Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of SphR regulog to Cyanothece sp. CCY 0110

Reference regulog properties
Source regulog: SphR - Cyanobacteria
Regulator type: Transcription factor
Regulator family: OmpR
Regulation mode: repressor (activator)
Biological process: Phosphate metabolism
Effector: Inorganic phosphate
Phylum: Cyanobacteria
Propagated regulon:
Target genome Cyanothece sp. CCY 0110
Orthologous TF(s) CY0110_27685
Regulated genes 8
Built upon 77 sites [see more]
Predicted regulatory interactions in Cyanothece sp. CCY 0110
Locus tag Position Score Sequence
Position: -227
Score: 7.6
Sequence: TTTAATTT-(3)-TATTTTCT-(3)-AGTAACTT
Position: -144
Score: 7.5
Sequence: CTAAATAT-(3)-CCTAACCT-(3)-ATTCATCT
Position: -138
Score: 8.3
Sequence: ATTAACCT-(3)-CTGAAATT-(3)-CTAAAGTT
Locus tag: CY0110_03914
CY0110_03914 -227 7.6 TTTAATTT-(3)-TATTTTCT-(3)-AGTAACTT
-144 7.5 CTAAATAT-(3)-CCTAACCT-(3)-ATTCATCT
-138 8.3 ATTAACCT-(3)-CTGAAATT-(3)-CTAAAGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fbp
Ortholog function: Fructose 1,6-bisphosphatase I (EC 3.1.3.11)
Cyanothece sp. ATCC 51142 cce_4758 -125 8.3 ATTAACCT-(3)-CTGAAATT-(3)-CTAAAGTT
Cyanothece sp. PCC 8801 PCC8801_0430 -278 7.9 TTAAAATT-(3)-TTTTATTT-(3)-CTTTTATT
Microcystis aeruginosa NIES-843 MAE_23860 -129 7.6 ATTAGCCA-(3)-CTAAAACT-(3)-CTAAAAAT
Nostoc sp. PCC 7120 all4021 -136 7 CGTAAACT-(3)-GATTTCTT-(3)-TTTATCTA
Trichodesmium erythraeum IMS101 Tery_0682 -336 6.5 TTTTAGAT-(3)-GTTTTTGT-(3)-CATTATCA
Position: -347
Score: 8.7
Sequence: ATTTATTT-(3)-CTTAAATT-(3)-CTTATATT
Position: -336
Score: 10.1
Sequence: CTTAAATT-(3)-CTTATATT-(3)-CTTAACCT
Position: -238
Score: 9
Sequence: TTAAATTA-(3)-CTTAACTT-(3)-TTTAACCC
Position: -227
Score: 8.8
Sequence: CTTAACTT-(3)-TTTAACCC-(3)-TATTATTT
Position: -216
Score: 9.5
Sequence: TTTAACCC-(3)-TATTATTT-(3)-TTTAATCA
Locus tag: CY0110_04418
CY0110_04418 -347 8.7 ATTTATTT-(3)-CTTAAATT-(3)-CTTATATT
-336 10.1 CTTAAATT-(3)-CTTATATT-(3)-CTTAACCT
-238 9 TTAAATTA-(3)-CTTAACTT-(3)-TTTAACCC
-227 8.8 CTTAACTT-(3)-TTTAACCC-(3)-TATTATTT
-216 9.5 TTTAACCC-(3)-TATTATTT-(3)-TTTAATCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: phoD
Ortholog function: Phosphodiesterase/alkaline phosphatase D
Nostoc sp. PCC 7120 all0207 -98 9.3 ATTAACCC-(3)-GATAACTC-(3)-CTTTACTT
Synechococcus sp. JA-3-3Ab CYA_2506 -129 7.9 CTTAAACA-(3)-GCTAACCC-(3)-TTTCACCG
Position: -90
Score: 9.3
Sequence: TTTAATCT-(3)-GATTACCC-(3)-GTTTACCT
Locus tag: CY0110_11197
CY0110_11197 -90 9.3 TTTAATCT-(3)-GATTACCC-(3)-GTTTACCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cysR
Ortholog function: Transcription regulator, Fnr-Crp family
Synechococcus sp. PCC 7002 SYNPCC7002_A1232 -126 8.7 CTTAAACT-(3)-GATTACAT-(3)-ATTTAACT
Cyanothece sp. PCC 8801 PCC8801_0346 -91 9.7 TTTAATCT-(3)-GATTACCT-(3)-GTTTACCT
Microcystis aeruginosa NIES-843 MAE_18440 -86 9.6 GTTAATCT-(3)-GATTACCT-(3)-GTTTACCT
Position: -109
Score: 9.8
Sequence: GTTAATCT-(3)-TTTTACTA-(3)-TTTAACCC
Locus tag: CY0110_12287
CY0110_12287 -109 9.8 GTTAATCT-(3)-TTTTACTA-(3)-TTTAACCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: pstS
Ortholog function: Phosphate ABC transporter, substrate-binding protein
Cyanothece sp. ATCC 51142 cce_1163 -109 9.7 CTTAATCT-(3)-TTTTACTG-(3)-TTTAACCC
Cyanothece sp. PCC 8801 PCC8801_1024 -108 9.8 TTTTATCA-(3)-GTTTACCT-(3)-CTTAACCC
Thermosynechococcus elongatus BP-1 tlr2164 -51 10.9 TTTAAACA-(3)-TTTTACCT-(3)-CTTAACTT
Position: -219
Score: 8.8
Sequence: CTTTAACC-(3)-CTCAATCT-(3)-CTTAAACT
Locus tag: CY0110_08906
CY0110_08906 -219 8.8 CTTTAACC-(3)-CTCAATCT-(3)-CTTAAACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: spoT
Ortholog function: Guanosine-3',5'-bis(diphosphate) 3'-diphosphatase (EC 3.1.7.2)
Cyanothece sp. ATCC 51142 cce_4391 20 8.8 CTTTAACC-(3)-CTCAATCT-(3)-CTTAAACT
Cyanothece sp. PCC 8801 PCC8801_1433 -224 8.5 TTTAACAG-(3)-CTAAACCT-(3)-TTTAAACT
Trichodesmium erythraeum IMS101 Tery_2653 -43 7.8 AATAAACT-(3)-ATTTGATA-(3)-ATTAACTC
Position: -257
Score: 7.7
Sequence: AATAACAT-(3)-CTTAGCCA-(3)-TTTATTTA
Position: -90
Score: 8.7
Sequence: TTTATAAT-(3)-CTTAACCT-(3)-GTTTACCA
Position: -54
Score: 7.5
Sequence: GTTAGATT-(3)-CTTTAAGA-(3)-GTTTAGTT
Locus tag: CY0110_02657
CY0110_02657 -257 7.7 AATAACAT-(3)-CTTAGCCA-(3)-TTTATTTA
-90 8.7 TTTATAAT-(3)-CTTAACCT-(3)-GTTTACCA
-54 7.5 GTTAGATT-(3)-CTTTAAGA-(3)-GTTTAGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: pstS
Ortholog function: Phosphate ABC transporter, substrate-binding protein
Cyanothece sp. ATCC 51142 cce_0886 -358 6.9 CTTGAAAA-(3)-TATAAATA-(3)-GTTATCAT
-53 7.5 GTTAGATT-(3)-CTTTAAGA-(3)-GTTTAGTT
Microcystis aeruginosa NIES-843 MAE_18380 -87 9.5 TTTATTCA-(3)-CTTAACCT-(3)-CTTTACCA
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