Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of SphR regulog to Cyanothece sp. PCC 7425

Reference regulog properties
Source regulog: SphR - Cyanobacteria
Regulator type: Transcription factor
Regulator family: OmpR
Regulation mode: repressor (activator)
Biological process: Phosphate metabolism
Effector: Inorganic phosphate
Phylum: Cyanobacteria
Propagated regulon:
Target genome Cyanothece sp. PCC 7425
Orthologous TF(s) Cyan7425_0392
Regulated genes 4
Built upon 77 sites [see more]
Predicted regulatory interactions in Cyanothece sp. PCC 7425
Locus tag Position Score Sequence
Position: -81
Score: 7.8
Sequence: TTTAACGA-(3)-CTTTAGCA-(3)-GATTACCT
Locus tag: Cyan7425_0207
Cyan7425_0207 -81 7.8 TTTAACGA-(3)-CTTTAGCA-(3)-GATTACCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cysR
Ortholog function: Transcription regulator, Fnr-Crp family
Cyanothece sp. PCC 7425 Cyan7425_0207 -81 7.8 TTTAACGA-(3)-CTTTAGCA-(3)-GATTACCT
Thermosynechococcus elongatus BP-1 tll1671 -171 8.1 CTTAACCC-(3)-CTTGAACC-(3)-GATTATCT
Position: -238
Score: 8.4
Sequence: GTTATCCC-(3)-GTTAATTT-(3)-ATTAAATC
Locus tag: Cyan7425_1977
Cyan7425_1977 -238 8.4 GTTATCCC-(3)-GTTAATTT-(3)-ATTAAATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ppk
Ortholog function: Polyphosphate kinase (EC 2.7.4.1)
Cyanothece sp. ATCC 51142 cce_5174 -70 8.4 GATAAAAA-(3)-CATAAAGT-(3)-CTTAAACT
Cyanothece sp. PCC 8801 PCC8801_1625 -95 7.2 TATTACCT-(3)-TATAGCCT-(3)-GATAGCCT
Cyanothece sp. PCC 7425 Cyan7425_1977 -238 8.4 GTTATCCC-(3)-GTTAATTT-(3)-ATTAAATC
Position: -146
Score: 9
Sequence: ATTAATCA-(3)-GTTTACCT-(3)-CATAAATC
Locus tag: Cyan7425_4261
Cyan7425_4261 -146 9 ATTAATCA-(3)-GTTTACCT-(3)-CATAAATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: phoA1
Ortholog function: Alkaline phosphatase
Synechococcus sp. PCC 7002 SYNPCC7002_A2352 -182 7.5 ATTTAATT-(3)-TTTAGTTG-(3)-CTTAGCTA
-91 9.5 ATTAAACT-(3)-CTTAGTTT-(3)-TTTAACTC
Cyanothece sp. PCC 7425 Cyan7425_4261 -146 9 ATTAATCA-(3)-GTTTACCT-(3)-CATAAATC
Position: -102
Score: 7.5
Sequence: ATTATCAT-(3)-TATTACCT-(3)-CCTTACCC
Locus tag: Cyan7425_4387
Cyan7425_4387 -102 7.5 ATTATCAT-(3)-TATTACCT-(3)-CCTTACCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: SYNPCC7002_A2263
Ortholog function: Conserved hypothetical protein
Cyanothece sp. PCC 7425 Cyan7425_4387 -102 7.5 ATTATCAT-(3)-TATTACCT-(3)-CCTTACCC
Nostoc sp. PCC 7120 alr5259 -329 8.7 GTAAAACT-(3)-TTTATTTA-(3)-CTTAATTT
Trichodesmium erythraeum IMS101 Tery_2568 -208 7.5 GATAAGAT-(3)-ATTAACCT-(3)-GTTTGCTA
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