Propagation of Crp regulog to Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis
| Source regulog: | Crp - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | CRP |
| Regulation mode: | activator (repressor) |
| Biological process: | Carbon catabolism |
| Effector: | Cyclic 3',5'-AMP |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis |
| Orthologous TF(s) | No orthologous TFs found |
| Regulated genes | 43 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -84
Score: 3.7 Sequence: ATTTTTGATAATTATAAATTAT
Position: -41
Score: 3.7 Sequence: TTTTATTATATTTTTTAAATTT
Locus tag: WGLp002
|
||||
| WGLp002 | -84 | 3.7 | ATTTTTGATAATTATAAATTAT | |
| -41 | 3.7 | TTTTATTATATTTTTTAAATTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: atpB | ||||
| Ortholog function: ATP synthase subunit A | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3738 | -263 | 4.8 | ATATGTGATCTGAAGCACGCTT |
| Salmonella typhimurium LT2 | STM3871 | -262 | 4.6 | ATGTGTGATCTGGTGCACGCTT |
| -211 | 4.1 | TTTTGTACGATCGTTCACACTT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_00078 | -262 | 4.7 | ATATGTGATCCGAAGCACGCTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04143 | -262 | 4.7 | TTATGTGATCTGATGCACGCTT |
| Enterobacter sp. 638 | Ent638_4126 | -261 | 4.8 | TTTTGTGATCTCGTGCACGCTT |
| Erwinia amylovora ATCC 49946 | EAM_3480 | -264 | 4.4 | ATTTGTGATCGTGGACACGCTT |
| Yersinia pestis KIM | y4141 | -263 | 5.4 | TTATGTGATGTATTTCACGTTT |
| Serratia proteamaculans 568 | Spro_0002 | -265 | 4.4 | TATTGTGAGCAACTACACGTTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4518 | -254 | 5 | TTATGTGAGTCACATCACAGAT |
| Edwardsiella tarda EIB202 | ETAE_3527 | -297 | 3.7 | AATCGTGAAAATATTTAAATTA |
| Proteus mirabilis HI4320 | PMI3058 | -259 | 5 | TTGTGTGTTCTAGATCACATTA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0046 | -265 | 5.7 | TTATGTGATTTAAATCACATTT |
|
Position: -7
Score: 3.7 Sequence: ATATTTTATGATAATAAAATTT
Locus tag: WGLp151
|
||||
| WGLp151 | -7 | 3.7 | ATATTTTATGATAATAAAATTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cyoE | ||||
| Ortholog function: protoheme IX farnesyltransferase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0428 | -245 | 3.8 | ATAATTGTTTTATTTCACATTG |
| Erwinia amylovora ATCC 49946 | EAM_0981 | -134 | 4 | AGTTGTGACAGCGTTTGCAAAA |
| Yersinia pestis KIM | y1018 | -137 | 4.5 | ATCTGTGACCCCCTTAACATAA |
| Serratia proteamaculans 568 | Spro_1086 | -135 | 4.2 | ATCTGTGACCCCCTTAACAGAA |
| Proteus mirabilis HI4320 | PMI0105 | -194 | 3.6 | AAATTATAGTTAATTCACAATA |
| -147 | 3.6 | TTAATTACTTGTGATCACATTA | ||
| -141 | 4.3 | ACTTGTGATCACATTAACACAA | ||
|
Position: -282
Score: 3.5 Sequence: TTGTTTGATTTTTTAAAAAAAA
Position: -175
Score: 4 Sequence: AAATTTTATTTAAATAAAATAT
Locus tag: WGLp177
|
||||
| WGLp177 | -282 | 3.5 | TTGTTTGATTTTTTAAAAAAAA | |
| -175 | 4 | AAATTTTATTTAAATAAAATAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cspE | ||||
| Ortholog function: cold shock protein E | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0623 | -114 | 4 | TAACGCGACTTTTATCACTTTT |
| Salmonella typhimurium LT2 | STM0629 | -114 | 4.3 | TAACGCGATATTTATCACTTTT |
| Citrobacter koseri ATCC BAA-895 | CKO_02534 | -21 | 4.3 | TAACGCGATATTTATCACTTTT |
| Enterobacter sp. 638 | Ent638_1159 | -114 | 3.8 | TAACGCGACTTTTGTCACTTTT |
| Erwinia amylovora ATCC 49946 | EAM_1116 | -113 | 3.6 | AAAAACGATATTTATCACTTTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1294 | -113 | 3.9 | TTTAGCGACTTTTATCACTTTT |
|
Position: -60
Score: 3.9 Sequence: AAATTTAATTTTAATAAAATTT
Locus tag: WGLp192
|
||||
| WGLp192 | -60 | 3.9 | AAATTTAATTTTAATAAAATTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yacG | ||||
| Ortholog function: zinc-binding protein | ||||
| Erwinia amylovora ATCC 49946 | EAM_0725 | -75 | 4.4 | TCGTGTGATCTGCGCCACATTA |
| Yersinia pestis KIM | y0755 | -259 | 3.8 | AAATGTGATCGGGCGTAAAACA |
| Serratia proteamaculans 568 | Spro_0772 | -158 | 3.8 | CAGTGTGACCGCCCGCTCATTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3804 | -53 | 3.9 | AAACGTGTTAAGTATCAAATAG |
| Edwardsiella tarda EIB202 | ETAE_0648 | -272 | 4 | AAATGTGATCATACAAACGATT |
| Proteus mirabilis HI4320 | PMI2054 | -80 | 3.8 | TCTTGTGATAAAAATCAGTTTA |
|
Position: -214
Score: 3.9 Sequence: TATTGTAAATTAATTAAAAATT
Position: -109
Score: 4.3 Sequence: AAATTTAATTTTTATAACATTT
Position: -44
Score: 3.9 Sequence: ATATATTATCTAAATAATATAA
Locus tag: WGLp193
|
||||
| WGLp193 | -214 | 3.9 | TATTGTAAATTAATTAAAAATT | |
| -109 | 4.3 | AAATTTAATTTTTATAACATTT | ||
| -44 | 3.9 | ATATATTATCTAAATAATATAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: coaE | ||||
| Ortholog function: dephospho-CoA kinase | ||||
| Erwinia amylovora ATCC 49946 | EAM_0727 | -75 | 4.4 | TCGTGTGATCTGCGCCACATTA |
| Yersinia pestis KIM | y0757 | -259 | 3.8 | AAATGTGATCGGGCGTAAAACA |
| Serratia proteamaculans 568 | Spro_0774 | -158 | 3.8 | CAGTGTGACCGCCCGCTCATTT |
| Edwardsiella tarda EIB202 | ETAE_0650 | -272 | 4 | AAATGTGATCATACAAACGATT |
| Proteus mirabilis HI4320 | PMI2052 | -80 | 3.8 | TCTTGTGATAAAAATCAGTTTA |
|
Position: -93
Score: 3.6 Sequence: TTTTGTATTTTTTATAAAAAAA
Position: 9
Score: 3.6 Sequence: ATTTGTGAAAAAATTAAATATA
Locus tag: WGLp236
|
||||
| WGLp236 | -93 | 3.6 | TTTTGTATTTTTTATAAAAAAA | |
| 9 | 3.6 | ATTTGTGAAAAAATTAAATATA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: aroF | ||||
| Ortholog function: phospho-2-dehydro-3-deoxyheptonate aldolase | ||||
| Salmonella typhimurium LT2 | STM2670 | -71 | 3.9 | TTTTGTGGTATGGTTTAAACAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02923 | -159 | 3.8 | TATTGTTATACGCATCGCGCCA |
| Edwardsiella tarda EIB202 | ETAE_2837 | -117 | 3.8 | ATGTACGATATTGTTTACATAT |
| Proteus mirabilis HI4320 | PMI0387 | -214 | 4.5 | TTATTTTATCTTAGTCACATTT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu1262 | -262 | 3.6 | TGTTTTGATATTGATTTTATTT |
|
Position: -167
Score: 3.6 Sequence: TAATTTAATACAATTAAAACAA
Locus tag: WGLp254
|
||||
| WGLp254 | -167 | 3.6 | TAATTTAATACAATTAAAACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: msbA | ||||
| Ortholog function: fused lipid transporter subunits of ABC superfamily: membrane component/ATP-binding component | ||||
| Salmonella typhimurium LT2 | STM0984 | -120 | 4.1 | TTTTTTGCTGCGTCTTACATTT |
| Proteus mirabilis HI4320 | PMI0718 | -212 | 3.6 | TTACGTGATCTTTCTCTATTTG |
| -152 | 3.6 | TTTTTAGAACAACTTCGCAAAA | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu1630 | -230 | 3.7 | ATTTGATATCAGTATCGCAATG |
| -152 | 4.4 | ATTTGCGAAGCTGTTCGCATAT | ||
|
Position: -334
Score: 3.3 Sequence: AAATTTTATTTAAAAAATAAAA
Position: -292
Score: 3.3 Sequence: AATATTGATTTTAATTTAAATA
Position: -269
Score: 3.4 Sequence: ATTTGTTAATTTAATATAAAAA
Position: -238
Score: 3.4 Sequence: TTTTTTTAAATTGATATCAATA
Position: -232
Score: 3.7 Sequence: TAAATTGATATCAATAAAATTG
Position: -205
Score: 3.3 Sequence: TTTTGAGATAATTATTTTAAAT
Position: -38
Score: 3.4 Sequence: TATTTCGATTGAATTAATATTC
Locus tag: WGLp316
|
||||
| WGLp316 | -334 | 3.3 | AAATTTTATTTAAAAAATAAAA | |
| -292 | 3.3 | AATATTGATTTTAATTTAAATA | ||
| -269 | 3.4 | ATTTGTTAATTTAATATAAAAA | ||
| -238 | 3.4 | TTTTTTTAAATTGATATCAATA | ||
| -232 | 3.7 | TAAATTGATATCAATAAAATTG | ||
| -205 | 3.3 | TTTTGAGATAATTATTTTAAAT | ||
| -38 | 3.4 | TATTTCGATTGAATTAATATTC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: metK | ||||
| Ortholog function: S-adenosylmethionine synthetase (EC 2.5.1.6) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2942 | -200 | 3.6 | GAATGAGACACGATTCAAAAAA |
| Salmonella typhimurium LT2 | STM3090 | -200 | 3.9 | CATTGCGACGGCCTTCAAAAAA |
| Citrobacter koseri ATCC BAA-895 | CKO_04317 | -199 | 3.5 | CAACGAGAGTTGATTCAAAAAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03375 | -199 | 4.3 | AAATGCGACCGCCATCAAAAAA |
| Enterobacter sp. 638 | Ent638_3346 | -199 | 4.4 | TAATGCGAGCGATATCAAAAAA |
| Proteus mirabilis HI4320 | PMI2095 | -275 | 3.5 | CACTGTGATTCAGTTTTCACAG |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3683 | -205 | 3.3 | GTTTATACTCGCAATCACATAA |
|
Position: -51
Score: 3.5 Sequence: TAATTTTAATTTTTTAAAATAA
Position: -4
Score: 3.7 Sequence: TAATATGAAAGAAAACAAAATT
Locus tag: WGLp321
|
||||
| WGLp321 | -51 | 3.5 | TAATTTTAATTTTTTAAAATAA | |
| -4 | 3.7 | TAATATGAAAGAAAACAAAATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: lpdA | ||||
| Ortholog function: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0116 | -224 | 3.3 | AATTGTTAACAATTTTGTAAAA |
| Salmonella typhimurium LT2 | STM0154 | -153 | 3.5 | GTTTGTGAGGTTATTAGCGAAA |
| Citrobacter koseri ATCC BAA-895 | CKO_03256 | -95 | 3.3 | AATTGTTAACAATTTTGTAAAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00120 | -105 | 3.3 | AATTGTTAACAATTTTGTAAAA |
| Yersinia pestis KIM | y0769 | -253 | 3.3 | ATTGGTGATCTTGTTATTACTG |
| Serratia proteamaculans 568 | Spro_4009 | -246 | 3.6 | TATGGTGATGTAATGAAAAAAG |
| Proteus mirabilis HI4320 | PMI2044 | -133 | 3.4 | GGTTGTGAGATCTGTCATGTTA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3621 | -131 | 3.9 | TGTTGCGAGTTCTGTCACGTTA |
|
Position: 0
Score: 3.1 Sequence: ATGAGTGAAATAATTAAAGTTC
Locus tag: WGLp322
|
||||
| WGLp322 | 0 | 3.1 | ATGAGTGAAATAATTAAAGTTC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: aceF | ||||
| Ortholog function: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0115 | -156 | 3.7 | AAACGTTATATATGTCAAGTTG |
| -131 | 3.8 | AAATGTGCACAGTTTCATGATT | ||
| Salmonella typhimurium LT2 | STM0153 | -157 | 3.5 | AAACATGATTTCTGTAAAATTG |
| -120 | 3.2 | TTTACTGATTTCAATCAAAACC | ||
| -79 | 3 | CTTATTAAGCTTTCTCACGAAA | ||
| -54 | 3.4 | TAATGGGACAGGTTCCAGATAA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03258 | -180 | 3.2 | ATTTGTGCATAGTTACATCTTT |
| -157 | 3.1 | AAACGTTATTTCTGTAATCTTG | ||
| -148 | 3.3 | TTCTGTAATCTTGTTAAAATGT | ||
| -120 | 3.2 | TTTACTGATTTCAATCAAAACC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00119 | -155 | 3.2 | AAATGTTATTTCTGTAAGGTTG |
| -118 | 3.2 | TTTACTGATTTCAATCAAAACC | ||
| Enterobacter sp. 638 | Ent638_0661 | -120 | 3.2 | TTTACTGATTTCAATCAAAACC |
| -77 | 3.1 | TATTGTATTTTCTGGCGAAAAT | ||
| -68 | 3 | TTTAGCGATACGAATATGAAAT | ||
| Erwinia amylovora ATCC 49946 | EAM_0748 | -198 | 3.3 | TAAAGCGATCGGATTTAACAAT |
| Yersinia pestis KIM | y0768 | -151 | 4.2 | AAATGTGCTGGGTTTCATGATT |
| -139 | 3.3 | TTTCATGATTTCGGTCAAGGTC | ||
| -74 | 3.4 | TTTTGAAATTGGTATTACCAAT | ||
| Serratia proteamaculans 568 | Spro_4010 | -132 | 3.1 | AAATGTGCGGGTAACCTGATTT |
| -56 | 3.4 | TTTTGAAATTGGTATTACCAAT | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3788 | -120 | 3.7 | ATTGGTGATTTAGCTCAAGGTC |
| -55 | 3.4 | TTTTGAAATTGGTATTACCAAT | ||
| Edwardsiella tarda EIB202 | ETAE_0660 | -143 | 3.2 | TTTCATGATTTACATCAATAGT |
| Proteus mirabilis HI4320 | PMI2045 | -218 | 3.1 | TGTTTTTAATCTTTTCTAATAA |
| -199 | 4.4 | TAATGCGATCTAGTTATCAAAT | ||
| -181 | 4.2 | AAATTTGATGAATTTATCAAAT | ||
| -158 | 3 | ATTTGTTAAAATTTGCAGGTTT | ||
| -138 | 3.9 | TTTTATGATTTCGCTCAACAAC | ||
| -95 | 3.1 | CTTTGTTACTTTATTATCCATT | ||
| -89 | 3.1 | TACTTTATTATCCATTACATTA | ||
|
Position: -319
Score: 3.1 Sequence: AAATTTTATAATATTATTATTT
Position: -308
Score: 3.3 Sequence: TATTATTATTTTTTTATAAAAA
Position: -280
Score: 3.1 Sequence: TTTATTGATGTTTTAAATAGAT
Position: -273
Score: 3.1 Sequence: ATGTTTTAAATAGATAATAGTT
Position: -225
Score: 3.3 Sequence: TAATTTTATTTTATTATAAAAA
Position: -187
Score: 3.6 Sequence: AATTTTAATAAATATTAAAATT
Position: -152
Score: 3.1 Sequence: AATTTTTATTTTTTTTCAAAAT
Position: -151
Score: 3.5 Sequence: ATTTTTATTTTTTTTCAAAATT
Position: -111
Score: 3.4 Sequence: AAATTTAATTTTTATATAAATA
Position: -105
Score: 4 Sequence: AATTTTTATATAAATAAAAAAA
Position: -34
Score: 3.1 Sequence: AATTTCTATTAATTTTAAATAA
Position: 12
Score: 3.6 Sequence: TATTATGATATAGATCCAATCG
Locus tag: WGLp323
|
||||
| WGLp323 | -319 | 3.1 | AAATTTTATAATATTATTATTT | |
| -308 | 3.3 | TATTATTATTTTTTTATAAAAA | ||
| -280 | 3.1 | TTTATTGATGTTTTAAATAGAT | ||
| -273 | 3.1 | ATGTTTTAAATAGATAATAGTT | ||
| -225 | 3.3 | TAATTTTATTTTATTATAAAAA | ||
| -187 | 3.6 | AATTTTAATAAATATTAAAATT | ||
| -152 | 3.1 | AATTTTTATTTTTTTTCAAAAT | ||
| -151 | 3.5 | ATTTTTATTTTTTTTCAAAATT | ||
| -111 | 3.4 | AAATTTAATTTTTATATAAATA | ||
| -105 | 4 | AATTTTTATATAAATAAAAAAA | ||
| -34 | 3.1 | AATTTCTATTAATTTTAAATAA | ||
| 12 | 3.6 | TATTATGATATAGATCCAATCG | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: aceE | ||||
| Ortholog function: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0114 | -156 | 3.7 | AAACGTTATATATGTCAAGTTG |
| -131 | 3.8 | AAATGTGCACAGTTTCATGATT | ||
| Salmonella typhimurium LT2 | STM0152 | -157 | 3.5 | AAACATGATTTCTGTAAAATTG |
| -120 | 3.2 | TTTACTGATTTCAATCAAAACC | ||
| -79 | 3 | CTTATTAAGCTTTCTCACGAAA | ||
| -54 | 3.4 | TAATGGGACAGGTTCCAGATAA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03259 | -180 | 3.2 | ATTTGTGCATAGTTACATCTTT |
| -157 | 3.1 | AAACGTTATTTCTGTAATCTTG | ||
| -148 | 3.3 | TTCTGTAATCTTGTTAAAATGT | ||
| -120 | 3.2 | TTTACTGATTTCAATCAAAACC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00118 | -155 | 3.2 | AAATGTTATTTCTGTAAGGTTG |
| -118 | 3.2 | TTTACTGATTTCAATCAAAACC | ||
| Enterobacter sp. 638 | Ent638_0660 | -120 | 3.2 | TTTACTGATTTCAATCAAAACC |
| -77 | 3.1 | TATTGTATTTTCTGGCGAAAAT | ||
| -68 | 3 | TTTAGCGATACGAATATGAAAT | ||
| Erwinia amylovora ATCC 49946 | EAM_0747 | -198 | 3.3 | TAAAGCGATCGGATTTAACAAT |
| Yersinia pestis KIM | y0767 | -151 | 4.2 | AAATGTGCTGGGTTTCATGATT |
| -139 | 3.3 | TTTCATGATTTCGGTCAAGGTC | ||
| -74 | 3.4 | TTTTGAAATTGGTATTACCAAT | ||
| Serratia proteamaculans 568 | Spro_4011 | -132 | 3.1 | AAATGTGCGGGTAACCTGATTT |
| -56 | 3.4 | TTTTGAAATTGGTATTACCAAT | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3789 | -120 | 3.7 | ATTGGTGATTTAGCTCAAGGTC |
| -55 | 3.4 | TTTTGAAATTGGTATTACCAAT | ||
| Edwardsiella tarda EIB202 | ETAE_0659 | -143 | 3.2 | TTTCATGATTTACATCAATAGT |
| Proteus mirabilis HI4320 | PMI2046 | -218 | 3.1 | TGTTTTTAATCTTTTCTAATAA |
| -199 | 4.4 | TAATGCGATCTAGTTATCAAAT | ||
| -181 | 4.2 | AAATTTGATGAATTTATCAAAT | ||
| -158 | 3 | ATTTGTTAAAATTTGCAGGTTT | ||
| -138 | 3.9 | TTTTATGATTTCGCTCAACAAC | ||
| -95 | 3.1 | CTTTGTTACTTTATTATCCATT | ||
| -89 | 3.1 | TACTTTATTATCCATTACATTA | ||
|
Position: -32
Score: 3.8 Sequence: TTATTTTATATTTATAAAAAAA
Locus tag: WGLp334
|
||||
| WGLp334 | -32 | 3.8 | TTATTTTATATTTATAAAAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ydhD | ||||
| Ortholog function: hypothetical protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1654 | -132 | 3.6 | ATATTTGAAATGCAACAAATAG |
| Enterobacter sp. 638 | Ent638_1793 | -186 | 3.6 | TGAAGCGCTTTTGCTCACACTA |
| Erwinia amylovora ATCC 49946 | EAM_1665 | -145 | 3.9 | AAATGTTATTTTGTTATCATCT |
| Proteus mirabilis HI4320 | PMI1394 | -292 | 3.6 | TAATGTGCATTTATACACTTAT |
|
Position: -191
Score: 3.7 Sequence: AAATATTATATGTATAACTATT
Position: -7
Score: 3.7 Sequence: GATTGTTATGTTTAACAAAAAA
Locus tag: WGLp355
|
||||
| WGLp355 | -191 | 3.7 | AAATATTATATGTATAACTATT | |
| -7 | 3.7 | GATTGTTATGTTTAACAAAAAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: lpp | ||||
| Ortholog function: major outer membrane lipoprotein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1677 | -56 | 3.6 | TTGTGTAATACTTGTAACGCTA |
| Salmonella typhimurium LT2 | STM1377 | -56 | 3.6 | TTGTGTAATACTTGTAACGCTA |
| Citrobacter koseri ATCC BAA-895 | CKO_01710 | -56 | 3.6 | TTGTGTAATACTTGTAACGCTA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02134 | -56 | 3.6 | TTGTGTAATACTTGTAACGCTA |
| Enterobacter sp. 638 | Ent638_1767 | -56 | 3.6 | TTGTGTAATACTTGTAACGCTA |
| Erwinia amylovora ATCC 49946 | EAM_1656 | -56 | 3.6 | TTGTGTAATACTTGTAACGCTA |
| Serratia proteamaculans 568 | Spro_2186 | -55 | 3.6 | TTGTGTAATACTTGTAACGCTA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1866 | -56 | 3.6 | TTGTGTAATACTTGTAACGCTA |
| Edwardsiella tarda EIB202 | ETAE_1852 | -55 | 3.6 | TTGTGTAATACTTGTAACGCTA |
| Proteus mirabilis HI4320 | PMI1409 | -200 | 4.4 | TTTTGTGAAATAACACGCATTT |
|
Position: -4
Score: 4.2 Sequence: AAAAATGATATTTTTCAAAAAA
Locus tag: WGLp423
|
||||
| WGLp423 | -4 | 4.2 | AAAAATGATATTTTTCAAAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sdhC | ||||
| Ortholog function: Succinate dehydrogenase cytochrome b-556 subunit | ||||
| Enterobacter sp. 638 | Ent638_1222 | -295 | 4.2 | TATCGTGACTGTGATCACTGTT |
| Erwinia amylovora ATCC 49946 | EAM_1168 | -249 | 4.4 | AAGTGTGATTTTTGTCACTGTT |
| -190 | 3.6 | TAATGAGATTGTGATCCACTTA | ||
| Yersinia pestis KIM | y3071 | -254 | 4.5 | AATCGTGATCCTAATCACTGTT |
| Serratia proteamaculans 568 | Spro_1263 | -253 | 4.3 | ATCCGTGATCTAAATCACTGTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1357 | -265 | 4.7 | ATTCGTGATCTAAATCACTGTT |
| Edwardsiella tarda EIB202 | ETAE_2588 | -261 | 3.7 | ATGCGTGACCGTTGTCACTGTT |
| Proteus mirabilis HI4320 | PMI0565 | -264 | 4.3 | AAAAGTGATCCCTCTCACTGTT |
|
Position: -133
Score: 3.4 Sequence: TAATTTGAATTATAACATTTTT
Position: -88
Score: 3.4 Sequence: AAATTTAATAAAATTTATAAAA
Position: -47
Score: 3.8 Sequence: TATTTTGTTGTATTTTAAATAA
Locus tag: WGLp444
|
||||
| WGLp444 | -133 | 3.4 | TAATTTGAATTATAACATTTTT | |
| -88 | 3.4 | AAATTTAATAAAATTTATAAAA | ||
| -47 | 3.8 | TATTTTGTTGTATTTTAAATAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ubiG | ||||
| Ortholog function: 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2232 | -236 | 3.8 | AACAATGACCGACATCGCATAA |
| Citrobacter koseri ATCC BAA-895 | CKO_00542 | -249 | 3.8 | AACAATGACCGACATCGCATAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02641 | -236 | 3.8 | AACAATGACCGACATCGCATAA |
| Proteus mirabilis HI4320 | PMI1733 | -214 | 3.5 | TGGTGTGATTTCTCTGGCAATG |
| -89 | 3.4 | TTTCGCGATTCTCTTCGATTTA | ||
|
Position: -216
Score: 3.4 Sequence: ATTATTAATTTTTATAAAAATT
Position: -198
Score: 3.5 Sequence: AATTTTTAATTTATTAAAATAA
Position: -193
Score: 3.2 Sequence: TTAATTTATTAAAATAAAAATT
Position: -158
Score: 3.4 Sequence: ATTTTTTATATAATTATTATAA
Position: -153
Score: 3.6 Sequence: TTATATAATTATTATAAAATAT
Position: -144
Score: 3.4 Sequence: TATTATAAAATATTTATCATAA
Position: -142
Score: 3.3 Sequence: TTATAAAATATTTATCATAATA
Position: -136
Score: 3.3 Sequence: AATATTTATCATAATAATATAT
Position: -45
Score: 3.2 Sequence: AAATATTATTTCATTTATGTTT
Position: -20
Score: 3.3 Sequence: AATAATTAAAAATATCAAATAT
Locus tag: WGLp486
|
||||
| WGLp486 | -216 | 3.4 | ATTATTAATTTTTATAAAAATT | |
| -198 | 3.5 | AATTTTTAATTTATTAAAATAA | ||
| -193 | 3.2 | TTAATTTATTAAAATAAAAATT | ||
| -158 | 3.4 | ATTTTTTATATAATTATTATAA | ||
| -153 | 3.6 | TTATATAATTATTATAAAATAT | ||
| -144 | 3.4 | TATTATAAAATATTTATCATAA | ||
| -142 | 3.3 | TTATAAAATATTTATCATAATA | ||
| -136 | 3.3 | AATATTTATCATAATAATATAT | ||
| -45 | 3.2 | AAATATTATTTCATTTATGTTT | ||
| -20 | 3.3 | AATAATTAAAAATATCAAATAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: serC | ||||
| Ortholog function: Phosphoserine aminotransferase (EC 2.6.1.52) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0907 | -155 | 4.8 | TTGTGTGATGCAAGCCACATTT |
| Salmonella typhimurium LT2 | STM0977 | -142 | 4.2 | TTGTGTGACGCATGCCGCATTT |
| Citrobacter koseri ATCC BAA-895 | CKO_02165 | -171 | 4.6 | TTGTGTGACGTAGCGCGCATTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00935 | -145 | 3.7 | TTGTGTGACGGCGGCCGCGTTT |
| Enterobacter sp. 638 | Ent638_1427 | -119 | 4.4 | TTGTGTGACGGTGGACACATTT |
| Yersinia pestis KIM | y2784 | -39 | 3.3 | TATAACGATGGCAATCTCAGTA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2594 | -78 | 3.5 | AAGTATGACGGGTATAAAAATG |
| Proteus mirabilis HI4320 | PMI0711 | -119 | 3.5 | TATTTTTGTGTGCTACACATAA |
|
Position: -346
Score: 3.7 Sequence: ATATTTTATGAATTTAATATAA
Locus tag: WGLp502
|
||||
| WGLp502 | -346 | 3.7 | ATATTTTATGAATTTAATATAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rpiA | ||||
| Ortholog function: Ribose 5-phosphate isomerase A (EC 5.3.1.6) | ||||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03349 | -82 | 3.9 | TTGTGTGATCTGCATCGCAGGG |
| Enterobacter sp. 638 | Ent638_3333 | -47 | 3.8 | TAATGTGACACCGGTCACAGGG |
| Yersinia pestis KIM | y3302 | -114 | 4.2 | AACTGTGATCTCGCTAGAATTA |
| Edwardsiella tarda EIB202 | ETAE_2950 | -276 | 4 | TTTTGTTATGTATAAAACGTTA |
| Proteus mirabilis HI4320 | PMI2032 | -96 | 3.8 | TAAAATGTTGTGTCTCAAATTT |
|
Position: -341
Score: 4 Sequence: TTTATTGATATGATTAAAATTA
Position: -336
Score: 3.8 Sequence: TGATATGATTAAAATTAAATTT
Position: -229
Score: 3.7 Sequence: TAATATGATTCATTTACAAAAT
Position: -184
Score: 3.3 Sequence: ATTTTTTAATAATATAAAAATT
Position: -85
Score: 3.3 Sequence: TAATTTAATATAAATTAATAAT
Locus tag: WGLp509
|
||||
| WGLp509 | -341 | 4 | TTTATTGATATGATTAAAATTA | |
| -336 | 3.8 | TGATATGATTAAAATTAAATTT | ||
| -229 | 3.7 | TAATATGATTCATTTACAAAAT | ||
| -184 | 3.3 | ATTTTTTAATAATATAAAAATT | ||
| -85 | 3.3 | TAATTTAATATAAATTAATAAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hupA | ||||
| Ortholog function: DNA-binding protein HU-alpha (HU-2) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4000 | -179 | 3.4 | AAACGTGATTTAACGCCTGATT |
| Citrobacter koseri ATCC BAA-895 | CKO_02986 | -179 | 3.4 | AAACGTGATTTAACGCCTGATT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04382 | -179 | 3.4 | AAACGTGATTTACCGCCTGAAT |
| Enterobacter sp. 638 | Ent638_0213 | -179 | 3.5 | AAACGTGATTTAACGCCTGTTT |
| Yersinia pestis KIM | y0499 | -181 | 3.4 | AAACGTGATTTAACGCCTGATT |
| Serratia proteamaculans 568 | Spro_0290 | -181 | 3.4 | AAACGTGATTTAACGCCTCATT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0238 | -197 | 3.3 | AAACGTGATTTAAGGCCTGAAA |
| Edwardsiella tarda EIB202 | ETAE_0183 | -182 | 3.3 | AAACGTGATTTAACACCTGATT |
| Proteus mirabilis HI4320 | PMI2771 | -183 | 3.7 | AAACGTGATTTAGTGCTTGAAA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0492 | -179 | 3.4 | AAACGTGATTTAATGCTTTAAA |