Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of PurR regulog to Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91

Reference regulog properties
Source regulog: PurR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Purine metabolism
Effector: Hypoxanthine; Guanine
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91
Orthologous TF(s) SG1688
Regulated genes 25
Built upon 313 sites [see more]
Predicted regulatory interactions in Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91
Locus tag Position Score Sequence
Position: -237
Score: 5.1
Sequence: GCGCAAGCGTTTTCTA
Locus tag: SG0069
SG0069 -237 5.1 GCGCAAGCGTTTTCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: carA
Ortholog function: carbamoyl-phosphate synthase small subunit
Escherichia coli str. K-12 substr. MG1655 b0032 -236 4.9 GCGCAAGCGTTTTCCA
Salmonella typhimurium LT2 STM0066 -236 5.1 GCGCAAGCGTTTTCTA
Citrobacter koseri ATCC BAA-895 CKO_03351 -209 5.1 ACGCAAGCGTTTTCCA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00040 -208 5 CCGCAAGCGTTTTCTC
Enterobacter sp. 638 Ent638_0591 -235 4.7 GTACAAACGTTTTCCT
Erwinia amylovora ATCC 49946 EAM_0660 -239 3.9 AGACAACCGATTTTAT
Yersinia pestis KIM y3693 -213 5.1 TCGCAACCGTTTACTC
Serratia proteamaculans 568 Spro_0713 -240 4.7 CCGCAACCGTTTACCA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3871 -239 5 TAGCAACCGTTTACTT
Proteus mirabilis HI4320 PMI0020 -240 4.5 AAGCAAACGGTTAAAT
Position: -154
Score: 5.6
Sequence: ACGCAATCGATTACGT
Locus tag: SG0424
SG0424 -154 5.6 ACGCAATCGATTACGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: tsx
Ortholog function: nucleoside-specific channel-forming protein
Escherichia coli str. K-12 substr. MG1655 b0411 -154 5.6 ACGCAATCGATTACGT
Salmonella typhimurium LT2 STM0413 -166 4.4 GCGCAAACGTGAACGC
-154 5.6 ACGCAATCGATTACGT
Citrobacter koseri ATCC BAA-895 CKO_02750 -168 4.6 ACGCAAACGTGAACGC
-156 5.6 ACGCAATCGATTACGT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00363 -156 5.4 ACGCAATCGATTACGC
Enterobacter sp. 638 Ent638_0879 -161 4.6 ACGCAAACGTGAACGC
-149 5.6 ACGCAATCGATTACGT
Erwinia amylovora ATCC 49946 EAM_2589 -290 5.1 AGGCAATCGTTTACCC
Serratia proteamaculans 568 Spro_2072 -181 5.2 ACGCAATCGATTACCT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3796 -129 5.6 AGGCAACCGTTTTCGT
Edwardsiella tarda EIB202 ETAE_2935 -184 5.4 ACGCAATCGATTACGC
Position: -87
Score: 5.5
Sequence: ACGCAACCGTTTTCCT
Locus tag: SG0546
SG0546 -87 5.5 ACGCAACCGTTTTCCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: purE
Ortholog function: phosphoribosylaminoimidazole carboxylase catalytic subunit
Escherichia coli str. K-12 substr. MG1655 b0523 -87 5.5 ACGCAACCGTTTTCCT
Salmonella typhimurium LT2 STM0534 -87 5.5 ACGCAACCGTTTTCCT
Citrobacter koseri ATCC BAA-895 CKO_02635 -87 5.5 ACGCAACCGTTTTCCT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00478 -88 5.5 ACGCAACCGTTTTCCT
Enterobacter sp. 638 Ent638_0977 -86 5.5 ACGCAACCGTTTTCCT
Erwinia amylovora ATCC 49946 EAM_1060 -111 5.5 ACGCAACCGTTTTCCT
Yersinia pestis KIM y1103 -116 5.5 ACGCAACCGTTTTCCT
Serratia proteamaculans 568 Spro_1163 -108 5.5 ACGCAACCGTTTTCCT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3156 -130 5.5 ACGCAACCGTTTTCCT
Edwardsiella tarda EIB202 ETAE_2700 -114 5.7 ACGCAAACGTTTTCCT
Proteus mirabilis HI4320 PMI2161 -91 5.7 ACGCAAACGTTTTCCT
Photorhabdus luminescens subsp. laumondii TTO1 plu3807 -99 5.5 ACGCAATCGTTTTCCT
Position: -89
Score: 4.3
Sequence: ACACAAACGTTAACTG
Locus tag: SG0554
SG0554 -89 4.3 ACACAAACGTTAACTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: folD
Ortholog function: 5,10-methylene-tetrahydrofolate dehydrogenase
Salmonella typhimurium LT2 STM0542 -89 4.3 ACACAAACGTTAACTG
Citrobacter koseri ATCC BAA-895 CKO_02629 -89 4.6 ACGCAAACGATAACTG
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00484 -88 3.7 CAGCAAACGAGGACTG
Yersinia pestis KIM y1110 -155 3.8 GGGCAGTCGCTTTCGA
Proteus mirabilis HI4320 PMI2155 21 4.1 GGGAAAACGATTGCGC
Photorhabdus luminescens subsp. laumondii TTO1 plu4317 21 4.1 GGGAAAACGATTGCGC
Position: -101
Score: 4
Sequence: AGGAAAACGATTGCTA
Locus tag: SG0948
SG0948 -101 4 AGGAAAACGATTGCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: pyrD
Ortholog function: dihydroorotate dehydrogenase
Escherichia coli str. K-12 substr. MG1655 b0945 -102 4.2 CGGAAAACGTTTGCGT
Salmonella typhimurium LT2 STM1058 -101 4 AGGAAAACGATTGCTA
Citrobacter koseri ATCC BAA-895 CKO_02123 -101 4 AGGAAAACGATTGCTA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00974 -111 4.4 AGGTAATCGTTTGCGC
Enterobacter sp. 638 Ent638_1457 -110 4.3 AGGAAAACGATTGCGC
Erwinia amylovora ATCC 49946 EAM_1366 -101 3.8 AAATAAACGTTTTTTA
Yersinia pestis KIM y2755 -254 5.4 TCGCAAACGTTTACTT
Serratia proteamaculans 568 Spro_1740 -110 4.2 GGGAAAACGATTGCGT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2538 -126 4.7 CCGCAAACGTTTTACT
Edwardsiella tarda EIB202 ETAE_1248 -108 3.9 AGTAAAACGTTTGCTT
Proteus mirabilis HI4320 PMI0771 -102 4.2 ATTGAAACGTTTACTT
Position: -51
Score: 6
Sequence: ACGCAAACGTTTTCGT
Locus tag: SG1169
SG1169 -51 6 ACGCAAACGTTTTCGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: purT
Ortholog function: phosphoribosylglycinamide formyltransferase 2
Escherichia coli str. K-12 substr. MG1655 b1849 -53 6 ACGCAAACGTTTTCGT
Salmonella typhimurium LT2 STM1883 -51 6 ACGCAAACGTTTTCGT
Citrobacter koseri ATCC BAA-895 CKO_01117 -52 6 ACGCAAACGTTTTCGT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02364 -56 6 ACGCAAACGTTTTCGT
Enterobacter sp. 638 Ent638_2418 -49 6 ACGCAAACGTTTTCGT
Erwinia amylovora ATCC 49946 EAM_1994 -58 6 ACGCAAACGTTTTCGT
Yersinia pestis KIM y2533 -85 5.9 ACGCAATCGTTTTCGT
Serratia proteamaculans 568 Spro_2805 -74 6 ACGCAAACGTTTTCGT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2477 -59 6 ACGCAAACGTTTTCGT
Edwardsiella tarda EIB202 ETAE_1838 -107 5.9 ACGCAAACGGTTTCGT
Proteus mirabilis HI4320 PMI2187 -50 5.4 ATGCAAACGTTTGCGT
Position: -58
Score: 5.4
Sequence: AGGCAAACGTTTACCT
Position: 28
Score: 4.4
Sequence: GAGCAAACGTTTCCAC
Locus tag: SG1688
SG1688 -58 5.4 AGGCAAACGTTTACCT
28 4.4 GAGCAAACGTTTCCAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: purR
Ortholog function: purine nucleotide synthesis repressor
Escherichia coli str. K-12 substr. MG1655 b1658 -60 5.4 AGGCAAACGTTTACCT
28 4.4 GAGCAAACGTTTCCAC
Salmonella typhimurium LT2 STM1430 -58 5.4 AGGCAAACGTTTACCT
28 4.3 GGGCAAACGTTTCCAC
Citrobacter koseri ATCC BAA-895 CKO_01672 -60 5.6 AGGCAAACGTTTACTT
28 4.4 GAGCAAACGTTTCCAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01996 -59 5.7 AGGCAAACGTTTACGT
28 4.6 GCGCAAACGTTTCCAC
Enterobacter sp. 638 Ent638_1789 -60 5.4 AGGCAAACGTTTACCT
28 4.6 GCGCAAACGTTTCCAC
Erwinia amylovora ATCC 49946 EAM_1663 -62 4.3 AGGCAAACGATTAACA
Yersinia pestis KIM y1950 -62 4.3 AGGCAAACGATTAACA
Serratia proteamaculans 568 Spro_2195 -62 4.3 AGGCAAACGATTAACA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1925 -60 4.3 AGGCAAACGATTAACA
Edwardsiella tarda EIB202 ETAE_1674 -57 4.3 AGGCAAACGATTAACA
Position: -100
Score: 5
Sequence: ACGCAAACGATTAAGC
Locus tag: SG1752
SG1752 -100 5 ACGCAAACGATTAAGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ydiJ
Ortholog function: predicted FAD-linked oxidoreductase
Escherichia coli str. K-12 substr. MG1655 b1687 -224 4.9 ACGCAAACGATTTACT
Salmonella typhimurium LT2 STM1365 -100 5 ACGCAAACGATTAAGC
Citrobacter koseri ATCC BAA-895 CKO_01722 -49 4.7 ACGCAAACGATTAAAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02158 -68 5.2 ACGCAAACGTTTAGTT
Enterobacter sp. 638 Ent638_1747 -165 5 ACGCAAACGATTATCT
Erwinia amylovora ATCC 49946 EAM_1648 -35 4 ACGCAATCGATTCTCA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1856 -237 4.2 GCGCACACGATTGCGA
Photorhabdus luminescens subsp. laumondii TTO1 plu2626 -129 3.7 AGGTAAACGCTTGCCT
Position: -65
Score: 4.6
Sequence: ACGAAAACGTTTCCGC
Locus tag: SG1959
SG1959 -65 4.6 ACGAAAACGTTTCCGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: pyrC
Ortholog function: dihydroorotase
Escherichia coli str. K-12 substr. MG1655 b1062 -67 4.3 AGGAAAACGTTTCCGC
Salmonella typhimurium LT2 STM1163 -65 4.6 ACGAAAACGTTTCCGC
Citrobacter koseri ATCC BAA-895 CKO_02001 -66 4.6 ACGAAAACGTTTCCGC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01074 -77 4.9 AGGAAAACGTTTACGC
Enterobacter sp. 638 Ent638_1576 -82 5.1 ACGAAAACGTTTACGC
Proteus mirabilis HI4320 PMI1678 -99 4.2 ATTTAATCGTTTTCGT
-48 3.8 ATCCAATCGTTGATCT
Position: -72
Score: 5.9
Sequence: ACGCAAACGTTTTCTT
Locus tag: SG2393
SG2393 -72 5.9 ACGCAAACGTTTTCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cvpA
Ortholog function: membrane protein required for colicin V production
Escherichia coli str. K-12 substr. MG1655 b2313 -72 5.9 ACGCAAACGTTTTCTT
Salmonella typhimurium LT2 STM2363 -72 5.9 ACGCAAACGTTTTCTT
Citrobacter koseri ATCC BAA-895 CKO_00473 -72 5.9 ACGCAAACGTTTTCTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02703 -71 5.9 ACGCAAACGTTTTCTT
Enterobacter sp. 638 Ent638_2862 -72 5.9 ACGCAAACGTTTTCTT
Erwinia amylovora ATCC 49946 EAM_2319 -92 5.9 ACGCAAACGTTTTCTT
Yersinia pestis KIM y1604 -74 5.9 ACGCAAACGTTTTCTT
Serratia proteamaculans 568 Spro_3329 -74 6 ACGCAAACGTTTACGT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3053 -90 5.9 ACGCAAACGTTTTCTT
Proteus mirabilis HI4320 PMI1784 -71 6 ACGCAAACGTTTTCGT
Photorhabdus luminescens subsp. laumondii TTO1 plu3168 -72 6 ACGCAAACGTTTTCGT
Position: -131
Score: 5
Sequence: ACGCAAACGTGTGCGT
Locus tag: SG2517
SG2517 -131 5 ACGCAAACGTGTGCGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: purC
Ortholog function: phosphoribosylaminoimidazole-succinocarboxamidesynthase
Escherichia coli str. K-12 substr. MG1655 b2476 -169 5 ACGCAAACGTGTGCGT
Salmonella typhimurium LT2 STM2487 -131 5 ACGCAAACGTGTGCGT
Citrobacter koseri ATCC BAA-895 CKO_00311 -145 5 ACGCAAACGTGTGCGT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02810 -187 5 ACGCAAACGTGTGCGT
Enterobacter sp. 638 Ent638_2972 -68 5 ACGCAAACGTGTGCGT
Erwinia amylovora ATCC 49946 EAM_2430 -151 4.6 ACGTAAACGATTGCTT
Serratia proteamaculans 568 Spro_3507 -88 4.1 ACGGTATCGTTTGCGT
Edwardsiella tarda EIB202 ETAE_1098 -97 4.5 ACGCAATCGTTTGGCT
Position: -61
Score: 5.1
Sequence: TCGCAAACGTTTGCTT
Locus tag: SG2531
SG2531 -61 5.1 TCGCAAACGTTTGCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: purM
Ortholog function: phosphoribosylformylglycinamidine cyclo-ligase
Escherichia coli str. K-12 substr. MG1655 b2499 -79 5.1 TCGCAAACGTTTGCTT
Salmonella typhimurium LT2 STM2499.S -63 5.1 TCGCAAACGTTTGCTT
Citrobacter koseri ATCC BAA-895 CKO_00291 -299 5.1 TCGCAAACGTTTGCTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02824 -74 5.1 TCGCAAACGTTTGCTT
Enterobacter sp. 638 Ent638_2988 -79 4.9 TCGCAAACGTTTGCCT
Erwinia amylovora ATCC 49946 EAM_2441 -84 5.1 TCGCAAACGTTTGCTT
Yersinia pestis KIM y1407 -242 4.9 TCGCAAACGTTTGCCT
Serratia proteamaculans 568 Spro_3524 -59 4.9 TCGCAAACGTTTGCCT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1254 -129 4.6 TCGCAAACGATTGCCT
Edwardsiella tarda EIB202 ETAE_1086 -116 4.9 TAGCAAACGTTTGCTT
Proteus mirabilis HI4320 PMI1575 -79 5.1 TCGCAAACGTTTGCTT
Photorhabdus luminescens subsp. laumondii TTO1 plu2760 -80 5.1 TCGCAAACGTTTGCTT
Position: -68
Score: 5.3
Sequence: ATGCAACCGATTACGT
Locus tag: SG2543
SG2543 -68 5.3 ATGCAACCGATTACGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: guaB
Ortholog function: inosine-5'-monophosphate dehydrogenase
Escherichia coli str. K-12 substr. MG1655 b2508 -69 5.2 ATGCAATCGGTTACGC
Salmonella typhimurium LT2 STM2511 -68 5.3 ATGCAACCGATTACGT
Citrobacter koseri ATCC BAA-895 CKO_00279 -69 5.3 ATGCAATCGGTTTCGC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02834 -66 5.2 ATGCAATCGGTTACGC
Enterobacter sp. 638 Ent638_2999 -67 5.2 ATGCAATCGGTTACGC
Erwinia amylovora ATCC 49946 EAM_2465 -78 4.9 AGGCAATCGATTACGG
Yersinia pestis KIM y1362 6 5.2 AGGCAATCGATTACGC
Serratia proteamaculans 568 Spro_3596 -78 5.1 AGGCAACCGATTACGC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3209 -79 5.2 AGGCAATCGATTACGC
Edwardsiella tarda EIB202 ETAE_2787 -79 5 AGGCAACCGGTTTCGG
Proteus mirabilis HI4320 PMI1546 -77 4.9 AAGCAACCGATTACGG
Photorhabdus luminescens subsp. laumondii TTO1 plu2713 -80 5.3 AGGCAACCGATTACGT
Position: -132
Score: 4.5
Sequence: AGGTAATCGTTTGCGT
Locus tag: SG2592
SG2592 -132 4.5 AGGTAATCGTTTGCGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glyA
Ortholog function: serine/glycine hydroxymethyltransferase
Escherichia coli str. K-12 substr. MG1655 b2551 -134 4.5 AGGTAATCGTTTGCGT
Salmonella typhimurium LT2 STM2555 -132 4.5 AGGTAATCGTTTGCGT
Citrobacter koseri ATCC BAA-895 CKO_00237 -126 4.5 AGGTAATCGTTTGCGT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02876 -133 4.5 AGCCAATCGTTTGCGT
Enterobacter sp. 638 Ent638_3036 -131 4.7 AGGTAAACGTTTGCGT
Erwinia amylovora ATCC 49946 EAM_2497 -129 4.5 AGCCAATCGTTTGCGT
Yersinia pestis KIM y1322 -324 4.5 AGCCAATCGTTTGCGT
Serratia proteamaculans 568 Spro_3638 -135 4 TGCCAATCGTTTGCGT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3250 -152 3.8 AGCTAATCGTTTGCGT
Edwardsiella tarda EIB202 ETAE_2821 -147 4 TGCCAAACGATTGCGT
Proteus mirabilis HI4320 PMI1867 -128 4.7 TAGCAAACGATTGCGT
Photorhabdus luminescens subsp. laumondii TTO1 plu3291 -126 5.2 ATGCAATCGTTTGCGT
Position: -90
Score: 5.9
Sequence: ACGCAAACGGTTTCGT
Locus tag: SG2602
SG2602 -90 5.9 ACGCAAACGGTTTCGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: purL
Ortholog function: phosphoribosylformylglycinamidine synthase
Escherichia coli str. K-12 substr. MG1655 b2557 -92 5.9 ACGCAAACGGTTTCGT
Salmonella typhimurium LT2 STM2565 -90 5.9 ACGCAAACGGTTTCGT
Citrobacter koseri ATCC BAA-895 CKO_00226 29 5.9 ACGCAAACGGTTTCGT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02882 -91 5.9 ACGCAAACGGTTTCGT
Enterobacter sp. 638 Ent638_3042 -101 5.9 ACGCAAACGGTTTCGT
Erwinia amylovora ATCC 49946 EAM_2502 -104 5.6 GCGCAAACGGTTTCGT
Yersinia pestis KIM y1309 -130 5.9 ACGCAAACGGTTTCGT
Serratia proteamaculans 568 Spro_3654 -113 5.9 ACGCAAACGGTTTCGT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3258 -113 5.9 ACGCAAACGGTTTCGT
Edwardsiella tarda EIB202 ETAE_0774 -116 5.9 ACGCAAACGGTTTCGT
Proteus mirabilis HI4320 PMI1875 -98 5.9 ACGCAAACGGTTTCGT
Photorhabdus luminescens subsp. laumondii TTO1 plu3317 -91 5.9 ACGCAAACGGTTTCGT
Position: -117
Score: 3.9
Sequence: ACGCGAATGATTTTGC
Position: -103
Score: 4.1
Sequence: GCGTATTCGTTTTCGC
Locus tag: SG2948
SG2948 -117 3.9 ACGCGAATGATTTTGC
-103 4.1 GCGTATTCGTTTTCGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: gcvP
Ortholog function: Glycine cleavage system, glycine decarboxylating dehydrogenase (EC 1.4.4.2)
Escherichia coli str. K-12 substr. MG1655 b2903 -106 3.8 AAGAGAACGATTGCGT
Salmonella typhimurium LT2 STM3053 -108 4 AAGAGAACGTTTGCGT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03339 -107 4 AAGAGAACGTTTGCGT
Enterobacter sp. 638 Ent638_3322 -104 4 AAGAGAACGTTTGCGT
Erwinia amylovora ATCC 49946 EAM_2789 -74 4 AGGGTAACGTTTGCGT
Yersinia pestis KIM y3292 -104 4 GAGCAAAAGGTATCGT
-98 3.8 AAGGTATCGTTTGCGT
Serratia proteamaculans 568 Spro_3914 -163 3.8 AAGGTATCGTTTGCGT
Proteus mirabilis HI4320 PMI2019 -118 4.3 GCGCAATTGTTTTATT
Photorhabdus luminescens subsp. laumondii TTO1 plu3596 -108 3.8 AAGATATCGTTTGCGT
Position: -108
Score: 3.7
Sequence: AAGAGAGCGTTTGCGT
Locus tag: SG2950
SG2950 -108 3.7 AAGAGAGCGTTTGCGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gcvT
Ortholog function: Glycine cleavage system, aminomethyltransferase (EC 2.1.2.10)
Escherichia coli str. K-12 substr. MG1655 b2905 -106 3.8 AAGAGAACGATTGCGT
Salmonella typhimurium LT2 STM3055 -108 4 AAGAGAACGTTTGCGT
Citrobacter koseri ATCC BAA-895 CKO_04269 -106 4 AAGAGAACGTTTGCGT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03341 -107 4 AAGAGAACGTTTGCGT
Enterobacter sp. 638 Ent638_3324 -104 4 AAGAGAACGTTTGCGT
Erwinia amylovora ATCC 49946 EAM_2791 -74 4 AGGGTAACGTTTGCGT
Yersinia pestis KIM y3294 -104 4 GAGCAAAAGGTATCGT
-98 3.8 AAGGTATCGTTTGCGT
Serratia proteamaculans 568 Spro_3916 -163 3.8 AAGGTATCGTTTGCGT
Photorhabdus luminescens subsp. laumondii TTO1 plu3598 -108 3.8 AAGATATCGTTTGCGT
Position: -103
Score: 4.2
Sequence: GCGCAAACGTTCATAT
Locus tag: SG2957
SG2957 -103 4.2 GCGCAAACGTTCATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: serA
Ortholog function: D-3-phosphoglycerate dehydrogenase
Escherichia coli str. K-12 substr. MG1655 b2913 -95 4.5 ACGCAAACGTTCATAT
Salmonella typhimurium LT2 STM3062 -102 4.2 GCGCAAACGTTCATAT
Citrobacter koseri ATCC BAA-895 CKO_04278 -105 4.5 ACGCAAACGTTCATAT
-87 4.3 CCGCAATAGTTTTTTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03348 -99 4.5 ACGCAAACGTTCATAT
Enterobacter sp. 638 Ent638_3332 -100 4.5 ACGCAAACGTTCATAT
Erwinia amylovora ATCC 49946 EAM_2798 -213 4.8 AGGCAATCGTTTTTAT
Yersinia pestis KIM y3301 9 4.4 AGGCAATCGTTTGTAT
Serratia proteamaculans 568 Spro_3923 -99 4.1 GGGCAATCGTTTGTAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3905 -98 4.4 AAGCAATCGTTTGTAT
Proteus mirabilis HI4320 PMI2031 -94 4 GTGCAATCGGTTGTAT
Photorhabdus luminescens subsp. laumondii TTO1 plu3605 -91 4.3 TAGCAATCGTTTATAT
Position: -74
Score: 4.8
Sequence: ACGAAAACGTTTGCTT
Locus tag: SG3223
SG3223 -74 4.8 ACGAAAACGTTTGCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: codB
Ortholog function: cytosine permease
Escherichia coli str. K-12 substr. MG1655 b0336 -82 4.6 ACGAAAACGATTGCTT
Salmonella typhimurium LT2 STM3333 -74 4.8 ACGAAAACGTTTGCTT
Edwardsiella tarda EIB202 ETAE_3253 -83 4.6 AAGAAAACGTTTGCTT
Proteus mirabilis HI4320 PMI1458 -80 4.4 ACGAAAACGTTTGCAT
Position: -123
Score: 5.8
Sequence: GCGCAAACGTTTTCGT
Locus tag: SG3430
SG3430 -123 5.8 GCGCAAACGTTTTCGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: purH
Ortholog function: phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase
Escherichia coli str. K-12 substr. MG1655 b4006 -123 5.8 GCGCAAACGTTTTCGT
Salmonella typhimurium LT2 STM4176 -123 5.8 GCGCAAACGTTTTCGT
Citrobacter koseri ATCC BAA-895 CKO_02983 -123 5.8 GCGCAAACGTTTTCGT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04388 -126 5.8 GCGCAAACGTTTTCGT
Enterobacter sp. 638 Ent638_0216 -60 5.8 GCGCAAACGTTTTCGT
Erwinia amylovora ATCC 49946 EAM_0249 -144 5.7 GCGCAAACGTTTTCGC
Yersinia pestis KIM y0502 -111 5.7 ACGCAATCGTTTTCGC
Serratia proteamaculans 568 Spro_0293 -179 5.9 ACGCAAACGTTTTCGC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0241 -159 5.9 ACGCAAACGTTTTCGC
Edwardsiella tarda EIB202 ETAE_0186 -116 6 ACGCAAACGTTTTCGT
Proteus mirabilis HI4320 PMI2768 -155 5.6 ACGCAAACGTTTGCGT
Photorhabdus luminescens subsp. laumondii TTO1 plu0495 -283 6 ACGCAAACGTTTTCGT
Position: -118
Score: 4.9
Sequence: ACGCAATCGTTGCCGT
Locus tag: SG3583
SG3583 -118 4.9 ACGCAATCGTTGCCGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: purP
Ortholog function: high affinity adenine permease
Escherichia coli str. K-12 substr. MG1655 b3714 -147 3.7 AGTTTAACGTTTTCGT
-115 4.9 ACGCAATCGTTGCCGT
Salmonella typhimurium LT2 STM3851.S -118 4.9 ACGCAATCGTTGCCGT
Citrobacter koseri ATCC BAA-895 CKO_00059 -148 3.7 AGTTTAACGTTTTCGT
-116 4.9 ACGCAATCGTTGCCGT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04124 -151 3.7 AGTTTAACGTTTTCGT
-119 4.9 ACGCAATCGTTGCCGT
Enterobacter sp. 638 Ent638_4143 -115 4.9 ACGCAATCGTTGCCGT
Erwinia amylovora ATCC 49946 EAM_3460 -99 4.8 GCGCAATCGGTTGCGA
Serratia proteamaculans 568 Spro_0021 87 4 ACGGAAACGATTGCCG
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4464 162 4 ACGGAAACGATTGCCG
Edwardsiella tarda EIB202 ETAE_3545 -132 3.8 ATATAAGCGTTTGCGT
Proteus mirabilis HI4320 PMI2915 -92 5.5 ACGCAATCGATTACTT
Position: -68
Score: 4.7
Sequence: TAGCAATCGTTTGCTT
Position: 30
Score: 4.9
Sequence: GCGCAACCGGTTGCGC
Locus tag: SG3685
SG3685 -68 4.7 TAGCAATCGTTTGCTT
30 4.9 GCGCAACCGGTTGCGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: xanP
Ortholog function: xanthine/uracil permease, NCS2 family
Escherichia coli str. K-12 substr. MG1655 b3654 -68 4.8 TGGCAAACGTTTGCTT
30 4.9 GCGCAACCGGTTGCGC
Salmonella typhimurium LT2 STM3747 -68 4.9 TCGCAATCGTTTGCTT
30 4.9 GCGCAACCGGTTGCGC
Citrobacter koseri ATCC BAA-895 CKO_05111 -53 5.1 ATGCAATCGTTTGCTT
45 4.9 GCGCAACCGGTTGCGC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04013 -68 4.8 TGGCAAACGTTTGCTT
30 4.9 GCGCAACCGGTTGCGC
Enterobacter sp. 638 Ent638_0073 -68 4.9 TCGCAACCGTTTGCTT
30 4.8 GCGCAACCGATTGCGC
Erwinia amylovora ATCC 49946 EAM_0040 -69 4.6 TAGCAAACGATTGCTT
Yersinia pestis KIM y0107 -18 5.1 GCGCAAACGATTGCTT
Serratia proteamaculans 568 Spro_4873 -70 5.1 GCGCAACCGTTTGCTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0035 -74 4.9 TAGCAAACGTTTGCTT
Edwardsiella tarda EIB202 ETAE_0025 -70 5.3 ACGCAAACGATTGCTT
Proteus mirabilis HI4320 PMI2868 -68 5.3 ACGCAAACGATTGCTT
Photorhabdus luminescens subsp. laumondii TTO1 plu0247 -68 5.3 ACGCAAACGATTGCTT
Position: -108
Score: 3.7
Sequence: AGGTTAACGATTGCGT
Locus tag: SG3858
SG3858 -108 3.7 AGGTTAACGATTGCGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yhhQ
Ortholog function: conserved inner membrane protein
Escherichia coli str. K-12 substr. MG1655 b3471 -159 3.7 AGGTTAACGATTGCGT
Salmonella typhimurium LT2 STM3579 -108 3.7 AGGTTAACGATTGCGT
Citrobacter koseri ATCC BAA-895 CKO_04901 -109 3.8 AAGTTAACGATTGCGT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03837 -147 3.8 AGGTTAACGTTTGCGC
-93 3.7 ATGCAGCCGTTTTTAA
Enterobacter sp. 638 Ent638_3878 -160 3.7 AGGTTAACGATTGCGT
Erwinia amylovora ATCC 49946 EAM_3301 -164 3.8 GTCCAAAAGATTTCGC
Yersinia pestis KIM y0408 -90 3.8 GCGCAAACGCGTATTA
Serratia proteamaculans 568 Spro_0204 -257 4 GCGTTAACGTTTGCGT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4354 -150 4.1 ACGACAACGTTTGCGC
Edwardsiella tarda EIB202 ETAE_0019 -127 3.8 GCGTTAACGATTGCGT
Proteus mirabilis HI4320 PMI3596 -53 3.8 AATCATACGTTTTATT
Position: -272
Score: 4.1
Sequence: ACGATAACGTTTGCGC
Position: -129
Score: 3.9
Sequence: AGCTAAACGTTTGCTT
Locus tag: SG4112
SG4112 -272 4.1 ACGATAACGTTTGCGC
-129 3.9 AGCTAAACGTTTGCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yjcD
Ortholog function: putative xanthine/uracil permease
Escherichia coli str. K-12 substr. MG1655 b4064 -272 4.1 ACGATAACGTTTGCGC
-130 3.9 AGCTAAACGTTTGCTT
Salmonella typhimurium LT2 STM4268 -271 4.1 ACGATAACGTTTGCGC
-128 3.9 AGCTAAACGTTTGCTT
Citrobacter koseri ATCC BAA-895 CKO_03825 -263 4.1 ACGATAACGTTTGCGC
-121 3.9 AGTTAAACGTTTGCTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04465 -316 4.1 ACGATAACGTTTGCGC
-129 3.9 AGTTAAACGTTTGCTT
Enterobacter sp. 638 Ent638_0269 -278 4.1 ACGATAACGTTTGCGC
-134 3.9 AGCTAAACGTTTGCTT
Erwinia amylovora ATCC 49946 EAM_0319 -146 3.8 ATAAAAACGTTTGCCT
Position: -22
Score: 4.8
Sequence: AAGCAAACGGTGATTT
Locus tag: SG4206
SG4206 -22 4.8 AAGCAAACGGTGATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: purA
Ortholog function: adenylosuccinate synthetase
Escherichia coli str. K-12 substr. MG1655 b4177 -22 4.8 AAGCAAACGGTGATTT
Salmonella typhimurium LT2 STM4366 -22 4.8 AAGCAAACGGTGATTT
Citrobacter koseri ATCC BAA-895 CKO_03657 -22 4.8 AAGCAAACGGTGATTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04576 -22 4.8 AAGCAAACGGTGATTT
Enterobacter sp. 638 Ent638_0360 -21 4.6 AAGCAATCGGTGATTT
Erwinia amylovora ATCC 49946 EAM_0441 -80 4.2 GCGCAATCGTATGCTA
-21 4.6 AAGCAATCGGTGATTT
Serratia proteamaculans 568 Spro_0436 -21 4.6 AAGCAACCGGTGATTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3929 -81 4.2 GCGCAACCGTGTGCTA
Edwardsiella tarda EIB202 ETAE_0358 -81 4.4 GCGCAATCGTGTGCGA
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