Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of CcpA regulog to Bacillus anthracis str. A2012

Reference regulog properties
Source regulog: CcpA - Bacillales
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode:
Biological process: Carbon catabolism
Effector: HPr, phosphocarrier protein
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus anthracis str. A2012
Orthologous TF(s) BA_5348
Regulated genes 20
Built upon 559 sites [see more]
Predicted regulatory interactions in Bacillus anthracis str. A2012
Locus tag Position Score Sequence
Position: -184
Score: 4.5
Sequence: AAAAAAGCGTTTACAT
Locus tag: BA_0436
BA_0436 -184 4.5 AAAAAAGCGTTTACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: iolJ
Ortholog function: Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
Bacillus cereus ATCC 14579 BC5335 -184 4.5 AAAAAAGCGTTTACAT
Paenibacillus sp. JDR-2 Pjdr2_6054 -236 4.5 ATTATAGCGCTTACAA
Position: -68
Score: 5.1
Sequence: ATGTAAACGCTTACTA
Locus tag: BA_0548
BA_0548 -68 5.1 ATGTAAACGCTTACTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: lrgA
Ortholog function: Antiholin-like protein LrgA
Bacillus cereus ATCC 14579 BC5439 -59 5 ATGTAAACGCTTACTT
Bacillus licheniformis DSM 13 BLi03037 -68 4.8 TTGAAAACGCTTTTTT
Bacillus pumilus SAFR-032 BPUM_2534 -68 4.5 TTGTAAACGCTTCATT
Bacillus subtilis subsp. subtilis str. 168 BSU28910 -68 4.9 TTGTAAGCGCTTTATA
Position: -84
Score: 4.5
Sequence: ATGTAAACGCATTTAT
Locus tag: BA_0730
BA_0730 -84 4.5 ATGTAAACGCATTTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: mrp
Ortholog function: Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like
Anoxybacillus flavithermus WK1 Aflv_0142 -34 4 GTGAAACCGAATACAT
Bacillus amyloliquefaciens FZB42 RBAM_001800 -32 4.1 TTGTAAACGAATACAC
Bacillus cereus ATCC 14579 BC0168 -84 4.5 ATGTAAACGCATTTAT
Bacillus licheniformis DSM 13 BLi00172 -31 4.5 TTGTAAACGAATACAA
Bacillus pumilus SAFR-032 BPUM_0145 -35 4.6 TTGTAAACGAATTCAA
Bacillus subtilis subsp. subtilis str. 168 BSU01540 -32 4.1 TTGTAAACGAATACAC
Position: -78
Score: 4.8
Sequence: ATAAAAGCGCTTGCAT
Locus tag: BA_0742
BA_0742 -78 4.8 ATAAAAGCGCTTGCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gntR
Ortholog function: Gluconate operon transcriptional repressor
Bacillus licheniformis DSM 13 BLi04286 -81 4.7 ATGAAAGTGTTTGCAT
Bacillus subtilis subsp. subtilis str. 168 BSU40050 -81 4.7 ATGAAAGTGTTTGCAT
Oceanobacillus iheyensis HTE831 OB3190 -79 4.3 ATTCAAGCGTTTACAA
Position: -34
Score: 5.1
Sequence: TTGAAAGCGTAATCAT
Locus tag: BA_1139
BA_1139 -34 5.1 TTGAAAGCGTAATCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: citH
Ortholog function: Ca2+/citrate complex secondary transporter
Bacillus cereus ATCC 14579 BC0562 -36 5.1 TTGAAAGCGCAATCAT
Position: -39
Score: 4.9
Sequence: TTGTAAACGGTATCAA
Locus tag: BA_1214
BA_1214 -39 4.9 TTGTAAACGGTATCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: treP
Ortholog function: PTS system, trehalose-specific enzyme II, BC component (EC 2.7.1.69)
Bacillus amyloliquefaciens FZB42 RBAM_007970 318 4 GTGAAAACGCTTGCGG
Bacillus cereus ATCC 14579 BC0631 234 4.4 TTGATAACGCTTGCAG
Bacillus halodurans C-125 BH2216 136 4.4 TTGAAAGCCTTGACAT
318 4.4 GTGAAAACGCTTGCTG
Bacillus licheniformis DSM 13 BLi00796 318 4.6 GTGAAAACGCTTGCAG
Bacillus subtilis subsp. subtilis str. 168 BSU07800 318 4.6 GTGAAAACGCTTGCAG
Position: -42
Score: 4.7
Sequence: TTGAAAAGGTTTACAA
Locus tag: BA_1373
BA_1373 -42 4.7 TTGAAAAGGTTTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: BC0805
Ortholog function: Outer surface protein of unknown function, cellobiose operon
Bacillus cereus ATCC 14579 BC0805 -105 4.6 AAGAAAGCGGATTCAA
-42 4.7 TTGAAAAGGTTTACAA
Position: -187
Score: 4.9
Sequence: ATGAAAGCGTGTTCAT
Locus tag: BA_1502
BA_1502 -187 4.9 ATGAAAGCGTGTTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: citS
Ortholog function: Two-component sensor kinase
Bacillus amyloliquefaciens FZB42 RBAM_007780 1297 4.5 TTGATAACGCTTTCGA
Bacillus cereus ATCC 14579 BC0936 -187 4.9 ATGAAAGCGTGTTCAT
Bacillus clausii KSM-K16 ABC1011 -42 4.2 TTGAAACCGTTATACT
Bacillus halodurans C-125 BH3839 -41 4.8 ATGAAAGCGTTTATTA
Bacillus licheniformis DSM 13 BLi00225 1303 4.5 TTGATAACGCTTTCGA
Bacillus subtilis subsp. subtilis str. 168 BSU07580 1297 4.5 TTGATAACGCTTTCGA
Position: -121
Score: 4.7
Sequence: AAGTAAGCGTTTTCTT
Locus tag: BA_1841
BA_1841 -121 4.7 AAGTAAGCGTTTTCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: lutA
Ortholog function: Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit
Anoxybacillus flavithermus WK1 Aflv_2009 -30 4.7 AAGAAAACGTTTTCTT
Bacillus amyloliquefaciens FZB42 RBAM_031470 -181 4.7 ATGTAAGCGATTACTT
Bacillus cereus ATCC 14579 BC1303 -122 4.7 AAGTAAGCGTTTTCTT
Bacillus clausii KSM-K16 ABC0975 -69 4.8 TTGTAAGTGCTTACAT
Bacillus halodurans C-125 BH1832 -70 4.8 TTTAAAACGCTTACAT
Geobacillus kaustophilus HTA426 GK0395 -343 4.8 ATAAAAGCGTTTTCAG
Oceanobacillus iheyensis HTE831 OB0370 -36 4.1 ATGAAATCGCTTCATT
Position: -136
Score: 4.7
Sequence: TTGTAAGCGTTTTCTC
Locus tag: BA_1845
BA_1845 -136 4.7 TTGTAAGCGTTTTCTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ywcJ
Ortholog function: Formate/nitrite family of transporters
Anoxybacillus flavithermus WK1 Aflv_1436 -131 4.5 TCGTAAACGTTTACAA
Bacillus cereus ATCC 14579 BC1308 -136 5.1 TTGTAAACGTTTTCTT
Bacillus subtilis subsp. subtilis str. 168 BSU38060 -142 4.5 ATGATAGCGTTTTCGT
Position: -154
Score: 5
Sequence: TTGTAAACGTTAACAA
Locus tag: BA_1936
BA_1936 -154 5 TTGTAAACGTTAACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: dat
Ortholog function: Branched-chain amino acid aminotransferase (EC 2.6.1.42)
Anoxybacillus flavithermus WK1 Aflv_0590 -170 4.8 ATGTAAGCGGATACAT
Bacillus cereus ATCC 14579 BC1396 -153 5 TTGTAAACGTTAACAA
Bacillus licheniformis DSM 13 BLi02962 -225 5 ATGTAAGCGTATACAA
Bacillus pumilus SAFR-032 BPUM_2473 -200 4.6 GTGTAAGCGTATACAT
Geobacillus kaustophilus HTA426 GK2662 -165 5.1 ATGTAAGCGCATTCAA
Position: -80
Score: 5
Sequence: TTGAAAACGCTTTTAT
Locus tag: BA_3286
BA_3286 -80 5 TTGAAAACGCTTTTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: acoR
Ortholog function: Transcriptional activator of acetoin dehydrogenase operon AcoR
Bacillus amyloliquefaciens FZB42 RBAM_008340 -67 5 TTGAAAGCGCTTTATT
Bacillus cereus ATCC 14579 BC2766 -78 5 TTGAAAACGCTTTTAT
Bacillus halodurans C-125 BH1826 -117 4.7 TTGTTAGCGCTTTCTT
Bacillus licheniformis DSM 13 BLi00853 -51 5.1 TTGAAAGCGCTTTTAT
Bacillus pumilus SAFR-032 BPUM_0455 -59 5.1 TTGAAAGCGCTTTTAT
Bacillus subtilis subsp. subtilis str. 168 BSU08100 -67 5 TTGAAAGCGCTTTATT
Position: -74
Score: 5.1
Sequence: ATGAAAACGCTGTCAT
Locus tag: BA_4660
BA_4660 -74 5.1 ATGAAAACGCTGTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: GK1048
Ortholog function: CBS domain containing protein
Bacillus cereus ATCC 14579 BC3983 -73 5.1 ATGAAAACGCTGTCAT
Position: -54
Score: 4.8
Sequence: ATGCAAACGTTTTCAA
Locus tag: BA_4690
BA_4690 -54 4.8 ATGCAAACGTTTTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cycB
Ortholog function: Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein
Bacillus clausii KSM-K16 ABC3520 -37 4.6 AAGAAAGCGGTTACTT
Bacillus halodurans C-125 BH2019 -55 4.4 TATAAAACGCTTTCAT
Bacillus pumilus SAFR-032 BPUM_3613 -51 4.8 AAGAAAGCGTTTTCTT
Bacillus subtilis subsp. subtilis str. 168 BSU34160 -39 5 TTTAAAGCGCTTTCAT
Position: -233
Score: 4.5
Sequence: AAGAAAGCGTAAACAT
Locus tag: BA_4767
BA_4767 -233 4.5 AAGAAAGCGTAAACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: drm
Ortholog function: Phosphopentomutase (EC 5.4.2.7)
Anoxybacillus flavithermus WK1 Aflv_0998 -114 4.9 ATGAAAACGTTTTATA
Bacillus amyloliquefaciens FZB42 RBAM_021610 -74 4.5 ATGTAAACGGTTTATA
Bacillus cereus ATCC 14579 BC4087 -222 4.5 AAGAAAGCGTAAACAT
Bacillus licheniformis DSM 13 BLi02500 -99 4.1 GTGTAAACGGTTTATA
Bacillus pumilus SAFR-032 BPUM_2081 -82 4.5 TTGTAAACGGTTTATA
Bacillus subtilis subsp. subtilis str. 168 BSU23500 -77 4.7 ATGAAAACGGTTTATA
Position: -57
Score: 4.3
Sequence: ATGTGAACGTTTTCTT
Locus tag: BA_4935
BA_4935 -57 4.3 ATGTGAACGTTTTCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yqgQ
Ortholog function: Hypothetical Cytosolic Protein
Anoxybacillus flavithermus WK1 Aflv_0894 -23 4.5 TTGAAAACGCTTATAC
Bacillus cereus ATCC 14579 BC4261 -57 4.3 ATGTGAACGTTTTCTT
Bacillus pumilus SAFR-032 BPUM_2216 -49 4.2 CTGAAAGCGCATTTAT
Bacillus subtilis subsp. subtilis str. 168 BSU24860 -79 4.7 TTGTCAGCGTTTTCTT
Position: -179
Score: 4.3
Sequence: ATGTATACGTTTTCTT
Locus tag: BA_5185
BA_5185 -179 4.3 ATGTATACGTTTTCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sdhC
Ortholog function: Succinate dehydrogenase cytochrome b558 subunit
Bacillus amyloliquefaciens FZB42 RBAM_025520 -143 4.3 ATGTACACGTTTTCTT
Bacillus cereus ATCC 14579 BC4518 -178 4.3 ATGTATACGTTTTCTT
Bacillus clausii KSM-K16 ABC2664 -190 4.3 TTGAATCCGTTTTCTT
Bacillus licheniformis DSM 13 BLi02994 -143 4.4 ATGTACGCGTTTTCTT
Bacillus pumilus SAFR-032 BPUM_2503 -139 4.2 ATGTACGCGGTTTCTT
Bacillus subtilis subsp. subtilis str. 168 BSU28450 -139 4.4 ATGTACGCGTTTTCTT
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