Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Fur regulog to Candidatus Riesia pediculicola USDA

Reference regulog properties
Source regulog: Fur - Enterobacteriales
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor (activator)
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Candidatus Riesia pediculicola USDA
Orthologous TF(s) No orthologous TFs found
Regulated genes 5
Built upon 656 sites [see more]
Predicted regulatory interactions in Candidatus Riesia pediculicola USDA
Locus tag Position Score Sequence
Position: -216
Score: 4.3
Sequence: ATTAATGAAATTAATTTTT
Locus tag: RIEPE_0538
RIEPE_0538 -216 4.3 ATTAATGAAATTAATTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sodA
Ortholog function: manganese/iron superoxide dismutase
Escherichia coli str. K-12 substr. MG1655 b3908 -99 4.7 GGCATTGATAATCATTTTC
-93 5 GATAATCATTTTCAATATC
Salmonella typhimurium LT2 STM4055 -99 4.7 GGCATTGATAATCATTTTC
-93 5 GATAATCATTTTCAATATC
Citrobacter koseri ATCC BAA-895 CKO_03093 -88 4.3 GGCATTGATAAGCATTTTC
-82 4.4 GATAAGCATTTTCAATATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04217 -88 4.3 GGCATTGATAAGCATTTTC
-82 4 GATAAGCATTTTCAATACC
Enterobacter sp. 638 Ent638_4063 -100 4.7 GGCATTGATAATCATTTTC
-94 5 GATAATCATTTTCAATATC
Yersinia pestis KIM y4080 -104 4.4 AGGTTTGATAATCATTTTC
-98 5 GATAATCATTTTCAATATC
Serratia proteamaculans 568 Spro_0081 -105 4.7 GGCATTGATAATCATTTTC
-99 5 GATAATCATTTTCAATATC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0092 -105 4.9 AATAATCATTTTCAATATC
Proteus mirabilis HI4320 PMI3036 -95 4.6 GGATATGATAATGATTTTC
-89 5.2 GATAATGATTTTCATTAAC
Photorhabdus luminescens subsp. laumondii TTO1 plu0075 -102 4.3 GGTATTGATAAGCATTTCC