Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Crp regulog to Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis

Reference regulog properties
Source regulog: Crp - Enterobacteriales
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator (repressor)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis
Orthologous TF(s) No orthologous TFs found
Regulated genes 43
Built upon 2301 sites [see more]
Predicted regulatory interactions in Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis
Locus tag Position Score Sequence
Position: -84
Score: 3.7
Sequence: ATTTTTGATAATTATAAATTAT
Position: -41
Score: 3.7
Sequence: TTTTATTATATTTTTTAAATTT
Locus tag: WGLp002
WGLp002 -84 3.7 ATTTTTGATAATTATAAATTAT
-41 3.7 TTTTATTATATTTTTTAAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: atpB
Ortholog function: ATP synthase subunit A
Escherichia coli str. K-12 substr. MG1655 b3738 -263 4.8 ATATGTGATCTGAAGCACGCTT
Salmonella typhimurium LT2 STM3871 -262 4.6 ATGTGTGATCTGGTGCACGCTT
-211 4.1 TTTTGTACGATCGTTCACACTT
Citrobacter koseri ATCC BAA-895 CKO_00078 -262 4.7 ATATGTGATCCGAAGCACGCTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04143 -262 4.7 TTATGTGATCTGATGCACGCTT
Enterobacter sp. 638 Ent638_4126 -261 4.8 TTTTGTGATCTCGTGCACGCTT
Erwinia amylovora ATCC 49946 EAM_3480 -264 4.4 ATTTGTGATCGTGGACACGCTT
Yersinia pestis KIM y4141 -263 5.4 TTATGTGATGTATTTCACGTTT
Serratia proteamaculans 568 Spro_0002 -265 4.4 TATTGTGAGCAACTACACGTTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4518 -254 5 TTATGTGAGTCACATCACAGAT
Edwardsiella tarda EIB202 ETAE_3527 -297 3.7 AATCGTGAAAATATTTAAATTA
Proteus mirabilis HI4320 PMI3058 -259 5 TTGTGTGTTCTAGATCACATTA
Photorhabdus luminescens subsp. laumondii TTO1 plu0046 -265 5.7 TTATGTGATTTAAATCACATTT
Position: -7
Score: 3.7
Sequence: ATATTTTATGATAATAAAATTT
Locus tag: WGLp151
WGLp151 -7 3.7 ATATTTTATGATAATAAAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cyoE
Ortholog function: protoheme IX farnesyltransferase
Escherichia coli str. K-12 substr. MG1655 b0428 -245 3.8 ATAATTGTTTTATTTCACATTG
Erwinia amylovora ATCC 49946 EAM_0981 -134 4 AGTTGTGACAGCGTTTGCAAAA
Yersinia pestis KIM y1018 -137 4.5 ATCTGTGACCCCCTTAACATAA
Serratia proteamaculans 568 Spro_1086 -135 4.2 ATCTGTGACCCCCTTAACAGAA
Proteus mirabilis HI4320 PMI0105 -194 3.6 AAATTATAGTTAATTCACAATA
-147 3.6 TTAATTACTTGTGATCACATTA
-141 4.3 ACTTGTGATCACATTAACACAA
Position: -282
Score: 3.5
Sequence: TTGTTTGATTTTTTAAAAAAAA
Position: -175
Score: 4
Sequence: AAATTTTATTTAAATAAAATAT
Locus tag: WGLp177
WGLp177 -282 3.5 TTGTTTGATTTTTTAAAAAAAA
-175 4 AAATTTTATTTAAATAAAATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cspE
Ortholog function: cold shock protein E
Escherichia coli str. K-12 substr. MG1655 b0623 -114 4 TAACGCGACTTTTATCACTTTT
Salmonella typhimurium LT2 STM0629 -114 4.3 TAACGCGATATTTATCACTTTT
Citrobacter koseri ATCC BAA-895 CKO_02534 -21 4.3 TAACGCGATATTTATCACTTTT
Enterobacter sp. 638 Ent638_1159 -114 3.8 TAACGCGACTTTTGTCACTTTT
Erwinia amylovora ATCC 49946 EAM_1116 -113 3.6 AAAAACGATATTTATCACTTTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1294 -113 3.9 TTTAGCGACTTTTATCACTTTT
Position: -60
Score: 3.9
Sequence: AAATTTAATTTTAATAAAATTT
Locus tag: WGLp192
WGLp192 -60 3.9 AAATTTAATTTTAATAAAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yacG
Ortholog function: zinc-binding protein
Erwinia amylovora ATCC 49946 EAM_0725 -75 4.4 TCGTGTGATCTGCGCCACATTA
Yersinia pestis KIM y0755 -259 3.8 AAATGTGATCGGGCGTAAAACA
Serratia proteamaculans 568 Spro_0772 -158 3.8 CAGTGTGACCGCCCGCTCATTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3804 -53 3.9 AAACGTGTTAAGTATCAAATAG
Edwardsiella tarda EIB202 ETAE_0648 -272 4 AAATGTGATCATACAAACGATT
Proteus mirabilis HI4320 PMI2054 -80 3.8 TCTTGTGATAAAAATCAGTTTA
Position: -214
Score: 3.9
Sequence: TATTGTAAATTAATTAAAAATT
Position: -109
Score: 4.3
Sequence: AAATTTAATTTTTATAACATTT
Position: -44
Score: 3.9
Sequence: ATATATTATCTAAATAATATAA
Locus tag: WGLp193
WGLp193 -214 3.9 TATTGTAAATTAATTAAAAATT
-109 4.3 AAATTTAATTTTTATAACATTT
-44 3.9 ATATATTATCTAAATAATATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: coaE
Ortholog function: dephospho-CoA kinase
Erwinia amylovora ATCC 49946 EAM_0727 -75 4.4 TCGTGTGATCTGCGCCACATTA
Yersinia pestis KIM y0757 -259 3.8 AAATGTGATCGGGCGTAAAACA
Serratia proteamaculans 568 Spro_0774 -158 3.8 CAGTGTGACCGCCCGCTCATTT
Edwardsiella tarda EIB202 ETAE_0650 -272 4 AAATGTGATCATACAAACGATT
Proteus mirabilis HI4320 PMI2052 -80 3.8 TCTTGTGATAAAAATCAGTTTA
Position: -93
Score: 3.6
Sequence: TTTTGTATTTTTTATAAAAAAA
Position: 9
Score: 3.6
Sequence: ATTTGTGAAAAAATTAAATATA
Locus tag: WGLp236
WGLp236 -93 3.6 TTTTGTATTTTTTATAAAAAAA
9 3.6 ATTTGTGAAAAAATTAAATATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: aroF
Ortholog function: phospho-2-dehydro-3-deoxyheptonate aldolase
Salmonella typhimurium LT2 STM2670 -71 3.9 TTTTGTGGTATGGTTTAAACAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02923 -159 3.8 TATTGTTATACGCATCGCGCCA
Edwardsiella tarda EIB202 ETAE_2837 -117 3.8 ATGTACGATATTGTTTACATAT
Proteus mirabilis HI4320 PMI0387 -214 4.5 TTATTTTATCTTAGTCACATTT
Photorhabdus luminescens subsp. laumondii TTO1 plu1262 -262 3.6 TGTTTTGATATTGATTTTATTT
Position: -167
Score: 3.6
Sequence: TAATTTAATACAATTAAAACAA
Locus tag: WGLp254
WGLp254 -167 3.6 TAATTTAATACAATTAAAACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: msbA
Ortholog function: fused lipid transporter subunits of ABC superfamily: membrane component/ATP-binding component
Salmonella typhimurium LT2 STM0984 -120 4.1 TTTTTTGCTGCGTCTTACATTT
Proteus mirabilis HI4320 PMI0718 -212 3.6 TTACGTGATCTTTCTCTATTTG
-152 3.6 TTTTTAGAACAACTTCGCAAAA
Photorhabdus luminescens subsp. laumondii TTO1 plu1630 -230 3.7 ATTTGATATCAGTATCGCAATG
-152 4.4 ATTTGCGAAGCTGTTCGCATAT
Position: -334
Score: 3.3
Sequence: AAATTTTATTTAAAAAATAAAA
Position: -292
Score: 3.3
Sequence: AATATTGATTTTAATTTAAATA
Position: -269
Score: 3.4
Sequence: ATTTGTTAATTTAATATAAAAA
Position: -238
Score: 3.4
Sequence: TTTTTTTAAATTGATATCAATA
Position: -232
Score: 3.7
Sequence: TAAATTGATATCAATAAAATTG
Position: -205
Score: 3.3
Sequence: TTTTGAGATAATTATTTTAAAT
Position: -38
Score: 3.4
Sequence: TATTTCGATTGAATTAATATTC
Locus tag: WGLp316
WGLp316 -334 3.3 AAATTTTATTTAAAAAATAAAA
-292 3.3 AATATTGATTTTAATTTAAATA
-269 3.4 ATTTGTTAATTTAATATAAAAA
-238 3.4 TTTTTTTAAATTGATATCAATA
-232 3.7 TAAATTGATATCAATAAAATTG
-205 3.3 TTTTGAGATAATTATTTTAAAT
-38 3.4 TATTTCGATTGAATTAATATTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: metK
Ortholog function: S-adenosylmethionine synthetase (EC 2.5.1.6)
Escherichia coli str. K-12 substr. MG1655 b2942 -200 3.6 GAATGAGACACGATTCAAAAAA
Salmonella typhimurium LT2 STM3090 -200 3.9 CATTGCGACGGCCTTCAAAAAA
Citrobacter koseri ATCC BAA-895 CKO_04317 -199 3.5 CAACGAGAGTTGATTCAAAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03375 -199 4.3 AAATGCGACCGCCATCAAAAAA
Enterobacter sp. 638 Ent638_3346 -199 4.4 TAATGCGAGCGATATCAAAAAA
Proteus mirabilis HI4320 PMI2095 -275 3.5 CACTGTGATTCAGTTTTCACAG
Photorhabdus luminescens subsp. laumondii TTO1 plu3683 -205 3.3 GTTTATACTCGCAATCACATAA
Position: -51
Score: 3.5
Sequence: TAATTTTAATTTTTTAAAATAA
Position: -4
Score: 3.7
Sequence: TAATATGAAAGAAAACAAAATT
Locus tag: WGLp321
WGLp321 -51 3.5 TAATTTTAATTTTTTAAAATAA
-4 3.7 TAATATGAAAGAAAACAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: lpdA
Ortholog function: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4)
Escherichia coli str. K-12 substr. MG1655 b0116 -224 3.3 AATTGTTAACAATTTTGTAAAA
Salmonella typhimurium LT2 STM0154 -153 3.5 GTTTGTGAGGTTATTAGCGAAA
Citrobacter koseri ATCC BAA-895 CKO_03256 -95 3.3 AATTGTTAACAATTTTGTAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00120 -105 3.3 AATTGTTAACAATTTTGTAAAA
Yersinia pestis KIM y0769 -253 3.3 ATTGGTGATCTTGTTATTACTG
Serratia proteamaculans 568 Spro_4009 -246 3.6 TATGGTGATGTAATGAAAAAAG
Proteus mirabilis HI4320 PMI2044 -133 3.4 GGTTGTGAGATCTGTCATGTTA
Photorhabdus luminescens subsp. laumondii TTO1 plu3621 -131 3.9 TGTTGCGAGTTCTGTCACGTTA
Position: 0
Score: 3.1
Sequence: ATGAGTGAAATAATTAAAGTTC
Locus tag: WGLp322
WGLp322 0 3.1 ATGAGTGAAATAATTAAAGTTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: aceF
Ortholog function: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
Escherichia coli str. K-12 substr. MG1655 b0115 -156 3.7 AAACGTTATATATGTCAAGTTG
-131 3.8 AAATGTGCACAGTTTCATGATT
Salmonella typhimurium LT2 STM0153 -157 3.5 AAACATGATTTCTGTAAAATTG
-120 3.2 TTTACTGATTTCAATCAAAACC
-79 3 CTTATTAAGCTTTCTCACGAAA
-54 3.4 TAATGGGACAGGTTCCAGATAA
Citrobacter koseri ATCC BAA-895 CKO_03258 -180 3.2 ATTTGTGCATAGTTACATCTTT
-157 3.1 AAACGTTATTTCTGTAATCTTG
-148 3.3 TTCTGTAATCTTGTTAAAATGT
-120 3.2 TTTACTGATTTCAATCAAAACC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00119 -155 3.2 AAATGTTATTTCTGTAAGGTTG
-118 3.2 TTTACTGATTTCAATCAAAACC
Enterobacter sp. 638 Ent638_0661 -120 3.2 TTTACTGATTTCAATCAAAACC
-77 3.1 TATTGTATTTTCTGGCGAAAAT
-68 3 TTTAGCGATACGAATATGAAAT
Erwinia amylovora ATCC 49946 EAM_0748 -198 3.3 TAAAGCGATCGGATTTAACAAT
Yersinia pestis KIM y0768 -151 4.2 AAATGTGCTGGGTTTCATGATT
-139 3.3 TTTCATGATTTCGGTCAAGGTC
-74 3.4 TTTTGAAATTGGTATTACCAAT
Serratia proteamaculans 568 Spro_4010 -132 3.1 AAATGTGCGGGTAACCTGATTT
-56 3.4 TTTTGAAATTGGTATTACCAAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3788 -120 3.7 ATTGGTGATTTAGCTCAAGGTC
-55 3.4 TTTTGAAATTGGTATTACCAAT
Edwardsiella tarda EIB202 ETAE_0660 -143 3.2 TTTCATGATTTACATCAATAGT
Proteus mirabilis HI4320 PMI2045 -218 3.1 TGTTTTTAATCTTTTCTAATAA
-199 4.4 TAATGCGATCTAGTTATCAAAT
-181 4.2 AAATTTGATGAATTTATCAAAT
-158 3 ATTTGTTAAAATTTGCAGGTTT
-138 3.9 TTTTATGATTTCGCTCAACAAC
-95 3.1 CTTTGTTACTTTATTATCCATT
-89 3.1 TACTTTATTATCCATTACATTA
Position: -319
Score: 3.1
Sequence: AAATTTTATAATATTATTATTT
Position: -308
Score: 3.3
Sequence: TATTATTATTTTTTTATAAAAA
Position: -280
Score: 3.1
Sequence: TTTATTGATGTTTTAAATAGAT
Position: -273
Score: 3.1
Sequence: ATGTTTTAAATAGATAATAGTT
Position: -225
Score: 3.3
Sequence: TAATTTTATTTTATTATAAAAA
Position: -187
Score: 3.6
Sequence: AATTTTAATAAATATTAAAATT
Position: -152
Score: 3.1
Sequence: AATTTTTATTTTTTTTCAAAAT
Position: -151
Score: 3.5
Sequence: ATTTTTATTTTTTTTCAAAATT
Position: -111
Score: 3.4
Sequence: AAATTTAATTTTTATATAAATA
Position: -105
Score: 4
Sequence: AATTTTTATATAAATAAAAAAA
Position: -34
Score: 3.1
Sequence: AATTTCTATTAATTTTAAATAA
Position: 12
Score: 3.6
Sequence: TATTATGATATAGATCCAATCG
Locus tag: WGLp323
WGLp323 -319 3.1 AAATTTTATAATATTATTATTT
-308 3.3 TATTATTATTTTTTTATAAAAA
-280 3.1 TTTATTGATGTTTTAAATAGAT
-273 3.1 ATGTTTTAAATAGATAATAGTT
-225 3.3 TAATTTTATTTTATTATAAAAA
-187 3.6 AATTTTAATAAATATTAAAATT
-152 3.1 AATTTTTATTTTTTTTCAAAAT
-151 3.5 ATTTTTATTTTTTTTCAAAATT
-111 3.4 AAATTTAATTTTTATATAAATA
-105 4 AATTTTTATATAAATAAAAAAA
-34 3.1 AATTTCTATTAATTTTAAATAA
12 3.6 TATTATGATATAGATCCAATCG
Supported by regulated orthologs from reference regulons
Ortholog gene name: aceE
Ortholog function: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
Escherichia coli str. K-12 substr. MG1655 b0114 -156 3.7 AAACGTTATATATGTCAAGTTG
-131 3.8 AAATGTGCACAGTTTCATGATT
Salmonella typhimurium LT2 STM0152 -157 3.5 AAACATGATTTCTGTAAAATTG
-120 3.2 TTTACTGATTTCAATCAAAACC
-79 3 CTTATTAAGCTTTCTCACGAAA
-54 3.4 TAATGGGACAGGTTCCAGATAA
Citrobacter koseri ATCC BAA-895 CKO_03259 -180 3.2 ATTTGTGCATAGTTACATCTTT
-157 3.1 AAACGTTATTTCTGTAATCTTG
-148 3.3 TTCTGTAATCTTGTTAAAATGT
-120 3.2 TTTACTGATTTCAATCAAAACC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00118 -155 3.2 AAATGTTATTTCTGTAAGGTTG
-118 3.2 TTTACTGATTTCAATCAAAACC
Enterobacter sp. 638 Ent638_0660 -120 3.2 TTTACTGATTTCAATCAAAACC
-77 3.1 TATTGTATTTTCTGGCGAAAAT
-68 3 TTTAGCGATACGAATATGAAAT
Erwinia amylovora ATCC 49946 EAM_0747 -198 3.3 TAAAGCGATCGGATTTAACAAT
Yersinia pestis KIM y0767 -151 4.2 AAATGTGCTGGGTTTCATGATT
-139 3.3 TTTCATGATTTCGGTCAAGGTC
-74 3.4 TTTTGAAATTGGTATTACCAAT
Serratia proteamaculans 568 Spro_4011 -132 3.1 AAATGTGCGGGTAACCTGATTT
-56 3.4 TTTTGAAATTGGTATTACCAAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3789 -120 3.7 ATTGGTGATTTAGCTCAAGGTC
-55 3.4 TTTTGAAATTGGTATTACCAAT
Edwardsiella tarda EIB202 ETAE_0659 -143 3.2 TTTCATGATTTACATCAATAGT
Proteus mirabilis HI4320 PMI2046 -218 3.1 TGTTTTTAATCTTTTCTAATAA
-199 4.4 TAATGCGATCTAGTTATCAAAT
-181 4.2 AAATTTGATGAATTTATCAAAT
-158 3 ATTTGTTAAAATTTGCAGGTTT
-138 3.9 TTTTATGATTTCGCTCAACAAC
-95 3.1 CTTTGTTACTTTATTATCCATT
-89 3.1 TACTTTATTATCCATTACATTA
Position: -32
Score: 3.8
Sequence: TTATTTTATATTTATAAAAAAA
Locus tag: WGLp334
WGLp334 -32 3.8 TTATTTTATATTTATAAAAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ydhD
Ortholog function: hypothetical protein
Escherichia coli str. K-12 substr. MG1655 b1654 -132 3.6 ATATTTGAAATGCAACAAATAG
Enterobacter sp. 638 Ent638_1793 -186 3.6 TGAAGCGCTTTTGCTCACACTA
Erwinia amylovora ATCC 49946 EAM_1665 -145 3.9 AAATGTTATTTTGTTATCATCT
Proteus mirabilis HI4320 PMI1394 -292 3.6 TAATGTGCATTTATACACTTAT
Position: -191
Score: 3.7
Sequence: AAATATTATATGTATAACTATT
Position: -7
Score: 3.7
Sequence: GATTGTTATGTTTAACAAAAAA
Locus tag: WGLp355
WGLp355 -191 3.7 AAATATTATATGTATAACTATT
-7 3.7 GATTGTTATGTTTAACAAAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: lpp
Ortholog function: major outer membrane lipoprotein
Escherichia coli str. K-12 substr. MG1655 b1677 -56 3.6 TTGTGTAATACTTGTAACGCTA
Salmonella typhimurium LT2 STM1377 -56 3.6 TTGTGTAATACTTGTAACGCTA
Citrobacter koseri ATCC BAA-895 CKO_01710 -56 3.6 TTGTGTAATACTTGTAACGCTA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02134 -56 3.6 TTGTGTAATACTTGTAACGCTA
Enterobacter sp. 638 Ent638_1767 -56 3.6 TTGTGTAATACTTGTAACGCTA
Erwinia amylovora ATCC 49946 EAM_1656 -56 3.6 TTGTGTAATACTTGTAACGCTA
Serratia proteamaculans 568 Spro_2186 -55 3.6 TTGTGTAATACTTGTAACGCTA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1866 -56 3.6 TTGTGTAATACTTGTAACGCTA
Edwardsiella tarda EIB202 ETAE_1852 -55 3.6 TTGTGTAATACTTGTAACGCTA
Proteus mirabilis HI4320 PMI1409 -200 4.4 TTTTGTGAAATAACACGCATTT
Position: -4
Score: 4.2
Sequence: AAAAATGATATTTTTCAAAAAA
Locus tag: WGLp423
WGLp423 -4 4.2 AAAAATGATATTTTTCAAAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: sdhC
Ortholog function: Succinate dehydrogenase cytochrome b-556 subunit
Enterobacter sp. 638 Ent638_1222 -295 4.2 TATCGTGACTGTGATCACTGTT
Erwinia amylovora ATCC 49946 EAM_1168 -249 4.4 AAGTGTGATTTTTGTCACTGTT
-190 3.6 TAATGAGATTGTGATCCACTTA
Yersinia pestis KIM y3071 -254 4.5 AATCGTGATCCTAATCACTGTT
Serratia proteamaculans 568 Spro_1263 -253 4.3 ATCCGTGATCTAAATCACTGTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1357 -265 4.7 ATTCGTGATCTAAATCACTGTT
Edwardsiella tarda EIB202 ETAE_2588 -261 3.7 ATGCGTGACCGTTGTCACTGTT
Proteus mirabilis HI4320 PMI0565 -264 4.3 AAAAGTGATCCCTCTCACTGTT
Position: -133
Score: 3.4
Sequence: TAATTTGAATTATAACATTTTT
Position: -88
Score: 3.4
Sequence: AAATTTAATAAAATTTATAAAA
Position: -47
Score: 3.8
Sequence: TATTTTGTTGTATTTTAAATAA
Locus tag: WGLp444
WGLp444 -133 3.4 TAATTTGAATTATAACATTTTT
-88 3.4 AAATTTAATAAAATTTATAAAA
-47 3.8 TATTTTGTTGTATTTTAAATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ubiG
Ortholog function: 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64)
Escherichia coli str. K-12 substr. MG1655 b2232 -236 3.8 AACAATGACCGACATCGCATAA
Citrobacter koseri ATCC BAA-895 CKO_00542 -249 3.8 AACAATGACCGACATCGCATAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02641 -236 3.8 AACAATGACCGACATCGCATAA
Proteus mirabilis HI4320 PMI1733 -214 3.5 TGGTGTGATTTCTCTGGCAATG
-89 3.4 TTTCGCGATTCTCTTCGATTTA
Position: -216
Score: 3.4
Sequence: ATTATTAATTTTTATAAAAATT
Position: -198
Score: 3.5
Sequence: AATTTTTAATTTATTAAAATAA
Position: -193
Score: 3.2
Sequence: TTAATTTATTAAAATAAAAATT
Position: -158
Score: 3.4
Sequence: ATTTTTTATATAATTATTATAA
Position: -153
Score: 3.6
Sequence: TTATATAATTATTATAAAATAT
Position: -144
Score: 3.4
Sequence: TATTATAAAATATTTATCATAA
Position: -142
Score: 3.3
Sequence: TTATAAAATATTTATCATAATA
Position: -136
Score: 3.3
Sequence: AATATTTATCATAATAATATAT
Position: -45
Score: 3.2
Sequence: AAATATTATTTCATTTATGTTT
Position: -20
Score: 3.3
Sequence: AATAATTAAAAATATCAAATAT
Locus tag: WGLp486
WGLp486 -216 3.4 ATTATTAATTTTTATAAAAATT
-198 3.5 AATTTTTAATTTATTAAAATAA
-193 3.2 TTAATTTATTAAAATAAAAATT
-158 3.4 ATTTTTTATATAATTATTATAA
-153 3.6 TTATATAATTATTATAAAATAT
-144 3.4 TATTATAAAATATTTATCATAA
-142 3.3 TTATAAAATATTTATCATAATA
-136 3.3 AATATTTATCATAATAATATAT
-45 3.2 AAATATTATTTCATTTATGTTT
-20 3.3 AATAATTAAAAATATCAAATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: serC
Ortholog function: Phosphoserine aminotransferase (EC 2.6.1.52)
Escherichia coli str. K-12 substr. MG1655 b0907 -155 4.8 TTGTGTGATGCAAGCCACATTT
Salmonella typhimurium LT2 STM0977 -142 4.2 TTGTGTGACGCATGCCGCATTT
Citrobacter koseri ATCC BAA-895 CKO_02165 -171 4.6 TTGTGTGACGTAGCGCGCATTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00935 -145 3.7 TTGTGTGACGGCGGCCGCGTTT
Enterobacter sp. 638 Ent638_1427 -119 4.4 TTGTGTGACGGTGGACACATTT
Yersinia pestis KIM y2784 -39 3.3 TATAACGATGGCAATCTCAGTA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2594 -78 3.5 AAGTATGACGGGTATAAAAATG
Proteus mirabilis HI4320 PMI0711 -119 3.5 TATTTTTGTGTGCTACACATAA
Position: -346
Score: 3.7
Sequence: ATATTTTATGAATTTAATATAA
Locus tag: WGLp502
WGLp502 -346 3.7 ATATTTTATGAATTTAATATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: rpiA
Ortholog function: Ribose 5-phosphate isomerase A (EC 5.3.1.6)
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03349 -82 3.9 TTGTGTGATCTGCATCGCAGGG
Enterobacter sp. 638 Ent638_3333 -47 3.8 TAATGTGACACCGGTCACAGGG
Yersinia pestis KIM y3302 -114 4.2 AACTGTGATCTCGCTAGAATTA
Edwardsiella tarda EIB202 ETAE_2950 -276 4 TTTTGTTATGTATAAAACGTTA
Proteus mirabilis HI4320 PMI2032 -96 3.8 TAAAATGTTGTGTCTCAAATTT
Position: -341
Score: 4
Sequence: TTTATTGATATGATTAAAATTA
Position: -336
Score: 3.8
Sequence: TGATATGATTAAAATTAAATTT
Position: -229
Score: 3.7
Sequence: TAATATGATTCATTTACAAAAT
Position: -184
Score: 3.3
Sequence: ATTTTTTAATAATATAAAAATT
Position: -85
Score: 3.3
Sequence: TAATTTAATATAAATTAATAAT
Locus tag: WGLp509
WGLp509 -341 4 TTTATTGATATGATTAAAATTA
-336 3.8 TGATATGATTAAAATTAAATTT
-229 3.7 TAATATGATTCATTTACAAAAT
-184 3.3 ATTTTTTAATAATATAAAAATT
-85 3.3 TAATTTAATATAAATTAATAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hupA
Ortholog function: DNA-binding protein HU-alpha (HU-2)
Escherichia coli str. K-12 substr. MG1655 b4000 -179 3.4 AAACGTGATTTAACGCCTGATT
Citrobacter koseri ATCC BAA-895 CKO_02986 -179 3.4 AAACGTGATTTAACGCCTGATT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04382 -179 3.4 AAACGTGATTTACCGCCTGAAT
Enterobacter sp. 638 Ent638_0213 -179 3.5 AAACGTGATTTAACGCCTGTTT
Yersinia pestis KIM y0499 -181 3.4 AAACGTGATTTAACGCCTGATT
Serratia proteamaculans 568 Spro_0290 -181 3.4 AAACGTGATTTAACGCCTCATT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0238 -197 3.3 AAACGTGATTTAAGGCCTGAAA
Edwardsiella tarda EIB202 ETAE_0183 -182 3.3 AAACGTGATTTAACACCTGATT
Proteus mirabilis HI4320 PMI2771 -183 3.7 AAACGTGATTTAGTGCTTGAAA
Photorhabdus luminescens subsp. laumondii TTO1 plu0492 -179 3.4 AAACGTGATTTAATGCTTTAAA