Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of ModE regulog to Escherichia coli C str. ATCC 8739

Reference regulog properties
Source regulog: ModE - Enterobacteriales
Regulator type: Transcription factor
Regulator family: ModE
Regulation mode: repressor (activator)
Biological process: Molybdopterin biosynthesis; Molybdenum homeostasis
Effector: Molybdate
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Escherichia coli C str. ATCC 8739
Orthologous TF(s) EcolC_2901
Regulated genes 5
Built upon 55 sites [see more]
Predicted regulatory interactions in Escherichia coli C str. ATCC 8739
Locus tag Position Score Sequence
Position: -37
Score: 6.2
Sequence: CGCTATATATGACAATATATAGCG
Locus tag: EcolC_0695
EcolC_0695 -37 6.2 CGCTATATATGACAATATATAGCG
Supported by regulated orthologs from reference regulons
Ortholog gene name: yghW
Ortholog function: hypothetical protein
Escherichia coli str. K-12 substr. MG1655 b2998 -37 6.2 CGCTATATATGACAATATATAGCG
Salmonella typhimurium LT2 STM3151 -38 6.9 CGCTATATAATTTATTATATAGCG
Citrobacter koseri ATCC BAA-895 CKO_04392 -36 6.5 CGCTATATAATTTGTTATATAGCG
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03420 -38 6.9 CGCTATATAATTTATTATATAACG
Enterobacter sp. 638 Ent638_3406 -39 6.4 CGCTGTATAATTTATTATATATCG
Serratia proteamaculans 568 Spro_3145 -45 6.8 CGTTATATAATTATTTATATAGCG
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0060 -44 6.6 CGTTATATTATTTAATATATAACG
Edwardsiella tarda EIB202 ETAE_0941 -50 6.3 CGTTATATATTTAGGTATATAGCG
Position: -222
Score: 5.7
Sequence: CGCTATATAAATATATTTATAACC
Locus tag: EcolC_1442
EcolC_1442 -222 5.7 CGCTATATAAATATATTTATAACC
Supported by regulated orthologs from reference regulons
Ortholog gene name: napF
Ortholog function: ferredoxin-type protein, predicted role in electron transfer to periplasmic nitrate reductase (NapA)
Escherichia coli str. K-12 substr. MG1655 b2208 -221 5.7 CGCTATATAAATATATTTATAACC
Salmonella typhimurium LT2 STM2261 -225 6.3 CGTTATATAAATATCTATATAACT
Yersinia pestis KIM y1442 -282 5.1 CGTTATATATATTAAGTGATAACG
Serratia proteamaculans 568 Spro_3488 -422 6.1 CGCTGTATAATCAACTAGATAGCG
Edwardsiella tarda EIB202 ETAE_1114 -246 6 CGCTGTATATTTAAGTAAATAGCG
Position: -97
Score: 6.2
Sequence: CGATGTATACAAGCCTATATAGCG
Locus tag: EcolC_2702
EcolC_2702 -97 6.2 CGATGTATACAAGCCTATATAGCG
Supported by regulated orthologs from reference regulons
Ortholog gene name: dmsA
Ortholog function: Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-)
Escherichia coli str. K-12 substr. MG1655 b0894 -97 6.2 CGATGTATACAAGCCTATATAGCG
Salmonella typhimurium LT2 STM0964 -95 5.9 CGATATATATCAGACTTTATAGCG
-64 6.3 CGCTATATAAAATTCTATACATCG
Citrobacter koseri ATCC BAA-895 CKO_02177 -100 6.3 CATTATATACAAAACTATATAGCG
-69 6.6 CGTTGTATAAATAACTACATAACG
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00926 -61 6.5 CATTATATATATGTCTATATAACG
Enterobacter sp. 638 Ent638_1418 -67 6.4 CTCTATATAAAAAACTATATAGCG
Position: -166
Score: 6.8
Sequence: CGCTATATACATGATTACATAGCG
Locus tag: EcolC_2862
EcolC_2862 -166 6.8 CGCTATATACATGATTACATAGCG
Supported by regulated orthologs from reference regulons
Ortholog gene name: moaA
Ortholog function: Molybdenum cofactor biosynthesis protein MoaA
Escherichia coli str. K-12 substr. MG1655 b0781 -199 6.8 CGCTATATACATGATTACATAGCG
Salmonella typhimurium LT2 STM0802 -200 6.6 CGCTATGTATATGTTTATATAGCG
Citrobacter koseri ATCC BAA-895 CKO_02345 -189 6.9 CGCTATATACATGATTATATAGCG
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00810 -193 6.8 CGATATATATAAGATTATATAGCG
Enterobacter sp. 638 Ent638_1273 -172 6.1 CGCTATGTATAGAATTATACAGCG
Erwinia amylovora ATCC 49946 EAM_1218 -211 6.5 CGCTATATATCAAAATATATAGCG
Yersinia pestis KIM y3023 -242 6.5 CGTTGTATATAATAATATATAGCG
Serratia proteamaculans 568 Spro_1320 -242 6.6 CGCTGTATACACAATTATATAGCG
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2817 -256 6.5 CGCTATATATTATCTTATATATCG
Edwardsiella tarda EIB202 ETAE_2347 -312 6.9 CGTTATATTTTTGATTATATAACG
Proteus mirabilis HI4320 PMI0610 -241 6.6 CGTTGTATTATAAATTATATAACG
Photorhabdus luminescens subsp. laumondii TTO1 plu1499 -234 6.2 AGGTATATATTCAATTATATAACG
Position: -43
Score: 6.2
Sequence: CGTTATATTGTCGCCTACATAACG
Locus tag: EcolC_2899
EcolC_2899 -43 6.2 CGTTATATTGTCGCCTACATAACG
Supported by regulated orthologs from reference regulons
Ortholog gene name: modA
Ortholog function: Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1)
Escherichia coli str. K-12 substr. MG1655 b0763 -43 6.2 CGTTATATTGTCGCCTACATAACG
Salmonella typhimurium LT2 STM0781 -44 6.6 CGTTATATTATCGTTTACATAACG
Citrobacter koseri ATCC BAA-895 CKO_02372 -43 6.3 CGCTATATTTGCGCCTACATAACG
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00777 -42 6.6 CGTTATATTATCGACTACATAACG
Enterobacter sp. 638 Ent638_1254 -43 6.6 CGTTATATTTATTTGTATATAACG
Erwinia amylovora ATCC 49946 EAM_1202 -44 6 CGTTATATCATCATATATATAGCG
Yersinia pestis KIM y3037 -35 6 CGCTATATTCCTCCGTATATAACG
Serratia proteamaculans 568 Spro_1303 -60 6.7 CGTTATATTATTTTTTATATAACG
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1393 -44 6.4 CGTTATATTATTATTTACACAACG
Edwardsiella tarda EIB202 ETAE_2559 -48 6.3 CGCCATATAATCGATTATACAACG
Proteus mirabilis HI4320 PMI0597 -108 6 CGCTATATTTATTGATATATAACC
-55 5.6 CGTTATATCTTGATATATACAGCG
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