Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of SphR regulog to Prochlorococcus marinus str. MIT 9301

Reference regulog properties
Source regulog: SphR - Cyanobacteria
Regulator type: Transcription factor
Regulator family: OmpR
Regulation mode: repressor (activator)
Biological process: Phosphate metabolism
Effector: Inorganic phosphate
Phylum: Cyanobacteria
Propagated regulon:
Target genome Prochlorococcus marinus str. MIT 9301
Orthologous TF(s) null
Regulated genes 2
Built upon 77 sites [see more]
Predicted regulatory interactions in Prochlorococcus marinus str. MIT 9301
Locus tag Position Score Sequence
Position: -65
Score: 7.4
Sequence: ATTTAATT-(3)-TTTTTCTA-(3)-ATTAAAAT
Locus tag: null
null -65 7.4 ATTTAATT-(3)-TTTTTCTA-(3)-ATTAAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: rsbU
Ortholog function: Protein serine/threonine phosphatase
Cyanothece sp. PCC 8801 PCC8801_3662 -162 7.4 ATTAACGC-(3)-GATTAACC-(3)-CCTAATTA
Nostoc sp. PCC 7120 all1758 -49 7.5 ATTTATTA-(3)-GTCAATCT-(3)-ATTAACCC
Trichodesmium erythraeum IMS101 Tery_0739 -250 8.3 TTAAAACT-(3)-CTTAATCT-(3)-ACTAACTC
Position: -156
Score: 7.9
Sequence: TTTTAAAA-(3)-TGTAATTT-(3)-CTTAATCC
Locus tag: null
null -156 7.9 TTTTAAAA-(3)-TGTAATTT-(3)-CTTAATCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: rpaA
Ortholog function: Transcription regulator, OmpR family
Synechocystis sp. PCC 6803 slr0115 -174 7 ATTACCCA-(3)-TTTAGATG-(3)-TTTTTCTT
Nostoc sp. PCC 7120 all0129 -101 7.3 TTTATGTT-(3)-TTTAAAAT-(3)-TTTTATAA
Trichodesmium erythraeum IMS101 Tery_4937 -158 7 CTTGACAA-(3)-AATAAATT-(3)-GTTAAAGA