTACCT-(3)-CATAAATC
Position: -76
Score: 8
Sequence: TTTATATA-(3)-CTTTAACC-(3)-CTTAAAGT
Locus tag: PMM0723
PMM0723 -76 8 TTTATATA-(3)-CTTTAACC-(3)-CTTAAAGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: pstC
Ortholog function: Phosphate ABC transporter, transmembrane protein 1
Cyanothece sp. ATCC 51142 cce_0885 -358 6.9 CTTGAAAA-(3)-TATAAATA-(3)-GTTATCAT
-53 7.5 GTTAGATT-(3)-CTTTAAGA-(3)-GTTTAGTT
Microcystis aeruginosa NIES-843 MAE_18370 -87 9.5 TTTATTCA-(3)-CTTAACCT-(3)-CTTTACCA
Nostoc sp. PCC 7120 all4574 -324 8 TTTTATCT-(3)-CTTTTATT-(3)-CTTTTTTT
Synechococcus sp. JA-3-3Ab CYA_1733 -75 9.6 GTTAACCT-(3)-GATATCCT-(3)-GTTAACTT
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