Propagation of Fur regulog to Yersinia pestis Z176003
| Source regulog: | Fur - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | FUR |
| Regulation mode: | repressor (activator) |
| Biological process: | Iron homeostasis |
| Effector: | Iron ion, (Fe2+) |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Yersinia pestis Z176003 |
| Orthologous TF(s) | YPZ3_2327 |
| Regulated genes | 31 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -331
Score: 4.1 Sequence: TGAAATAAAACTCATTCTT
Position: -325
Score: 4 Sequence: AAAACTCATTCTTATTTAC
Locus tag: YPZ3_0177
|
||||
| YPZ3_0177 | -331 | 4.1 | TGAAATAAAACTCATTCTT | |
| -325 | 4 | AAAACTCATTCTTATTTAC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: bfr | ||||
| Ortholog function: bacterioferrin | ||||
| Yersinia pestis KIM | y3988 | -332 | 3.9 | tgaAATaAaAcTCATTcTt |
| -326 | 3.6 | aAaAcTcATtcTtATTtaC | ||
|
Position: -48
Score: 4.6 Sequence: GCTTATGATTATCATTTAA
Locus tag: YPZ3_0247
|
||||
| YPZ3_0247 | -48 | 4.6 | GCTTATGATTATCATTTAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hemN1 | ||||
| Ortholog function: coproporphyrinogen III oxidase, iron utilization | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_02656 | -45 | 4.2 | GCGAATGATAATGATGATC |
| -39 | 4.7 | GATAATGATGATCATTTAC | ||
| Yersinia pestis KIM | y0547 | -54 | 4.1 | TCGAATGCTTATGATTATC |
| -48 | 4.4 | GCTTATGATTATCATTTAA | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3009 | -55 | 4.2 | CCAAATAAAAATAATTATC |
| -49 | 4.6 | AAAAATAATTATCATTTAA | ||
| Edwardsiella tarda EIB202 | ETAE_1793 | -59 | 4.4 | TCGAATGATAACTATTATC |
| -53 | 4.4 | GATAACTATTATCATTCAA | ||
|
Position: 2
Score: 5 Sequence: GATATTGGTTATGATTATC
Position: 8
Score: 5.4 Sequence: GGTTATGATTATCATTATC
Locus tag: YPZ3_0414
|
||||
| YPZ3_0414 | 2 | 5 | GATATTGGTTATGATTATC | |
| 8 | 5.4 | GGTTATGATTATCATTATC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yjjZ | ||||
| Ortholog function: putative membrane protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4567 | -60 | 4.4 | GCAAATGATAAAAATTATC |
| -37 | 5.2 | GATATTGGTTATCATTATC | ||
| Salmonella typhimurium LT2 | STM4552 | -37 | 5.2 | GATATTGGTTATCATTATC |
| -31 | 4.2 | GGTTATCATTATCAATTCC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03427 | 2 | 4.9 | GCTATTGGTTATCATTATC |
| 8 | 4.1 | GGTTATCATTATCGGTATC | ||
| Enterobacter sp. 638 | Ent638_0529 | -37 | 5.2 | GATATTGGTTATCATTATC |
| -31 | 4 | GGTTATCATTATCATATTG | ||
| Erwinia amylovora ATCC 49946 | EAM_0565 | -70 | 4.3 | CAAAGTGATAATGATTAAC |
| -64 | 4.3 | GATAATGATTAACATATGC | ||
| -47 | 4.9 | GCTATTGGTAATCATTATC | ||
| -41 | 4.8 | GGTAATCATTATCATTTAT | ||
| Yersinia pestis KIM | y3754 | -4 | 4.9 | GATATTGGTTATGATTATC |
| 2 | 5.2 | GGTTATGATTATCATTATC | ||
| Serratia proteamaculans 568 | Spro_0646 | -39 | 4.7 | GATATTAGTTCTCATTATC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0738 | -89 | 5 | GATATTAGTTATCATTATC |
| -83 | 4.5 | AGTTATCATTATCATTTTT | ||
| Proteus mirabilis HI4320 | PMI2497 | -27 | 5.3 | AATAATGAAAATCATTATC |
| -21 | 5.2 | GAAAATCATTATCATTAAC | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4253 | -92 | 5.2 | GATATTGGTAATCATTATC |
| -86 | 4.7 | GGTAATCATTATCATTTGT | ||
|
Position: -95
Score: 4.9 Sequence: ACTAATGATAATTACTATC
Locus tag: YPZ3_0638
|
||||
| YPZ3_0638 | -95 | 4.9 | ACTAATGATAATTACTATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: exbB | ||||
| Ortholog function: TonB-dependent siderophore transporter component ExbB | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3006 | -82 | 4.1 | AGTAATGAGAACGACTATC |
| Salmonella typhimurium LT2 | STM3159 | -82 | 4.1 | AGTAATGAGAACGACTATC |
| Citrobacter koseri ATCC BAA-895 | CKO_04401 | -97 | 4.1 | AGTAATGAGAACGACTATC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03426 | -97 | 4.3 | ACTAATGAGAACCACTATC |
| Enterobacter sp. 638 | Ent638_3417 | -97 | 4.3 | ACTAATGAGAACCACTATC |
| Yersinia pestis KIM | y3495 | -71 | 4.8 | ACTAATGATAATTACTATC |
| Serratia proteamaculans 568 | Spro_4211 | -94 | 4.4 | AATAATGAGAACTACTATC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0358 | -206 | 4.3 | AATAATGAGAACGACTATC |
| Proteus mirabilis HI4320 | PMI0029 | -170 | 4.8 | AGTAATGATAATTACTATC |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3941 | -98 | 5.1 | AATAATGATAATTACTATC |
|
Position: -187
Score: 5 Sequence: GAAAATGATAATCGTTTGC
Locus tag: YPZ3_0715
|
||||
| YPZ3_0715 | -187 | 5 | GAAAATGATAATCGTTTGC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: y3404 | ||||
| Ortholog function: TonB-dependent receptor | ||||
| Yersinia pestis KIM | y3404 | -187 | 4.9 | GAAAATGATAATCGTTTGC |
|
Position: -63
Score: 5 Sequence: GATAATGATAACCACTATT
Locus tag: YPZ3_0749
|
||||
| YPZ3_0749 | -63 | 5 | GATAATGATAACCACTATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: iucA2 | ||||
| Ortholog function: aerobactin synthetase (subunit alpha) | ||||
| Yersinia pestis KIM | y3380 | -63 | 4.8 | GATAATGATAACCACTATT |
| Yersinia pestis KIM | y3381 | -63 | 4.8 | GATAATGATAACCACTATT |
| Serratia proteamaculans 568 | Spro_0922 | -63 | 4.2 | GATAACAATAAATATTATT |
| -45 | 4.1 | TGATATAAGAATCATTCTC | ||
|
Position: -50
Score: 4.3 Sequence: ACAAACGATTTTGATTATC
Position: -44
Score: 4.9 Sequence: GATTTTGATTATCATTCGC
Locus tag: YPZ3_0773
|
||||
| YPZ3_0773 | -50 | 4.3 | ACAAACGATTTTGATTATC | |
| -44 | 4.9 | GATTTTGATTATCATTCGC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: Spro_1015 | ||||
| Ortholog function: iron(III) ABC transporter, periplasmic protein | ||||
| Yersinia pestis KIM | y3342 | -41 | 4.2 | ACAAACGATTTTGATTATC |
| -35 | 4.6 | GATTTTGATTATCATTCGC | ||
| Serratia proteamaculans 568 | Spro_1015 | -52 | 4.3 | GCTAATGAGAGTGATTATC |
|
Position: -187
Score: 5.4 Sequence: TATAATGATAATAATTATC
Position: -181
Score: 4.7 Sequence: GATAATAATTATCATTGAA
Locus tag: YPZ3_1028
|
||||
| YPZ3_1028 | -187 | 5.4 | TATAATGATAATAATTATC | |
| -181 | 4.7 | GATAATAATTATCATTGAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gpmA | ||||
| Ortholog function: phosphoglyceromutase 1 | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0755 | -47 | 5 | TATAATGAGAATTATTATC |
| -41 | 4.7 | GAGAATTATTATCATTAAA | ||
| Salmonella typhimurium LT2 | STM0772 | -47 | 5 | TATAATGAGAATTATTATC |
| -41 | 4.5 | GAGAATTATTATCATTACA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_02381 | -46 | 5 | TATAATGAGAATTATTATC |
| -40 | 4.5 | GAGAATTATTATCATTCAA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00768 | -96 | 4.6 | TATAATGAGAATAGTTATC |
| Enterobacter sp. 638 | Ent638_1246 | -164 | 4.7 | TATAATGAGAATTGTTATC |
| -158 | 4.1 | GAGAATTGTTATCATTCAA | ||
| Yersinia pestis KIM | y3048 | -103 | 5.3 | TATAATGATAATAATTATC |
| -97 | 4.6 | GATAATAATTATCATTGAA | ||
| Serratia proteamaculans 568 | Spro_1288 | -51 | 4.9 | TATAATGATTTTCGTTATC |
| Edwardsiella tarda EIB202 | ETAE_2569 | -49 | 4.6 | CATGATGATAATAATTATC |
| -43 | 5.3 | GATAATAATTATCATTATA | ||
|
Position: -69
Score: 4.4 Sequence: CTTATTGATAAGTATTATC
Position: -63
Score: 4.7 Sequence: GATAAGTATTATCATTTGC
Locus tag: YPZ3_1198
|
||||
| YPZ3_1198 | -69 | 4.4 | CTTATTGATAAGTATTATC | |
| -63 | 4.7 | GATAAGTATTATCATTTGC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yiuA | ||||
| Ortholog function: siderophore ABC transporter, substrate binding periplasmic protein | ||||
| Yersinia pestis KIM | y2875 | -45 | 4.3 | CTTATTGATAAGTATTATC |
| -39 | 4.5 | GATAAGTATTATCATTTGC | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2853 | -78 | 4.3 | CATATTGATAAGTATTCTC |
| -72 | 4 | GATAAGTATTCTCATTTGT | ||
|
Position: -67
Score: 5 Sequence: GCTATTGATAATCACTATC
Position: -61
Score: 4.6 Sequence: GATAATCACTATCATTCTG
Locus tag: YPZ3_1393
|
||||
| YPZ3_1393 | -67 | 5 | GCTATTGATAATCACTATC | |
| -61 | 4.6 | GATAATCACTATCATTCTG | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fhuF | ||||
| Ortholog function: ferric iron reductase involved in ferric hydroximate transport | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4367 | -122 | 5.1 | GATAATGATAACCAATATC |
| -99 | 4.5 | GATAATTTTTATCATTTGC | ||
| -34 | 4 | AGCAATCATTATCATTTAG | ||
| Salmonella typhimurium LT2 | STM4550 | -238 | 4 | GGAATTGATAATGATAACC |
| -232 | 5.1 | GATAATGATAACCAATATC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03429 | -234 | 4.8 | GATAATGATAACCAATAGC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04821 | -44 | 4.5 | AATATCAGTAATCATTATC |
| -38 | 4.4 | AGTAATCATTATCATTTAG | ||
| Enterobacter sp. 638 | Ent638_0527 | -237 | 5.1 | GATAATGATAACCAATATC |
| Yersinia pestis KIM | y2642 | -67 | 4.9 | GCTATTGATAATCACTATC |
| -61 | 4.4 | GATAATCACTATCATTCTG | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4627 | -100 | 4.3 | GACAATGATAATAATAATA |
| -94 | 5.3 | GATAATAATAATAATTATC | ||
| -88 | 4.9 | AATAATAATTATCATAATT | ||
| -82 | 4.1 | AATTATCATAATTATATTT | ||
|
Position: -205
Score: 4.9 Sequence: ATAAATAATAATCATTTGC
Locus tag: YPZ3_1403
|
||||
| YPZ3_1403 | -205 | 4.9 | ATAAATAATAATCATTTGC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: plu4621 | ||||
| Ortholog function: unknown | ||||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4621 | -196 | 4.6 | GTTAATGATAATAATTTGT |
| -190 | 4.2 | GATAATAATTTGTATTAAT | ||
|
Position: -48
Score: 4.2 Sequence: GCTAATGGTATTGATAATC
Position: -42
Score: 5.4 Sequence: GGTATTGATAATCATTTTC
Position: -36
Score: 4.9 Sequence: GATAATCATTTTCATTTGT
Locus tag: YPZ3_1453
|
||||
| YPZ3_1453 | -48 | 4.2 | GCTAATGGTATTGATAATC | |
| -42 | 5.4 | GGTATTGATAATCATTTTC | ||
| -36 | 4.9 | GATAATCATTTTCATTTGT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sitA | ||||
| Ortholog function: iron ABC transporter, periplasmic substrate-binding protein | ||||
| Salmonella typhimurium LT2 | STM2861 | -99 | 4.5 | GCAAATAAGAATTATTTTC |
| -93 | 4.2 | AAGAATTATTTTCATTTAT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_04090 | -84 | 4.5 | GTAAATAAGAATTATTTTC |
| -78 | 4.2 | AAGAATTATTTTCATTTAT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_00940 | -111 | 4.1 | GATAAAGATAATTTTTCTC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03078 | -99 | 4.5 | GCAAATAAGAATTATTTTC |
| -93 | 4.2 | AAGAATTATTTTCATTTAT | ||
| Enterobacter sp. 638 | Ent638_1111 | -98 | 4.9 | TTTAATGATAATTATTTTC |
| -92 | 4.5 | GATAATTATTTTCATTTAA | ||
| Yersinia pestis KIM | y1897 | -39 | 5.2 | GGTATTGATAATCATTTTC |
| -33 | 4.7 | GATAATCATTTTCATTTGT | ||
| Serratia proteamaculans 568 | Spro_2133 | -41 | 5.4 | GATATTGATAATCATTTTC |
| -35 | 4.6 | GATAATCATTTTCATTTGA | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2392 | -53 | 5.1 | GATATTGATAATTATTCTC |
| Proteus mirabilis HI4320 | PMI1027 | -63 | 4.2 | TGAAATGATATTGATAATC |
| -57 | 5.5 | GATATTGATAATCATTATC | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2672 | -49 | 5.2 | GATATTGATAATCGTTATC |
| -43 | 4.5 | GATAATCGTTATCATATAC | ||
|
Position: -156
Score: 4.6 Sequence: TGAAGTGATAATTATTATC
Position: -150
Score: 4.9 Sequence: GATAATTATTATCACTACC
Locus tag: YPZ3_1482
|
||||
| YPZ3_1482 | -156 | 4.6 | TGAAGTGATAATTATTATC | |
| -150 | 4.9 | GATAATTATTATCACTACC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sufA | ||||
| Ortholog function: scaffold protein for iron-sulfur cluster assembly | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1684 | -65 | 4.4 | TGAACTGATAATCATTATC |
| -59 | 5.1 | GATAATCATTATCACTAAC | ||
| Salmonella typhimurium LT2 | STM1369 | -66 | 4.7 | TGAAGTGATAATCATTATC |
| -60 | 5.1 | GATAATCATTATCACTAAC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_01717 | -66 | 4.7 | TGAAGTGATAATCATTATC |
| -60 | 5.1 | GATAATCATTATCACTAAC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02141 | -66 | 4.7 | TGAAGTGATAATCATTATC |
| -60 | 5.1 | GATAATCATTATCACTAAC | ||
| Enterobacter sp. 638 | Ent638_1760 | -67 | 4.4 | TGAAGTGATAATCGTTATC |
| -61 | 4.7 | GATAATCGTTATCACTAAC | ||
| Yersinia pestis KIM | y1934 | -129 | 4.5 | TGAAGTGATAATTATTATC |
| -123 | 4.8 | GATAATTATTATCACTACC | ||
| Serratia proteamaculans 568 | Spro_2179 | -77 | 4.4 | TGAAGTGATAATCGTTATC |
| -71 | 4.7 | GATAATCGTTATCACTAAC | ||
| Proteus mirabilis HI4320 | PMI1416 | -66 | 4.4 | GATAAGGGTTATCATTACC |
| -60 | 4 | GGTTATCATTACCATTAGA | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2622 | -87 | 4.4 | GATAAAGGTTATCATTACC |
| -81 | 4.3 | GGTTATCATTACCATTATA | ||
|
Position: -339
Score: 5.2 Sequence: GATAATGACAATCATTCTC
Locus tag: YPZ3_1666
|
||||
| YPZ3_1666 | -339 | 5.2 | GATAATGACAATCATTCTC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: adhE | ||||
| Ortholog function: iron-containing aldehyde-alcohol dehydrogenase | ||||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02199 | -332 | 4 | TTTAATGCTAATCGTTTTT |
| -326 | 3.2 | GCTAATCGTTTTTTTAATT | ||
| Yersinia pestis KIM | y2023 | -339 | 5 | GATAATGACAATCATTCTC |
| -333 | 3.7 | GAcAATcATtcTCAaaAaa | ||
| Serratia proteamaculans 568 | Spro_2704 | -330 | 3.9 | GTTATCAAGAATGATTCTC |
| -324 | 4.2 | AAGAATGATTCTCAAAAAC | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2326 | -368 | 4.5 | CCTAATGATATTGATTATC |
| -362 | 5.2 | GATATTGATTATCAATATC | ||
| Edwardsiella tarda EIB202 | ETAE_1508 | -317 | 4 | aAagATGAgAtTCATTcTC |
| -311 | 4.3 | GAgAtTcATtcTCATTAaa | ||
| Proteus mirabilis HI4320 | PMI1486 | -300 | 4.5 | GTAATTAATTATCATTACC |
| -294 | 4 | AATTATCATTACCATTTAA | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2496 | -191 | 3.9 | ccaAtcaATAATaATTATC |
| -185 | 4.4 | AATAATAATTATCACTGAC | ||
|
Position: -93
Score: 4.4 Sequence: CAGAATGATAATCACAATC
Position: -87
Score: 4.3 Sequence: GATAATCACAATCGTTTTA
Locus tag: YPZ3_1875
|
||||
| YPZ3_1875 | -93 | 4.4 | CAGAATGATAATCACAATC | |
| -87 | 4.3 | GATAATCACAATCGTTTTA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yijD | ||||
| Ortholog function: iron permease FTR1 | ||||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01045 | -76 | 5 | TGTAATGATAATCACTATC |
| -70 | 4.2 | GATAATCACTATCATAAAT | ||
| Enterobacter sp. 638 | Ent638_1545 | -76 | 4.9 | CGTAATGATAATCACTATC |
| Erwinia amylovora ATCC 49946 | EAM_2059 | -80 | 4.6 | GATAATGATAATCCCTATC |
| Yersinia pestis KIM | y2452 | -84 | 4.4 | CAGAATGATAATCACAATC |
| -78 | 4.3 | GATAATCACAATCGTTTTA | ||
| Serratia proteamaculans 568 | Spro_2929 | -109 | 4.8 | CAGAATGATAATCACTATC |
|
Position: -302
Score: 3.7 Sequence: GTGGATGACTATCATTAAA
Position: -289
Score: 4 Sequence: ATTAAACAGACTCATTCTC
Position: -237
Score: 4.2 Sequence: ACCAATAGGAATCATTATC
Position: -231
Score: 4.1 Sequence: AGGAATCATTATCTTTAGT
Position: -204
Score: 4.5 Sequence: AATAATGTGAATGATTATC
Position: -198
Score: 4.2 Sequence: GTGAATGATTATCATGATG
Position: -181
Score: 3.4 Sequence: TGCTTTGGTATTTATTTTC
Position: -175
Score: 4.2 Sequence: GGTATTTATTTTCATTTAA
Locus tag: YPZ3_1937
|
||||
| YPZ3_1937 | -302 | 3.7 | GTGGATGACTATCATTAAA | |
| -289 | 4 | ATTAAACAGACTCATTCTC | ||
| -237 | 4.2 | ACCAATAGGAATCATTATC | ||
| -231 | 4.1 | AGGAATCATTATCTTTAGT | ||
| -204 | 4.5 | AATAATGTGAATGATTATC | ||
| -198 | 4.2 | GTGAATGATTATCATGATG | ||
| -181 | 3.4 | TGCTTTGGTATTTATTTTC | ||
| -175 | 4.2 | GGTATTTATTTTCATTTAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ftnA | ||||
| Ortholog function: ferritin | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1905 | -127 | 3.4 | GgTAATGcgttTtATTccC |
| -121 | 3 | GcgttTtATtccCATTcgt | ||
| Salmonella typhimurium LT2 | STM1935 | -100 | 4 | AATAATTAAATTTAATATT |
| Citrobacter koseri ATCC BAA-895 | CKO_01042 | -97 | 4.3 | AATAATTAAATTTATTATT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02402 | -161 | 4 | ATAAATTAAAAGCATTCTC |
| -155 | 3.8 | TAAAAGCATTCTCATTTAT | ||
| Enterobacter sp. 638 | Ent638_2486 | -103 | 3.7 | TATTTTAATAAATAATATC |
| -97 | 3.6 | AATAAATAATATCTTTATT | ||
| Erwinia amylovora ATCC 49946 | EAM_2940 | -131 | 4.4 | TGGAATGATTATCAATTAC |
| Yersinia pestis KIM | y2524 | -93 | 4.4 | AATAATGTGAATGATTATC |
| -87 | 4.1 | GTGAATGATTATCATGATG | ||
| Serratia proteamaculans 568 | Spro_1942 | -174 | 4.5 | GAAAATAGTTATCATAATT |
| -168 | 4 | AGTTATCATAATTATTTAA | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2473 | -158 | 4.6 | TTAAATGATAATGAATATC |
| -152 | 4.8 | GATAATGAATATCAATAGC | ||
| Proteus mirabilis HI4320 | PMI1007 | -184 | 4.7 | GTTAATGATAATCAATTCC |
| -178 | 4.1 | GATAATCAATTCCATTAAT | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2689 | -147 | 4.4 | TTAAATGAGATTCATTTTC |
| -141 | 4.4 | GAGATTCATTTTCATTTTT | ||
|
Position: -108
Score: 5.1 Sequence: AACAATGATAATCATTTTT
Position: -102
Score: 4.9 Sequence: GATAATCATTTTTATTACC
Locus tag: YPZ3_2605
|
||||
| YPZ3_2605 | -108 | 5.1 | AACAATGATAATCATTTTT | |
| -102 | 4.9 | GATAATCATTTTTATTACC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sfuA | ||||
| Ortholog function: iron(III) ABC transporter, periplasmic protein | ||||
| Yersinia pestis KIM | y1526 | -108 | 4.8 | AACAATGATAATCATTTTT |
| -102 | 4.7 | GATAATCATTTTTATTACC | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3137 | -169 | 4.2 | CGAAATAATAATAACTATC |
| -163 | 4.7 | AATAATAACTATCATTATT | ||
| -157 | 4.4 | AACTATCATTATTATTATC | ||
|
Position: -72
Score: 4.7 Sequence: GATAATTATTCTCATTTAA
Locus tag: YPZ3_2627
|
||||
| YPZ3_2627 | -72 | 4.7 | GATAATTATTCTCATTTAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: mntH | ||||
| Ortholog function: Mn2+/Fe2+ transporter, NRAMP family | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2392 | -68 | 4.7 | GAATTTGATAATCATTCTC |
| -62 | 4.2 | GATAATCATTCTCGTTTGG | ||
| Salmonella typhimurium LT2 | STM2408 | -68 | 4.5 | GCACTTGATAATCATTATC |
| -62 | 4.8 | GATAATCATTATCAATAAA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_00404 | -50 | 4.3 | GCACTTGATAATCATTCTC |
| -44 | 4.5 | GATAATCATTCTCAATAAA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02743 | -68 | 4.3 | GAACTTGATAATCATTCGC |
| -62 | 4.3 | GATAATCATTCGCATTTTG | ||
| Enterobacter sp. 638 | Ent638_2926 | -67 | 4.8 | GATCTTGATAATCATTCTC |
| -61 | 4.8 | GATAATCATTCTCATTTTG | ||
| Yersinia pestis KIM | y1500 | -78 | 4 | GCGCTTGATAATTATTCTC |
| -72 | 4.6 | GATAATTATTCTCATTTAA | ||
| Serratia proteamaculans 568 | Spro_3415 | -66 | 4.3 | GCACTTGATAATTATTATC |
| -60 | 5.2 | GATAATTATTATCATTTAC | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0843 | -63 | 4.5 | GCACTTGATAATCATTATC |
| -57 | 5.2 | GATAATCATTATCATTTTT | ||
| Edwardsiella tarda EIB202 | ETAE_1142 | -134 | 4.5 | GCAGTTGATAATCATTATC |
|
Position: -103
Score: 4.7 Sequence: AGTAATGATAATTGATATC
Position: -97
Score: 4.6 Sequence: GATAATTGATATCATTTGC
Locus tag: YPZ3_2941
|
||||
| YPZ3_2941 | -103 | 4.7 | AGTAATGATAATTGATATC | |
| -97 | 4.6 | GATAATTGATATCATTTGC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cfrA | ||||
| Ortholog function: TonB-dependent outer membrane receptor | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_01134 | -4 | 4.8 | TGTAATGATAATTATTTTT |
| 2 | 5 | GATAATTATTTTTATTATC | ||
| 8 | 4.5 | TATTTTTATTATCATTTTC | ||
| Yersinia pestis KIM | y0850 | -103 | 4.6 | AGTAATGATAATTGATATC |
| -97 | 4.4 | GATAATTGATATCATTTGC | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2722 | -100 | 4.6 | GCAAATGATTTTAATTTTC |
| -94 | 4.3 | GATTTTAATTTTCATTTAC | ||
|
Position: -157
Score: 4.6 Sequence: CGTTTTAATAATCATTATC
Position: -151
Score: 4.9 Sequence: AATAATCATTATCGTTACC
Locus tag: YPZ3_2989
|
||||
| YPZ3_2989 | -157 | 4.6 | CGTTTTAATAATCATTATC | |
| -151 | 4.9 | AATAATCATTATCGTTACC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fhuC | ||||
| Ortholog function: iron-hydroxamate transporter ATP-binding subunit | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0151 | -57 | 4.4 | CTTTATAATAATCATTCTC |
| -51 | 4.5 | AATAATCATTCTCGTTTAC | ||
| Salmonella typhimurium LT2 | STM0192 | -56 | 4.8 | GGTTATAATAATAATTATC |
| -50 | 4.8 | AATAATAATTATCGTTTAC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03217 | -57 | 4 | GGTCATAAGAATAATTCTC |
| -51 | 4.3 | AAGAATAATTCTCGTTTAC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00166 | -56 | 4 | CGTCATAATAATAATTCTC |
| -50 | 4.5 | AATAATAATTCTCGTTTAC | ||
| Enterobacter sp. 638 | Ent638_0691 | -58 | 4.3 | GGTCATAATAATAATTCTC |
| -52 | 4.5 | AATAATAATTCTCGTTTAC | ||
| Yersinia pestis KIM | y0796 | -157 | 4.4 | CGTTTTAATAATCATTATC |
| -151 | 4.7 | AATAATCATTATCGTTACC | ||
| Serratia proteamaculans 568 | Spro_3978 | -60 | 4.7 | GCTTATAATAATTATTATC |
| -54 | 4.7 | AATAATTATTATCGTTTAC | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3312 | -123 | 4.3 | CTTTATCGTAATCATTATC |
| -117 | 4.5 | CGTAATCATTATCGTTCTC | ||
|
Position: -340
Score: 5.6 Sequence: GATTATGATAATCATTATC
Position: -334
Score: 5.2 Sequence: GATAATCATTATCAATAGC
Locus tag: YPZ3_3463
|
||||
| YPZ3_3463 | -340 | 5.6 | GATTATGATAATCATTATC | |
| -334 | 5.2 | GATAATCATTATCAATAGC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hasR | ||||
| Ortholog function: TonB-dependent heme receptor | ||||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1538 | -102 | 5 | GGTAATGATTTTTATTATC |
| -96 | 4.8 | GATTTTTATTATCATTTTC | ||
| -90 | 4.1 | TATTATCATTTTCATTAAG | ||
|
Position: -104
Score: 4.6 Sequence: AGGTTTGATAATCATTTTC
Position: -98
Score: 5.2 Sequence: GATAATCATTTTCAATATC
Locus tag: YPZ3_3483
|
||||
| YPZ3_3483 | -104 | 4.6 | AGGTTTGATAATCATTTTC | |
| -98 | 5.2 | GATAATCATTTTCAATATC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sodA | ||||
| Ortholog function: manganese/iron superoxide dismutase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3908 | -99 | 4.7 | GGCATTGATAATCATTTTC |
| -93 | 5 | GATAATCATTTTCAATATC | ||
| Salmonella typhimurium LT2 | STM4055 | -99 | 4.7 | GGCATTGATAATCATTTTC |
| -93 | 5 | GATAATCATTTTCAATATC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03093 | -88 | 4.3 | GGCATTGATAAGCATTTTC |
| -82 | 4.4 | GATAAGCATTTTCAATATC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04217 | -88 | 4.3 | GGCATTGATAAGCATTTTC |
| -82 | 4 | GATAAGCATTTTCAATACC | ||
| Enterobacter sp. 638 | Ent638_4063 | -100 | 4.7 | GGCATTGATAATCATTTTC |
| -94 | 5 | GATAATCATTTTCAATATC | ||
| Yersinia pestis KIM | y4080 | -104 | 4.4 | AGGTTTGATAATCATTTTC |
| -98 | 5 | GATAATCATTTTCAATATC | ||
| Serratia proteamaculans 568 | Spro_0081 | -105 | 4.7 | GGCATTGATAATCATTTTC |
| -99 | 5 | GATAATCATTTTCAATATC | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0092 | -105 | 4.9 | AATAATCATTTTCAATATC |
| Proteus mirabilis HI4320 | PMI3036 | -95 | 4.6 | GGATATGATAATGATTTTC |
| -89 | 5.2 | GATAATGATTTTCATTAAC | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0075 | -102 | 4.3 | GGTATTGATAAGCATTTCC |