Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of PurR regulog to Salmonella enterica subsp. enterica serovar Typhi str. 404ty

Reference regulog properties
Source regulog: PurR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Purine metabolism
Effector: Hypoxanthine; Guanine
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Salmonella enterica subsp. enterica serovar Typhi str. 404ty
Orthologous TF(s) Salmonelentericaenterica_010100011975, Salmonelentericaenterica_010100007406
Regulated genes 15
Built upon 313 sites [see more]
Predicted regulatory interactions in Salmonella enterica subsp. enterica serovar Typhi str. 404ty
Locus tag Position Score Sequence
Position: 24
Score: 3.9
Sequence: CAGCAAGGGTTTACGG
Locus tag: Salmonelentericaenterica_010100001741
Salmonelentericaenterica_010100001741 24 3.9 CAGCAAGGGTTTACGG
Supported by regulated orthologs from reference regulons
Ortholog gene name: ydiJ
Ortholog function: predicted FAD-linked oxidoreductase
Escherichia coli str. K-12 substr. MG1655 b1687 -224 4.9 ACGCAAACGATTTACT
Salmonella typhimurium LT2 STM1365 -100 5 ACGCAAACGATTAAGC
Citrobacter koseri ATCC BAA-895 CKO_01722 -49 4.7 ACGCAAACGATTAAAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02158 -68 5.2 ACGCAAACGTTTAGTT
Enterobacter sp. 638 Ent638_1747 -165 5 ACGCAAACGATTATCT
Erwinia amylovora ATCC 49946 EAM_1648 -35 4 ACGCAATCGATTCTCA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1856 -237 4.2 GCGCACACGATTGCGA
Photorhabdus luminescens subsp. laumondii TTO1 plu2626 -129 3.7 AGGTAAACGCTTGCCT
Position: -58
Score: 5.4
Sequence: AGGCAAACGTTTACCT
Position: 28
Score: 4.3
Sequence: GGGCAAACGTTTCCAC
Locus tag: Salmonelentericaenterica_010100007406
Salmonelentericaenterica_010100007406 -58 5.4 AGGCAAACGTTTACCT
28 4.3 GGGCAAACGTTTCCAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: purR
Ortholog function: purine nucleotide synthesis repressor
Escherichia coli str. K-12 substr. MG1655 b1658 -60 5.4 AGGCAAACGTTTACCT
28 4.4 GAGCAAACGTTTCCAC
Salmonella typhimurium LT2 STM1430 -58 5.4 AGGCAAACGTTTACCT
28 4.3 GGGCAAACGTTTCCAC
Citrobacter koseri ATCC BAA-895 CKO_01672 -60 5.6 AGGCAAACGTTTACTT
28 4.4 GAGCAAACGTTTCCAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01996 -59 5.7 AGGCAAACGTTTACGT
28 4.6 GCGCAAACGTTTCCAC
Enterobacter sp. 638 Ent638_1789 -60 5.4 AGGCAAACGTTTACCT
28 4.6 GCGCAAACGTTTCCAC
Erwinia amylovora ATCC 49946 EAM_1663 -62 4.3 AGGCAAACGATTAACA
Yersinia pestis KIM y1950 -62 4.3 AGGCAAACGATTAACA
Serratia proteamaculans 568 Spro_2195 -62 4.3 AGGCAAACGATTAACA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1925 -60 4.3 AGGCAAACGATTAACA
Edwardsiella tarda EIB202 ETAE_1674 -57 4.3 AGGCAAACGATTAACA
Position: -272
Score: 5.8
Sequence: GCGCAAACGTTTTCGT
Locus tag: Salmonelentericaenterica_010100010205
Salmonelentericaenterica_010100010205 -272 5.8 GCGCAAACGTTTTCGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: purH
Ortholog function: phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase
Escherichia coli str. K-12 substr. MG1655 b4006 -123 5.8 GCGCAAACGTTTTCGT
Salmonella typhimurium LT2 STM4176 -123 5.8 GCGCAAACGTTTTCGT
Citrobacter koseri ATCC BAA-895 CKO_02983 -123 5.8 GCGCAAACGTTTTCGT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04388 -126 5.8 GCGCAAACGTTTTCGT
Enterobacter sp. 638 Ent638_0216 -60 5.8 GCGCAAACGTTTTCGT
Erwinia amylovora ATCC 49946 EAM_0249 -144 5.7 GCGCAAACGTTTTCGC
Yersinia pestis KIM y0502 -111 5.7 ACGCAATCGTTTTCGC
Serratia proteamaculans 568 Spro_0293 -179 5.9 ACGCAAACGTTTTCGC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0241 -159 5.9 ACGCAAACGTTTTCGC
Edwardsiella tarda EIB202 ETAE_0186 -116 6 ACGCAAACGTTTTCGT
Proteus mirabilis HI4320 PMI2768 -155 5.6 ACGCAAACGTTTGCGT
Photorhabdus luminescens subsp. laumondii TTO1 plu0495 -283 6 ACGCAAACGTTTTCGT
Position: -100
Score: 4
Sequence: AGGAAAACGATTGCTA
Locus tag: Salmonelentericaenterica_010100014447
Salmonelentericaenterica_010100014447 -100 4 AGGAAAACGATTGCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: pyrD
Ortholog function: dihydroorotate dehydrogenase
Escherichia coli str. K-12 substr. MG1655 b0945 -102 4.2 CGGAAAACGTTTGCGT
Salmonella typhimurium LT2 STM1058 -101 4 AGGAAAACGATTGCTA
Citrobacter koseri ATCC BAA-895 CKO_02123 -101 4 AGGAAAACGATTGCTA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00974 -111 4.4 AGGTAATCGTTTGCGC
Enterobacter sp. 638 Ent638_1457 -110 4.3 AGGAAAACGATTGCGC
Erwinia amylovora ATCC 49946 EAM_1366 -101 3.8 AAATAAACGTTTTTTA
Yersinia pestis KIM y2755 -254 5.4 TCGCAAACGTTTACTT
Serratia proteamaculans 568 Spro_1740 -110 4.2 GGGAAAACGATTGCGT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2538 -126 4.7 CCGCAAACGTTTTACT
Edwardsiella tarda EIB202 ETAE_1248 -108 3.9 AGTAAAACGTTTGCTT
Proteus mirabilis HI4320 PMI0771 -102 4.2 ATTGAAACGTTTACTT
Position: -63
Score: 5.1
Sequence: TCGCAAACGTTTGCTT
Locus tag: Salmonelentericaenterica_010100015232
Salmonelentericaenterica_010100015232 -63 5.1 TCGCAAACGTTTGCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: purM
Ortholog function: phosphoribosylformylglycinamidine cyclo-ligase
Escherichia coli str. K-12 substr. MG1655 b2499 -79 5.1 TCGCAAACGTTTGCTT
Salmonella typhimurium LT2 STM2499.S -63 5.1 TCGCAAACGTTTGCTT
Citrobacter koseri ATCC BAA-895 CKO_00291 -299 5.1 TCGCAAACGTTTGCTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02824 -74 5.1 TCGCAAACGTTTGCTT
Enterobacter sp. 638 Ent638_2988 -79 4.9 TCGCAAACGTTTGCCT
Erwinia amylovora ATCC 49946 EAM_2441 -84 5.1 TCGCAAACGTTTGCTT
Yersinia pestis KIM y1407 -242 4.9 TCGCAAACGTTTGCCT
Serratia proteamaculans 568 Spro_3524 -59 4.9 TCGCAAACGTTTGCCT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1254 -129 4.6 TCGCAAACGATTGCCT
Edwardsiella tarda EIB202 ETAE_1086 -116 4.9 TAGCAAACGTTTGCTT
Proteus mirabilis HI4320 PMI1575 -79 5.1 TCGCAAACGTTTGCTT
Photorhabdus luminescens subsp. laumondii TTO1 plu2760 -80 5.1 TCGCAAACGTTTGCTT
Position: -131
Score: 5
Sequence: ACGCAAACGTGTGCGT
Locus tag: Salmonelentericaenterica_010100015367
Salmonelentericaenterica_010100015367 -131 5 ACGCAAACGTGTGCGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: purC
Ortholog function: phosphoribosylaminoimidazole-succinocarboxamidesynthase
Escherichia coli str. K-12 substr. MG1655 b2476 -169 5 ACGCAAACGTGTGCGT
Salmonella typhimurium LT2 STM2487 -131 5 ACGCAAACGTGTGCGT
Citrobacter koseri ATCC BAA-895 CKO_00311 -145 5 ACGCAAACGTGTGCGT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02810 -187 5 ACGCAAACGTGTGCGT
Enterobacter sp. 638 Ent638_2972 -68 5 ACGCAAACGTGTGCGT
Erwinia amylovora ATCC 49946 EAM_2430 -151 4.6 ACGTAAACGATTGCTT
Serratia proteamaculans 568 Spro_3507 -88 4.1 ACGGTATCGTTTGCGT
Edwardsiella tarda EIB202 ETAE_1098 -97 4.5 ACGCAATCGTTTGGCT
Position: -74
Score: 4.8
Sequence: ACGAAAACGTTTGCTT
Locus tag: Salmonelentericaenterica_010100020721
Salmonelentericaenterica_010100020721 -74 4.8 ACGAAAACGTTTGCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: codB
Ortholog function: cytosine permease
Escherichia coli str. K-12 substr. MG1655 b0336 -82 4.6 ACGAAAACGATTGCTT
Salmonella typhimurium LT2 STM3333 -74 4.8 ACGAAAACGTTTGCTT
Edwardsiella tarda EIB202 ETAE_3253 -83 4.6 AAGAAAACGTTTGCTT
Proteus mirabilis HI4320 PMI1458 -80 4.4 ACGAAAACGTTTGCAT
Position: -65
Score: 4.6
Sequence: ACGAAAACGTTTCCGC
Locus tag: Salmonelentericaenterica_010100022428
Salmonelentericaenterica_010100022428 -65 4.6 ACGAAAACGTTTCCGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: pyrC
Ortholog function: dihydroorotase
Escherichia coli str. K-12 substr. MG1655 b1062 -67 4.3 AGGAAAACGTTTCCGC
Salmonella typhimurium LT2 STM1163 -65 4.6 ACGAAAACGTTTCCGC
Citrobacter koseri ATCC BAA-895 CKO_02001 -66 4.6 ACGAAAACGTTTCCGC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01074 -77 4.9 AGGAAAACGTTTACGC
Enterobacter sp. 638 Ent638_1576 -82 5.1 ACGAAAACGTTTACGC
Proteus mirabilis HI4320 PMI1678 -99 4.2 ATTTAATCGTTTTCGT
-48 3.8 ATCCAATCGTTGATCT
Position: -108
Score: 4
Sequence: AAGAGAACGTTTGCGT
Locus tag: Salmonelentericaenterica_010100025318
Salmonelentericaenterica_010100025318 -108 4 AAGAGAACGTTTGCGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gcvT
Ortholog function: Glycine cleavage system, aminomethyltransferase (EC 2.1.2.10)
Escherichia coli str. K-12 substr. MG1655 b2905 -106 3.8 AAGAGAACGATTGCGT
Salmonella typhimurium LT2 STM3055 -108 4 AAGAGAACGTTTGCGT
Citrobacter koseri ATCC BAA-895 CKO_04269 -106 4 AAGAGAACGTTTGCGT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03341 -107 4 AAGAGAACGTTTGCGT
Enterobacter sp. 638 Ent638_3324 -104 4 AAGAGAACGTTTGCGT
Erwinia amylovora ATCC 49946 EAM_2791 -74 4 AGGGTAACGTTTGCGT
Yersinia pestis KIM y3294 -104 4 GAGCAAAAGGTATCGT
-98 3.8 AAGGTATCGTTTGCGT
Serratia proteamaculans 568 Spro_3916 -163 3.8 AAGGTATCGTTTGCGT
Photorhabdus luminescens subsp. laumondii TTO1 plu3598 -108 3.8 AAGATATCGTTTGCGT
Position: 27
Score: 4.9
Sequence: GCGCAACCGGTTGCGC
Locus tag: Salmonelentericaenterica_010100036403
Salmonelentericaenterica_010100036403 27 4.9 GCGCAACCGGTTGCGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: xanP
Ortholog function: xanthine/uracil permease, NCS2 family
Escherichia coli str. K-12 substr. MG1655 b3654 -68 4.8 TGGCAAACGTTTGCTT
30 4.9 GCGCAACCGGTTGCGC
Salmonella typhimurium LT2 STM3747 -68 4.9 TCGCAATCGTTTGCTT
30 4.9 GCGCAACCGGTTGCGC
Citrobacter koseri ATCC BAA-895 CKO_05111 -53 5.1 ATGCAATCGTTTGCTT
45 4.9 GCGCAACCGGTTGCGC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04013 -68 4.8 TGGCAAACGTTTGCTT
30 4.9 GCGCAACCGGTTGCGC
Enterobacter sp. 638 Ent638_0073 -68 4.9 TCGCAACCGTTTGCTT
30 4.8 GCGCAACCGATTGCGC
Erwinia amylovora ATCC 49946 EAM_0040 -69 4.6 TAGCAAACGATTGCTT
Yersinia pestis KIM y0107 -18 5.1 GCGCAAACGATTGCTT
Serratia proteamaculans 568 Spro_4873 -70 5.1 GCGCAACCGTTTGCTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0035 -74 4.9 TAGCAAACGTTTGCTT
Edwardsiella tarda EIB202 ETAE_0025 -70 5.3 ACGCAAACGATTGCTT
Proteus mirabilis HI4320 PMI2868 -68 5.3 ACGCAAACGATTGCTT
Photorhabdus luminescens subsp. laumondii TTO1 plu0247 -68 5.3 ACGCAAACGATTGCTT
Position: 27
Score: 3.6
Sequence: ACGCAAACTCTGTTGG
Locus tag: Salmonelentericaenterica_010100041435
Salmonelentericaenterica_010100041435 27 3.6 ACGCAAACTCTGTTGG
Supported by regulated orthologs from reference regulons
Ortholog gene name: pyrB
Ortholog function: aspartate carbamoyltransferase catalytic subunit
Escherichia coli str. K-12 substr. MG1655 b4245 -92 3.7 AATAAACCGTTTGCGC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04657 -227 5.1 AGGCAAACGATTACCT
Enterobacter sp. 638 Ent638_0447 -137 3.9 GCTCAAGCGTGTTCGA
Erwinia amylovora ATCC 49946 EAM_3054 -285 4.5 AAGCAAACGATCACCT
Yersinia pestis KIM y0161 -322 4.1 AGGTAATCGTTTGCTA
Serratia proteamaculans 568 Spro_0545 -268 4 AGCCAATCGATTGCGA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0382 -289 4.7 AAGCAACCGATTGCGA
Edwardsiella tarda EIB202 ETAE_3125 -322 4.1 GGGTAACCGTTTGCGC
Proteus mirabilis HI4320 PMI3455 -235 4.8 AAGCAAACGCTTGCGT
Position: -51
Score: 6
Sequence: ACGCAAACGTTTTCGT
Locus tag: Salmonelentericaenterica_010100048102
Salmonelentericaenterica_010100048102 -51 6 ACGCAAACGTTTTCGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: purT
Ortholog function: phosphoribosylglycinamide formyltransferase 2
Escherichia coli str. K-12 substr. MG1655 b1849 -53 6 ACGCAAACGTTTTCGT
Salmonella typhimurium LT2 STM1883 -51 6 ACGCAAACGTTTTCGT
Citrobacter koseri ATCC BAA-895 CKO_01117 -52 6 ACGCAAACGTTTTCGT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02364 -56 6 ACGCAAACGTTTTCGT
Enterobacter sp. 638 Ent638_2418 -49 6 ACGCAAACGTTTTCGT
Erwinia amylovora ATCC 49946 EAM_1994 -58 6 ACGCAAACGTTTTCGT
Yersinia pestis KIM y2533 -85 5.9 ACGCAATCGTTTTCGT
Serratia proteamaculans 568 Spro_2805 -74 6 ACGCAAACGTTTTCGT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2477 -59 6 ACGCAAACGTTTTCGT
Edwardsiella tarda EIB202 ETAE_1838 -107 5.9 ACGCAAACGGTTTCGT
Proteus mirabilis HI4320 PMI2187 -50 5.4 ATGCAAACGTTTGCGT
Position: -72
Score: 5.9
Sequence: ACGCAAACGTTTTCTT
Locus tag: Salmonelentericaenterica_010100050213
Salmonelentericaenterica_010100050213 -72 5.9 ACGCAAACGTTTTCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cvpA
Ortholog function: membrane protein required for colicin V production
Escherichia coli str. K-12 substr. MG1655 b2313 -72 5.9 ACGCAAACGTTTTCTT
Salmonella typhimurium LT2 STM2363 -72 5.9 ACGCAAACGTTTTCTT
Citrobacter koseri ATCC BAA-895 CKO_00473 -72 5.9 ACGCAAACGTTTTCTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02703 -71 5.9 ACGCAAACGTTTTCTT
Enterobacter sp. 638 Ent638_2862 -72 5.9 ACGCAAACGTTTTCTT
Erwinia amylovora ATCC 49946 EAM_2319 -92 5.9 ACGCAAACGTTTTCTT
Yersinia pestis KIM y1604 -74 5.9 ACGCAAACGTTTTCTT
Serratia proteamaculans 568 Spro_3329 -74 6 ACGCAAACGTTTACGT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3053 -90 5.9 ACGCAAACGTTTTCTT
Proteus mirabilis HI4320 PMI1784 -71 6 ACGCAAACGTTTTCGT
Photorhabdus luminescens subsp. laumondii TTO1 plu3168 -72 6 ACGCAAACGTTTTCGT
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