Propagation of ArgR regulog to Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601
| Source regulog: | ArgR - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | ArgR |
| Regulation mode: | repressor |
| Biological process: | Arginine biosynthesis; Arginine degradation |
| Effector: | Arginine |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601 |
| Orthologous TF(s) | SSPA3013 |
| Regulated genes | 13 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -49
Score: 5.3 Sequence: AATGAATTAATATGCAAA
Locus tag: SSPA0063
|
||||
| SSPA0063 | -49 | 5.3 | AATGAATTAATATGCAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: carA | ||||
| Ortholog function: carbamoyl-phosphate synthase small subunit | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0032 | -49 | 5.2 | TGTGAATTAATATGCAAA |
| -28 | 3.9 | AGTGAGTGAATATTCTCT | ||
| Salmonella typhimurium LT2 | STM0066 | -49 | 5.3 | AATGAATTAATATGCAAA |
| -28 | 3.9 | AGTGAGTGAATATTCTCT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03351 | -22 | 5.3 | AATGAATTAATATGCAAA |
| -1 | 3.9 | AGTGAGTGAATATTCTCT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00040 | -22 | 5.2 | TATGAATTAATATGCAAA |
| Enterobacter sp. 638 | Ent638_0591 | -49 | 5 | TGTGAATTAATATGCAGA |
| -28 | 3.9 | AGTGAGTGAATATTCTTT | ||
| Erwinia amylovora ATCC 49946 | EAM_0660 | -49 | 4.5 | CCTGAATTAATATGCAGA |
| Yersinia pestis KIM | y3693 | -22 | 5 | TATGAATTAATATGCAGA |
| Serratia proteamaculans 568 | Spro_0713 | -49 | 5.1 | TCTGAATTAATATGCAAA |
| -28 | 3.8 | TGTGATTGATTATTCCTT | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3871 | -49 | 5.1 | TCTGAATTAATATGCAAA |
| Edwardsiella tarda EIB202 | ETAE_0593 | -128 | 5 | TCTGAATTAATATGCATA |
| Proteus mirabilis HI4320 | PMI0020 | -49 | 4.6 | TCTGAATTAATATGCATG |
| -28 | 4.4 | TGTGATTTATTATTCTCT | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0603 | -49 | 5.1 | TCTGAATTAATATGCACT |
|
Position: -140
Score: 4.1 Sequence: AATGCATACTTAATCGAT
Position: -129
Score: 4.1 Sequence: AATCGATTTTTATGCAAA
Locus tag: SSPA0474
|
||||
| SSPA0474 | -140 | 4.1 | AATGCATACTTAATCGAT | |
| -129 | 4.1 | AATCGATTTTTATGCAAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hisJ | ||||
| Ortholog function: histidine ABC transporter, substrate-binding protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2309 | -151 | 4.2 | GGTGCATTGAAATGCATA |
| -141 | 4.3 | AATGCATACTTAAGCATT | ||
| -131 | 3.8 | TAAGCATTTTTAATGAAA | ||
| -120 | 3.7 | AATGAAAAATAATACGTC | ||
| Salmonella typhimurium LT2 | STM2354 | -140 | 4.1 | AATGCATACTTAATCGAT |
| -129 | 4.1 | AATCGATTTTTATGCAAA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_00478 | -142 | 3.9 | AATGCATACTTAAGCGCT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02699 | -143 | 3.9 | AATGCATAGTTAAGCGTT |
| Enterobacter sp. 638 | Ent638_2858 | -140 | 3.9 | GGTGCATAGTTAAGCACT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3050 | -227 | 4.2 | AAAGATTTTATAATCAAA |
|
Position: -234
Score: 4.3 Sequence: ACTGAATAATATTTCGCT
Locus tag: SSPA1432
|
||||
| SSPA1432 | -234 | 4.3 | ACTGAATAATATTTCGCT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: astC | ||||
| Ortholog function: acetylornithine and succinylornithine aminotransferase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1748 | -233 | 3.7 | TCTGCATAACATTGCGTT |
| -192 | 3.6 | ATCGCAAACGTATTCACT | ||
| -181 | 4.2 | ATTCACTTTATATGCACT | ||
| Salmonella typhimurium LT2 | STM1303 | -234 | 4.3 | ACTGAATAATATTTCGCT |
| -182 | 3.7 | ATTCACTTTTCATGCAGT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_01774 | -233 | 4.4 | ACTGAATAATATTTCGAT |
| -192 | 4.4 | TTCGCAAATATATTCACT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01221 | -182 | 4.2 | ATTCACTAAATATGCATT |
| Enterobacter sp. 638 | Ent638_1696 | -234 | 4.3 | TGTGAATAATATTTCTGT |
| -192 | 4.1 | GCTGTAAAAATATTCACT | ||
| -181 | 4.2 | ATTCACTTATTATGCATT | ||
|
Position: -73
Score: 4 Sequence: ATTGCATAACTATTCTGC
Position: -5
Score: 4 Sequence: TGTCAATGAGTATTCAAT
Locus tag: SSPA1741
|
||||
| SSPA1741 | -73 | 4 | ATTGCATAACTATTCTGC | |
| -5 | 4 | TGTCAATGAGTATTCAAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: artP | ||||
| Ortholog function: arginine ABC transporter, ATP-binding protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0864 | -73 | 4.9 | ATTGCATAATTATTCTGT |
| -5 | 4 | TGTCAATGAGTATTCAAT | ||
| Salmonella typhimurium LT2 | STM0891 | -73 | 4 | ATTGCATAACTATTCTGC |
| -5 | 4 | TGTCAATGAGTATTCAAT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_02239 | -190 | 4.5 | ATTGCATAACTATTCTGT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00897 | -67 | 4 | ATTGCATAACTATTCTGC |
| Enterobacter sp. 638 | Ent638_1380 | -79 | 4.5 | ATTGCATAACTATTCTGT |
| Erwinia amylovora ATCC 49946 | EAM_1311 | -83 | 3.8 | AATAAATTTTAACGCACA |
| -62 | 4.5 | ATTGCATAACTATTCTGT | ||
| Yersinia pestis KIM | y2829 | -136 | 3.7 | AGCGCAATCAAATACAAA |
| -62 | 4.1 | ATTGCATAAGTATGCCGT | ||
| Serratia proteamaculans 568 | Spro_1656 | -83 | 3.8 | AATAAATTTTAACGCACA |
| -62 | 4.5 | ATTGCATAAGTATTCTGT | ||
| -26 | 4 | CATCAATATCTATTCAAT | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2667 | -62 | 4 | ATTGCATAACTATTCTGC |
| Edwardsiella tarda EIB202 | ETAE_2230 | -17 | 4.4 | ATTGCATAGTTATTCTGA |
| Proteus mirabilis HI4320 | PMI0682 | -85 | 3.7 | AGCAATTTTTTATGCACT |
| -63 | 4.4 | GTTGCATAATTATTCTCA | ||
| -26 | 4 | AGTTAATGACTATTCAAA | ||
| -5 | 4.1 | AACGCATGAGTATTCAAT | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu1588 | -169 | 4.2 | ATAGAATAAATAAGCTTT |
| -63 | 4.8 | ATTGCATAATTATACTAA | ||
| -5 | 4.2 | AAAGCATGAGTATTCAAT | ||
|
Position: -82
Score: 5.1 Sequence: ATTGCATACAAATTCAAT
Locus tag: SSPA1745
|
||||
| SSPA1745 | -82 | 5.1 | ATTGCATACAAATTCAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: artJ | ||||
| Ortholog function: arginine ABC transporter, substrate-binding protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0860 | -115 | 3.8 | ATTTCATTTAAATTATTT |
| -87 | 5.4 | ATTGCATATAAATTCACT | ||
| Salmonella typhimurium LT2 | STM0887 | -103 | 4 | TTAAAATATTTAATCATT |
| -82 | 5.1 | ATTGCATACAAATTCAAT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_02243 | -87 | 5.4 | ATTGCATATAAATTCATT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00893 | -87 | 5.4 | ATTGCATATAAATTCATT |
| Enterobacter sp. 638 | Ent638_1376 | -85 | 5.1 | ATTGCATACAAATTCAAT |
| Erwinia amylovora ATCC 49946 | EAM_1307 | -83 | 3.8 | AATAAATTTTAACGCACA |
| -62 | 4.5 | ATTGCATAACTATTCTGT | ||
| Yersinia pestis KIM | y2844 | -130 | 4.3 | TTTAAATTTTTAATCACA |
| -109 | 4.8 | CTTGCATATAAATTCATA | ||
| Serratia proteamaculans 568 | Spro_1652 | -151 | 3.9 | AACAAATTTTTAATCATT |
| -130 | 5.4 | ATTGCATATTAATTCATT | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2671 | -138 | 3.9 | GATGTAAAAACATGCAAT |
| -118 | 4.1 | ATCGATTTATTAATCATT | ||
| -97 | 5.5 | ATTGCATATAAATTCAAT | ||
| Edwardsiella tarda EIB202 | ETAE_2234 | -168 | 3.8 | AAAATATATTTATACATA |
| -147 | 5 | ATTGCATAACAATTCACT | ||
|
Position: -52
Score: 4.6 Sequence: ACAGAATAAAAATACACT
Position: -31
Score: 4.9 Sequence: TTCGAATAATAATTCACT
Locus tag: SSPA2660
|
||||
| SSPA2660 | -52 | 4.6 | ACAGAATAAAAATACACT | |
| -31 | 4.9 | TTCGAATAATAATTCACT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: argA | ||||
| Ortholog function: N-alpha-acetylglutamate synthase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2818 | -49 | 4.6 | ACAGAATAAAAATACACT |
| -28 | 4.5 | TTCGAATAATCATGCAAA | ||
| Salmonella typhimurium LT2 | STM2992 | -52 | 4.6 | ACAGAATAAAAATACACT |
| -31 | 4.9 | TTCGAATAATAATTCACT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_04183 | -140 | 4.6 | ACAGAATAAAAATACATT |
| -119 | 4.6 | TTCGAATAATCATGCAAT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03226 | -50 | 4.7 | ACAGAATAAAAATACAAT |
| -29 | 4.4 | TACGAATAATCATGCATT | ||
| Enterobacter sp. 638 | Ent638_3261 | -51 | 4.7 | ATCGAATAAAAATACACA |
| -30 | 4.5 | TACGAATAAACATTCACT | ||
| Erwinia amylovora ATCC 49946 | EAM_2726 | -50 | 4.7 | AAAGAATAAAAATACACT |
| -29 | 4.9 | ATCGAATAATAATGCATA | ||
| Yersinia pestis KIM | y3162 | -122 | 3.8 | TCAGTTTATTAATACATA |
| -103 | 4.2 | ACTTTATATATATGCAGT | ||
| -51 | 4.8 | AAAGAATAAAAATACAAA | ||
| -30 | 4.8 | ACCGAATAAAAATTCAAA | ||
| Serratia proteamaculans 568 | Spro_3812 | -51 | 4.8 | AAAGAATAAAAATACAAA |
| -30 | 4.8 | ATCGTATAAATATGCAAA | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0999 | -50 | 4.5 | AAAGAATAAAAATACAGA |
| -29 | 4.8 | TACGAATAAAAATGCAAA | ||
| Edwardsiella tarda EIB202 | ETAE_0713 | 100 | 3.9 | GCAGAATAAAAATACAGA |
| 121 | 4.4 | AGCGAATAGATATTCACA | ||
| Proteus mirabilis HI4320 | PMI2307 | -52 | 4.7 | AAAGAATAAAAATACATT |
| -31 | 4.3 | TGCGAATAAAAATTCACC | ||
| 47 | 4.3 | TCCGTATATTAATGCACA | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0644 | -51 | 4.1 | AAGGAATAAAAAAGCATA |
| -30 | 5 | TACGAATAAAAATTCAAT | ||
|
Position: -1
Score: 5.2 Sequence: TTTGCATAAAAATGCACT
Locus tag: SSPA2947
|
||||
| SSPA2947 | -1 | 5.2 | TTTGCATAAAAATGCACT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: argG | ||||
| Ortholog function: argininosuccinate synthase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3172 | -145 | 4.1 | AGCGCATTATTTTACAAA |
| -69 | 5.2 | TTTGCATAAAAATTCAGT | ||
| Salmonella typhimurium LT2 | STM3290.S | -67 | 5.2 | TTTGCATAAAAATGCACT |
| Citrobacter koseri ATCC BAA-895 | CKO_04574 | -68 | 5.2 | TTTGCATAAAAATGCACT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03580 | -69 | 5.1 | AATGCATAAAAATGCAGT |
| Enterobacter sp. 638 | Ent638_3608 | -67 | 4.9 | TTTGCATAAACATGCAAA |
| Erwinia amylovora ATCC 49946 | EAM_0139 | -139 | 4.2 | TATCAATATTCATGCATT |
| -118 | 5.2 | AGTGAATAAAAATACAAT | ||
| Yersinia pestis KIM | y2595 | -104 | 4.6 | AATCCATAAATATGCAAA |
| Serratia proteamaculans 568 | Spro_4779 | -185 | 4.2 | TATCAATATTCATGCATT |
| -164 | 5.1 | TGTGAATAAAAATACAAT | ||
| Edwardsiella tarda EIB202 | ETAE_3480 | -178 | 4.3 | TATCAATATTCATGCAAT |
| -157 | 5.2 | TATGAATAAAAATACAAT | ||
| Proteus mirabilis HI4320 | PMI3239 | -75 | 4.2 | TATCAATATTCATGCACT |
| -54 | 5.2 | TTTGAATAAAAATACATT | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4742 | -77 | 4.2 | TATCAATATTCATGCATT |
| -56 | 5.2 | TTTGAATAAAAATACATT | ||
|
Position: -181
Score: 3.9 Sequence: TCATCATATTTATGCAGT
Locus tag: SSPA2985
|
||||
| SSPA2985 | -181 | 3.9 | TCATCATATTTATGCAGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gltB | ||||
| Ortholog function: glutamate synthase, large subunit | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3212 | -484 | 4.4 | ACTGCATAATCAATCAAA |
| -463 | 3.8 | ACCGAAATTTCATGCATA | ||
| Salmonella typhimurium LT2 | STM3330 | -574 | 4.5 | ATTGCATAATCAAGCAAA |
| Citrobacter koseri ATCC BAA-895 | CKO_04620 | -540 | 4.5 | ATTGCATAATCAAGCAAA |
| -519 | 3.9 | ACCGCAATTTCATTCACT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03624 | -536 | 3.8 | AATGAAATATATTTCAGC |
| Enterobacter sp. 638 | Ent638_3656 | -495 | 4.1 | TTTGAATAAAAACCCACT |
| -474 | 4.1 | ATTGCAATTTCATTCACC | ||
| Yersinia pestis KIM | y0128 | -590 | 3.7 | ATTCATCATAAATGCAAA |
| -580 | 3.8 | AATGCAAATAAAACCACT | ||
| Serratia proteamaculans 568 | Spro_4344 | -586 | 4.4 | ATTCATTATAAATGCAAA |
| -576 | 4.4 | AATGCAAATAAAATCACT | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0312 | -563 | 4.8 | AATGCATTTTTATTCGCT |
| Edwardsiella tarda EIB202 | ETAE_0527 | -584 | 4.3 | TCTGTATCAAAATTCACT |
| -563 | 4.8 | AGTGACTTTAAATTCATT | ||
| Proteus mirabilis HI4320 | PMI3677 | -275 | 4.5 | AATGAAATAATTTTCAAA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4009 | -562 | 4.5 | CATGAATAAATAATCAAA |
| -541 | 3.9 | ATTGACAAAATAAGCATA | ||
|
Position: -64
Score: 4.9 Sequence: TTTGCATAAAAATTCATC
Locus tag: SSPA3013
|
||||
| SSPA3013 | -64 | 4.9 | TTTGCATAAAAATTCATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: argR | ||||
| Ortholog function: arginine repressor | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3237 | -62 | 4.9 | TTTGCATAAAAATTCATC |
| Salmonella typhimurium LT2 | STM3360 | -64 | 4.9 | TTTGCATAAAAATTCATC |
| Citrobacter koseri ATCC BAA-895 | CKO_04642 | -64 | 4.9 | TTTGCATAAAAATTCATC |
| -44 | 4 | TATGCATAATAATGTTGT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03645 | -64 | 4.8 | TTTGCATAAAAATTCATG |
| Enterobacter sp. 638 | Ent638_3672 | -63 | 5.3 | TTTGCATAAAAATTCATT |
| -53 | 4.1 | AATTCATTTACATGCATA | ||
| Erwinia amylovora ATCC 49946 | EAM_3122 | -83 | 5.3 | TTTGCATAAAAATTCATT |
| -63 | 4.7 | ATTGCATAATAATGTAAA | ||
| Yersinia pestis KIM | y0667 | -66 | 5 | GTTGAATAAAAATTCATT |
| -56 | 4.5 | AATTCATTTATATGCATA | ||
| Serratia proteamaculans 568 | Spro_0468 | -64 | 5.4 | ATTGCATAAAAATTCATT |
| -54 | 4.5 | AATTCATTTATATGCATA | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0684 | -65 | 5.3 | ATTGCATAAAAATTCACA |
| Edwardsiella tarda EIB202 | ETAE_0384 | -61 | 4.9 | ATTGCATAAAAATTCACG |
| Proteus mirabilis HI4320 | PMI3399 | -64 | 4.9 | GTTGCATAAAAATTCACT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4548 | -84 | 3.9 | ATTGGCTATAAAATCATT |
| -63 | 5.4 | ATTGCATAAAAATTCATT | ||
|
Position: -69
Score: 4.8 Sequence: AGTGATTTTTTATTCATA
Locus tag: SSPA3112
|
||||
| SSPA3112 | -69 | 4.8 | AGTGATTTTTTATTCATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: argD | ||||
| Ortholog function: acetylornithine/succinyldiaminopimelate aminotransferase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3359 | -69 | 4.8 | AGTGATTTTTTATGCATA |
| Salmonella typhimurium LT2 | STM3468 | -69 | 4.8 | AGTGATTTTTTATTCATA |
| -48 | 4.4 | TGTGATTATAATTTCACT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_04780 | -57 | 4.8 | AGTGATTTTTTATGCATA |
| -36 | 3.9 | TATGACTGAAATTTCATT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03745 | -74 | 4.7 | ACTGATTTTTTATGCATA |
| Enterobacter sp. 638 | Ent638_3786 | -55 | 4.7 | TGTGATTTTTTATGCATA |
| -34 | 4.4 | TGTGATTATATTTTCACT | ||
| Erwinia amylovora ATCC 49946 | EAM_3227 | -70 | 4.7 | TTTGACTTTTTATGCATA |
| -49 | 4.2 | TATGACTATATTTTCATA | ||
| Yersinia pestis KIM | y3954 | -72 | 4.3 | GATGATTTTTTATGCATA |
| Serratia proteamaculans 568 | Spro_4582 | -84 | 4.3 | ATTGGTTTTTTATGCATA |
| -63 | 4.4 | TGTGATTATATTTTCACT | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4065 | -72 | 4.8 | AGTGATTTTTTATGCATA |
| -62 | 4.6 | TATGCATATTTATTGACT | ||
| -51 | 4.5 | ATTGACTATATTTTCATT | ||
| Edwardsiella tarda EIB202 | ETAE_3247 | -73 | 4.9 | ATTGATTTATTATTCATA |
| -52 | 4.4 | TATGATTATAAAATCACT | ||
| Proteus mirabilis HI4320 | PMI2821 | -68 | 4.9 | TTTGATTTTTTATTCATA |
| -47 | 4.5 | AGTGATTATATTTTCATT | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0394 | -74 | 4.8 | TTTGATTTTTTATGCATA |
|
Position: -65
Score: 5 Sequence: AATGTATTTTTATTCATA
Locus tag: SSPA3684
|
||||
| SSPA3684 | -65 | 5 | AATGTATTTTTATTCATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: argE | ||||
| Ortholog function: acetylornithine deacetylase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3957 | -65 | 5 | AGTGTATTTTTATTCATA |
| -44 | 4.1 | ACTGCATGAATATTGATA | ||
| Salmonella typhimurium LT2 | STM4120 | -65 | 5 | AATGTATTTTTATTCATA |
| -44 | 4.2 | AATGCATGAATATTGATA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03037 | -26 | 5 | AATGTATTTTTATTCACA |
| -5 | 4.2 | AaTGcATgaATATTgAta | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04246 | -26 | 5.3 | ATTGTATTTTTATTCAAA |
| -4 | 4.2 | AaTGcATgaATATTgAta | ||
| Enterobacter sp. 638 | Ent638_4029 | -65 | 5 | AGTGTATTTTTATTCACA |
| -44 | 4.2 | AGTGCATGAATATTGATA | ||
| Erwinia amylovora ATCC 49946 | EAM_0137 | -65 | 5.2 | ATTGTATTTTTATTCACT |
| -44 | 4.2 | AATGCATGAATATTGATA | ||
| Yersinia pestis KIM | y0309 | -197 | 4.5 | TATGCATATAAAAACATA |
| -64 | 4.9 | ACTGTATTTTTATTCATA | ||
| -43 | 4.1 | ACTGCATGAATATTGATA | ||
| Serratia proteamaculans 568 | Spro_4782 | -70 | 5.1 | ATTGTATTTTTATTCACA |
| -49 | 4.2 | AATGCATGAATATTGATA | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0191 | -64 | 5.3 | ATTGTATTTTTATTCAAA |
| -43 | 4.2 | AATGCATGAATATTGATA | ||
| Edwardsiella tarda EIB202 | ETAE_3483 | -64 | 5.2 | ATTGTATTTTTATTCATA |
| -43 | 4.3 | ATTGCATGAATATTGATA | ||
| Proteus mirabilis HI4320 | PMI3236 | -64 | 5.2 | AATGTATTTTTATTCAAA |
| -43 | 4.2 | AGTGCATGAATATTGATA | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4745 | -64 | 5.2 | AATGTATTTTTATTCAAA |
| -43 | 4.2 | AATGCATGAATATTGATA | ||
|
Position: -41
Score: 5 Sequence: TATGAATAAAAATACATT
Locus tag: SSPA3685
|
||||
| SSPA3685 | -41 | 5 | TATGAATAAAAATACATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: argC | ||||
| Ortholog function: N-acetyl-gamma-glutamyl-phosphate reductase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3958 | -127 | 4.1 | TATCAATATTCATGCAGT |
| -106 | 5 | TATGAATAAAAATACACT | ||
| Salmonella typhimurium LT2 | STM4121 | -62 | 4.2 | TATCAATATTCATGCATT |
| -41 | 5 | TATGAATAAAAATACATT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03036 | -128 | 4.2 | TATCAATATTCATGCATT |
| -107 | 5 | TGTGAATAAAAATACATT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04247 | -87 | 4.2 | TATCAATATTCATGCATT |
| -66 | 5.3 | TTTGAATAAAAATACAAT | ||
| Enterobacter sp. 638 | Ent638_4028 | -62 | 4.2 | TATCAATATTCATGCACT |
| -41 | 5 | TGTGAATAAAAATACACT | ||
| Yersinia pestis KIM | y0310 | -219 | 4.1 | TATCAATATTCATGCAGT |
| -198 | 4.9 | TATGAATAAAAATACAGT | ||
| -65 | 4.5 | TATGTTTTTATATGCATA | ||
| Serratia proteamaculans 568 | Spro_4781 | -185 | 4.2 | TATCAATATTCATGCATT |
| -164 | 5.1 | TGTGAATAAAAATACAAT | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0192 | -177 | 4.2 | TATCAATATTCATGCATT |
| -156 | 5.3 | TTTGAATAAAAATACAAT | ||
| Edwardsiella tarda EIB202 | ETAE_3482 | -178 | 4.3 | TATCAATATTCATGCAAT |
| -157 | 5.2 | TATGAATAAAAATACAAT | ||
| Proteus mirabilis HI4320 | PMI3237 | -75 | 4.2 | TATCAATATTCATGCACT |
| -54 | 5.2 | TTTGAATAAAAATACATT | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4744 | -77 | 4.2 | TATCAATATTCATGCATT |
| -56 | 5.2 | TTTGAATAAAAATACATT | ||
|
Position: -45
Score: 5.4 Sequence: AGTGAATTTTAATTCAAT
Locus tag: SSPA3966
|
||||
| SSPA3966 | -45 | 5.4 | AGTGAATTTTAATTCAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: argF | ||||
| Ortholog function: ornithine carbamoyltransferase | ||||
| Salmonella typhimurium LT2 | STM4469 | -66 | 4.3 | AATGAATAATCATCCATA |
| -45 | 5.4 | AGTGAATTTTAATTCAAT | ||
| Yersinia pestis KIM | y0740 | -111 | 4.5 | ATTGAATATTTATACCTA |
| -90 | 5.4 | ATTGAATTTAAATTCATA | ||
| Serratia proteamaculans 568 | Spro_0554 | -62 | 4.8 | ATTGAATATTCATACATA |
| -41 | 5.5 | AGTGAATTTAAATTCAAT | ||
| Proteus mirabilis HI4320 | PMI3457 | -55 | 4 | GATGAATATTTATTGTAT |
| -34 | 5.6 | ATTGAATATAAATTCAAT | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4490 | -63 | 4.5 | ATTGCATTTTTATAGATA |
| -42 | 5.4 | ATTGAATTTAAATGCAAA | ||