Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of SphR regulog to Nostoc punctiforme

Reference regulog properties
Source regulog: SphR - Cyanobacteria
Regulator type: Transcription factor
Regulator family: OmpR
Regulation mode: repressor (activator)
Biological process: Phosphate metabolism
Effector: Inorganic phosphate
Phylum: Cyanobacteria
Propagated regulon:
Target genome Nostoc punctiforme
Orthologous TF(s) Npun_F4214
Regulated genes 6
Built upon 77 sites [see more]
Predicted regulatory interactions in Nostoc punctiforme
Locus tag Position Score Sequence
Position: -162
Score: 9.2
Sequence: CTTAACAA-(3)-CTTAATTT-(3)-CTTGATCC
Locus tag: Npun_R0280
Npun_R0280 -162 9.2 CTTAACAA-(3)-CTTAATTT-(3)-CTTGATCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: phoD
Ortholog function: Phosphodiesterase/alkaline phosphatase D
Nostoc sp. PCC 7120 alr4976 -10 7.6 ATTAATTA-(3)-TGTTACCT-(3)-ATTTATAT
Position: -93
Score: 10.1
Sequence: ATTAACCT-(3)-GATAACTT-(3)-CTTTACTT
Locus tag: Npun_R3764
Npun_R3764 -93 10.1 ATTAACCT-(3)-GATAACTT-(3)-CTTTACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: phoD
Ortholog function: Phosphodiesterase/alkaline phosphatase D
Nostoc sp. PCC 7120 all0207 -98 9.3 ATTAACCC-(3)-GATAACTC-(3)-CTTTACTT
Synechococcus sp. JA-3-3Ab CYA_2506 -129 7.9 CTTAAACA-(3)-GCTAACCC-(3)-TTTCACCG
Position: -342
Score: 7.3
Sequence: ATTAATTA-(3)-GTTTTCAT-(3)-CTGAATAT
Locus tag: Npun_F6321
Npun_F6321 -342 7.3 ATTAATTA-(3)-GTTTTCAT-(3)-CTGAATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SYNPCC7002_A0979
Ortholog function: Transcription regulator, OmpR family
Cyanothece sp. PCC 8801 PCC8801_2302 -232 7.1 CATAATGA-(3)-TTTTAAGA-(3)-GTTAAAAA
Nostoc sp. PCC 7120 all3822 -149 8.6 CTTAATTT-(3)-CTTAAGTA-(3)-CTCAAATT
Trichodesmium erythraeum IMS101 Tery_0954 -309 8.3 ATTAACCA-(3)-ATTGAATT-(3)-ATTGACTT
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