Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of IlvY regulog to Yersinia pestis Nepal516

Reference regulog properties
Source regulog: IlvY - Enterobacteriales
Regulator type: Transcription factor
Regulator family: LysR
Regulation mode: repressor (activator)
Biological process: Branched-chain amino acid biosynthesis
Effector: 2-Acetolactate
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Yersinia pestis Nepal516
Orthologous TF(s) YPN_0076
Regulated genes 2
Built upon 46 sites [see more]
Predicted regulatory interactions in Yersinia pestis Nepal516
Locus tag Position Score Sequence
Position: -103
Score: 4.7
Sequence: ATTGCGGAAATTGATAT
Position: -72
Score: 5.1
Sequence: ATTGCAGTTTCTGCAAT
Locus tag: YPN_0076
YPN_0076 -103 4.7 ATTGCGGAAATTGATAT
-72 5.1 ATTGCAGTTTCTGCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ilvY
Ortholog function: transcriptional activator IlvY
Escherichia coli str. K-12 substr. MG1655 b3773 -70 4.7 ATTGCGGAAATTGATAT
-39 5.2 ATTGCAATTTTTGCAAC
Salmonella typhimurium LT2 STM3908 -70 4.7 ATTGCGGAAATTGATAT
-39 4.8 GTTGCGGTTTATGCAAC
Citrobacter koseri ATCC BAA-895 CKO_00112 -142 4.7 ATTGCGGAAATTGATAT
-111 5.1 ATTGCAATTTCTGCAAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04272 -70 4.7 ATTGCGGAAATTGATAT
-39 4.9 GTTGCATTTTATGAAAT
Enterobacter sp. 638 Ent638_4010 -70 4.7 ATTGCGGAAATTGATAT
-39 5 GTTGCAATTTCTGCAAC
Erwinia amylovora ATCC 49946 EAM_0156 -70 4.7 ATTGCTTAAATTGATAT
-39 4.8 GTTGCACATTCTGCAAC
Yersinia pestis KIM y0344 -100 4.7 ATTGCGGAAATTGATAT
-69 5.1 ATTGCAGTTTCTGCAAT
Serratia proteamaculans 568 Spro_4752 -41 4.6 GTTGCTTAAATTGATAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4222 -71 4.6 GTTGCTTAAATTGATAT
-40 4.4 ATTGCACTATCTGCAAG
Edwardsiella tarda EIB202 ETAE_0093 -68 4.6 GTTGCTTAAATTGATAT
-37 4.9 ATTGCGTATTTTGCAAC
Proteus mirabilis HI4320 PMI3304 -80 4.7 ATTGCTTAAATTGATAT
-49 5 GTTGCAATAAATGCAAC
Photorhabdus luminescens subsp. laumondii TTO1 plu4669 -81 4.7 ATTGCTTAAATTGATAT
-50 5.1 ATTGCATTTTATGCAAC
Position: -230
Score: 5.1
Sequence: ATTGCAGAAACTGCAAT
Position: -199
Score: 4.7
Sequence: ATATCAATTTCCGCAAT
Locus tag: YPN_0077
YPN_0077 -230 5.1 ATTGCAGAAACTGCAAT
-199 4.7 ATATCAATTTCCGCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ilvC
Ortholog function: ketol-acid reductoisomerase
Escherichia coli str. K-12 substr. MG1655 b3774 -127 5.2 GTTGCAAAAATTGCAAT
-96 4.7 ATATCAATTTCCGCAAT
Salmonella typhimurium LT2 STM3909 -141 4.8 GTTGCATAAACCGCAAC
-110 4.7 ATATCAATTTCCGCAAT
Citrobacter koseri ATCC BAA-895 CKO_00113 -143 5.1 GTTGCAGAAATTGCAAT
-112 4.7 ATATCAATTTCCGCAAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04273 -130 4.9 ATTTCATAAAATGCAAC
-99 4.7 ATATCAATTTCCGCAAT
Enterobacter sp. 638 Ent638_4009 -137 5 GTTGCAGAAATTGCAAC
-106 4.7 ATATCAATTTCCGCAAT
Erwinia amylovora ATCC 49946 EAM_0157 -143 4.8 GTTGCAGAATGTGCAAC
-112 4.7 ATATCAATTTAAGCAAT
Yersinia pestis KIM y0345 -230 5.1 ATTGCAGAAACTGCAAT
-199 4.7 ATATCAATTTCCGCAAT
Serratia proteamaculans 568 Spro_4751 -125 4.6 ATATCAATTTAAGCAAC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4221 -144 4.4 CTTGCAGATAGTGCAAT
-113 4.6 ATATCAATTTAAGCAAC
Edwardsiella tarda EIB202 ETAE_0094 -178 4.9 GTTGCAAAATACGCAAT
-147 4.6 ATATCAATTTAAGCAAC
Proteus mirabilis HI4320 PMI3305 -140 5 GTTGCATTTATTGCAAC
-109 4.7 ATATCAATTTAAGCAAT
Photorhabdus luminescens subsp. laumondii TTO1 plu4668 -156 5.1 GTTGCATAAAATGCAAT
-125 4.7 ATATCAATTTAAGCAAT
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