Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of SphR regulog to Cyanothece sp. PCC 8802

Reference regulog properties
Source regulog: SphR - Cyanobacteria
Regulator type: Transcription factor
Regulator family: OmpR
Regulation mode: repressor (activator)
Biological process: Phosphate metabolism
Effector: Inorganic phosphate
Phylum: Cyanobacteria
Propagated regulon:
Target genome Cyanothece sp. PCC 8802
Orthologous TF(s) Cyan8802_2657
Regulated genes 11
Built upon 77 sites [see more]
Predicted regulatory interactions in Cyanothece sp. PCC 8802
Locus tag Position Score Sequence
Position: -91
Score: 9.7
Sequence: TTTAATCT-(3)-GATTACCT-(3)-GTTTACCT
Locus tag: Cyan8802_0353
Cyan8802_0353 -91 9.7 TTTAATCT-(3)-GATTACCT-(3)-GTTTACCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cysR
Ortholog function: Transcription regulator, Fnr-Crp family
Synechococcus sp. PCC 7002 SYNPCC7002_A1232 -126 8.7 CTTAAACT-(3)-GATTACAT-(3)-ATTTAACT
Cyanothece sp. PCC 8801 PCC8801_0346 -91 9.7 TTTAATCT-(3)-GATTACCT-(3)-GTTTACCT
Microcystis aeruginosa NIES-843 MAE_18440 -86 9.6 GTTAATCT-(3)-GATTACCT-(3)-GTTTACCT
Position: -278
Score: 7.9
Sequence: TTAAAATT-(3)-TTTTATTT-(3)-CTTTTATT
Locus tag: Cyan8802_0441
Cyan8802_0441 -278 7.9 TTAAAATT-(3)-TTTTATTT-(3)-CTTTTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fbp
Ortholog function: Fructose 1,6-bisphosphatase I (EC 3.1.3.11)
Cyanothece sp. ATCC 51142 cce_4758 -125 8.3 ATTAACCT-(3)-CTGAAATT-(3)-CTAAAGTT
Cyanothece sp. PCC 8801 PCC8801_0430 -278 7.9 TTAAAATT-(3)-TTTTATTT-(3)-CTTTTATT
Microcystis aeruginosa NIES-843 MAE_23860 -129 7.6 ATTAGCCA-(3)-CTAAAACT-(3)-CTAAAAAT
Nostoc sp. PCC 7120 all4021 -136 7 CGTAAACT-(3)-GATTTCTT-(3)-TTTATCTA
Trichodesmium erythraeum IMS101 Tery_0682 -336 6.5 TTTTAGAT-(3)-GTTTTTGT-(3)-CATTATCA
Position: -108
Score: 9.8
Sequence: TTTTATCA-(3)-GTTTACCT-(3)-CTTAACCC
Locus tag: Cyan8802_1053
Cyan8802_1053 -108 9.8 TTTTATCA-(3)-GTTTACCT-(3)-CTTAACCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: pstS
Ortholog function: Phosphate ABC transporter, substrate-binding protein
Cyanothece sp. ATCC 51142 cce_1163 -109 9.7 CTTAATCT-(3)-TTTTACTG-(3)-TTTAACCC
Cyanothece sp. PCC 8801 PCC8801_1024 -108 9.8 TTTTATCA-(3)-GTTTACCT-(3)-CTTAACCC
Thermosynechococcus elongatus BP-1 tlr2164 -51 10.9 TTTAAACA-(3)-TTTTACCT-(3)-CTTAACTT
Position: -224
Score: 8.8
Sequence: TTTAACAG-(3)-CTAAACCT-(3)-CTTAAACT
Locus tag: Cyan8802_1459
Cyan8802_1459 -224 8.8 TTTAACAG-(3)-CTAAACCT-(3)-CTTAAACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: spoT
Ortholog function: Guanosine-3',5'-bis(diphosphate) 3'-diphosphatase (EC 3.1.7.2)
Cyanothece sp. ATCC 51142 cce_4391 20 8.8 CTTTAACC-(3)-CTCAATCT-(3)-CTTAAACT
Cyanothece sp. PCC 8801 PCC8801_1433 -224 8.5 TTTAACAG-(3)-CTAAACCT-(3)-TTTAAACT
Trichodesmium erythraeum IMS101 Tery_2653 -43 7.8 AATAAACT-(3)-ATTTGATA-(3)-ATTAACTC
Position: -95
Score: 7.2
Sequence: TATTACCT-(3)-TATAGCCT-(3)-GATAGCCT
Locus tag: Cyan8802_1652
Cyan8802_1652 -95 7.2 TATTACCT-(3)-TATAGCCT-(3)-GATAGCCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ppk
Ortholog function: Polyphosphate kinase (EC 2.7.4.1)
Cyanothece sp. ATCC 51142 cce_5174 -70 8.4 GATAAAAA-(3)-CATAAAGT-(3)-CTTAAACT
Cyanothece sp. PCC 8801 PCC8801_1625 -95 7.2 TATTACCT-(3)-TATAGCCT-(3)-GATAGCCT
Cyanothece sp. PCC 7425 Cyan7425_1977 -238 8.4 GTTATCCC-(3)-GTTAATTT-(3)-ATTAAATC
Position: -246
Score: 9.8
Sequence: ATTAAACT-(3)-CTTAAATT-(3)-GTTAAATA
Locus tag: Cyan8802_1701
Cyan8802_1701 -246 9.8 ATTAAACT-(3)-CTTAAATT-(3)-GTTAAATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nucH
Ortholog function: Endonuclease/exonuclease/phosphatase
Cyanothece sp. PCC 8801 PCC8801_1683 -246 9.8 ATTAAACT-(3)-CTTAAATT-(3)-GTTAAATA
Position: -43
Score: 7.5
Sequence: AATAAATT-(3)-TCTTATTT-(3)-ATTATCTT
Locus tag: Cyan8802_1873
Cyan8802_1873 -43 7.5 AATAAATT-(3)-TCTTATTT-(3)-ATTATCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SYNPCC7002_A1357
Ortholog function: Conserved hypothetical protein
Synechococcus sp. PCC 7002 SYNPCC7002_A1357 -125 7.8 GCTAACCT-(3)-CTATATTT-(3)-TTTTATTT
Cyanothece sp. ATCC 51142 cce_3317 -44 8.4 CTTATCTA-(3)-CTTTATTT-(3)-TTTATACT
Cyanothece sp. PCC 8801 PCC8801_1847 -43 7.5 AATAAATT-(3)-TCTTATTT-(3)-ATTATCTT
Trichodesmium erythraeum IMS101 Tery_4322 -395 7 CTTATTAT-(3)-AATTATTT-(3)-ATTTAGCT
Thermosynechococcus elongatus BP-1 null -268 7.1 ATTAAAAA-(3)-ATTAAAAA-(3)-TTTCTCTT
Position: -162
Score: 7.4
Sequence: ATTAACGC-(3)-GATTAACC-(3)-CCTAATTA
Locus tag: Cyan8802_3716
Cyan8802_3716 -162 7.4 ATTAACGC-(3)-GATTAACC-(3)-CCTAATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: rsbU
Ortholog function: Protein serine/threonine phosphatase
Cyanothece sp. PCC 8801 PCC8801_3662 -162 7.4 ATTAACGC-(3)-GATTAACC-(3)-CCTAATTA
Nostoc sp. PCC 7120 all1758 -49 7.5 ATTTATTA-(3)-GTCAATCT-(3)-ATTAACCC
Trichodesmium erythraeum IMS101 Tery_0739 -250 8.3 TTAAAACT-(3)-CTTAATCT-(3)-ACTAACTC
Position: -157
Score: 8.1
Sequence: CTTAGCAT-(3)-CTTTTTCT-(3)-GCTAAACT
Locus tag: Cyan8802_4106
Cyan8802_4106 -157 8.1 CTTAGCAT-(3)-CTTTTTCT-(3)-GCTAAACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sphX
Ortholog function: Phosphate ABC transport system, substrate-binding protein
Synechocystis sp. PCC 6803 sll0679 -135 10.9 TTTAACCA-(3)-CTTTACTA-(3)-CTTAACCT
Cyanothece sp. ATCC 51142 cce_1859 -141 8.8 CTTAATAA-(3)-GTTTAACT-(3)-CTTCATAT
Cyanothece sp. PCC 8801 PCC8801_4067 -157 8.1 CTTAGCAT-(3)-CTTTTTCT-(3)-GCTAAACT
Position: -104
Score: 7.5
Sequence: GATAAGAT-(3)-GTTAAAGA-(3)-GTTAAAAT
Locus tag: Cyan8802_4217
Cyan8802_4217 -104 7.5 GATAAGAT-(3)-GTTAAAGA-(3)-GTTAAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: purF
Ortholog function: Amidophosphoribosyltransferase (EC 2.4.2.14)
Cyanothece sp. ATCC 51142 cce_1211 -143 7.7 TATAATCT-(3)-GTTTTATT-(3)-GTCTATTT
Cyanothece sp. PCC 8801 PCC8801_4178 -104 7.5 GATAAGAT-(3)-GTTAAAGA-(3)-GTTAAAAT
Nostoc sp. PCC 7120 all3651 -119 7.7 TTTAATAT-(3)-GTTAAAGA-(3)-GTTAAGAC
Trichodesmium erythraeum IMS101 Tery_3699 -97 8.3 GTTAAGGA-(3)-CTTAAAGT-(3)-TTTAAGCT
Synechococcus elongatus PCC 7942 Synpcc7942_0004 -76 7.8 GTTAAGTC-(3)-GTTAAATT-(3)-ATTAGCCG
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