Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Fur regulog to Yersinia pestis biovar Orientalis str. F1991016

Reference regulog properties
Source regulog: Fur - Enterobacteriales
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor (activator)
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Yersinia pestis biovar Orientalis str. F1991016
Orthologous TF(s) YpF1991016_3339
Regulated genes 38
Built upon 656 sites [see more]
Predicted regulatory interactions in Yersinia pestis biovar Orientalis str. F1991016
Locus tag Position Score Sequence
Position: -205
Score: 4.9
Sequence: ATAAATAATAATCATTTGC
Locus tag: YpF1991016_0122
YpF1991016_0122 -205 4.9 ATAAATAATAATCATTTGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: plu4621
Ortholog function: unknown
Photorhabdus luminescens subsp. laumondii TTO1 plu4621 -196 4.6 GTTAATGATAATAATTTGT
-190 4.2 GATAATAATTTGTATTAAT
Position: -67
Score: 5
Sequence: GCTATTGATAATCACTATC
Position: -61
Score: 4.6
Sequence: GATAATCACTATCATTCTG
Locus tag: YpF1991016_0132
YpF1991016_0132 -67 5 GCTATTGATAATCACTATC
-61 4.6 GATAATCACTATCATTCTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: fhuF
Ortholog function: ferric iron reductase involved in ferric hydroximate transport
Escherichia coli str. K-12 substr. MG1655 b4367 -122 5.1 GATAATGATAACCAATATC
-99 4.5 GATAATTTTTATCATTTGC
-34 4 AGCAATCATTATCATTTAG
Salmonella typhimurium LT2 STM4550 -238 4 GGAATTGATAATGATAACC
-232 5.1 GATAATGATAACCAATATC
Citrobacter koseri ATCC BAA-895 CKO_03429 -234 4.8 GATAATGATAACCAATAGC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04821 -44 4.5 AATATCAGTAATCATTATC
-38 4.4 AGTAATCATTATCATTTAG
Enterobacter sp. 638 Ent638_0527 -237 5.1 GATAATGATAACCAATATC
Yersinia pestis KIM y2642 -67 4.9 GCTATTGATAATCACTATC
-61 4.4 GATAATCACTATCATTCTG
Photorhabdus luminescens subsp. laumondii TTO1 plu4627 -100 4.3 GACAATGATAATAATAATA
-94 5.3 GATAATAATAATAATTATC
-88 4.9 AATAATAATTATCATAATT
-82 4.1 AATTATCATAATTATATTT
Position: -69
Score: 4.4
Sequence: CTTATTGATAAGTATTATC
Position: -63
Score: 4.7
Sequence: GATAAGTATTATCATTTGC
Locus tag: YpF1991016_0367
YpF1991016_0367 -69 4.4 CTTATTGATAAGTATTATC
-63 4.7 GATAAGTATTATCATTTGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yiuA
Ortholog function: siderophore ABC transporter, substrate binding periplasmic protein
Yersinia pestis KIM y2875 -45 4.3 CTTATTGATAAGTATTATC
-39 4.5 GATAAGTATTATCATTTGC
Photorhabdus luminescens subsp. laumondii TTO1 plu2853 -78 4.3 CATATTGATAAGTATTCTC
-72 4 GATAAGTATTCTCATTTGT
Position: -187
Score: 5.4
Sequence: TATAATGATAATAATTATC
Position: -181
Score: 4.7
Sequence: GATAATAATTATCATTGAA
Locus tag: YpF1991016_0559
YpF1991016_0559 -187 5.4 TATAATGATAATAATTATC
-181 4.7 GATAATAATTATCATTGAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: gpmA
Ortholog function: phosphoglyceromutase 1
Escherichia coli str. K-12 substr. MG1655 b0755 -47 5 TATAATGAGAATTATTATC
-41 4.7 GAGAATTATTATCATTAAA
Salmonella typhimurium LT2 STM0772 -47 5 TATAATGAGAATTATTATC
-41 4.5 GAGAATTATTATCATTACA
Citrobacter koseri ATCC BAA-895 CKO_02381 -46 5 TATAATGAGAATTATTATC
-40 4.5 GAGAATTATTATCATTCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00768 -96 4.6 TATAATGAGAATAGTTATC
Enterobacter sp. 638 Ent638_1246 -164 4.7 TATAATGAGAATTGTTATC
-158 4.1 GAGAATTGTTATCATTCAA
Yersinia pestis KIM y3048 -103 5.3 TATAATGATAATAATTATC
-97 4.6 GATAATAATTATCATTGAA
Serratia proteamaculans 568 Spro_1288 -51 4.9 TATAATGATTTTCGTTATC
Edwardsiella tarda EIB202 ETAE_2569 -49 4.6 CATGATGATAATAATTATC
-43 5.3 GATAATAATTATCATTATA
Position: -50
Score: 4.3
Sequence: ACAAACGATTTTGATTATC
Position: -44
Score: 4.9
Sequence: GATTTTGATTATCATTCGC
Locus tag: YpF1991016_1130
YpF1991016_1130 -50 4.3 ACAAACGATTTTGATTATC
-44 4.9 GATTTTGATTATCATTCGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: Spro_1015
Ortholog function: iron(III) ABC transporter, periplasmic protein
Yersinia pestis KIM y3342 -41 4.2 ACAAACGATTTTGATTATC
-35 4.6 GATTTTGATTATCATTCGC
Serratia proteamaculans 568 Spro_1015 -52 4.3 GCTAATGAGAGTGATTATC
Position: -134
Score: 4.9
Sequence: ACTAATGATAATTACTATC
Locus tag: YpF1991016_1408
YpF1991016_1408 -134 4.9 ACTAATGATAATTACTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: exbB
Ortholog function: TonB-dependent siderophore transporter component ExbB
Escherichia coli str. K-12 substr. MG1655 b3006 -82 4.1 AGTAATGAGAACGACTATC
Salmonella typhimurium LT2 STM3159 -82 4.1 AGTAATGAGAACGACTATC
Citrobacter koseri ATCC BAA-895 CKO_04401 -97 4.1 AGTAATGAGAACGACTATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03426 -97 4.3 ACTAATGAGAACCACTATC
Enterobacter sp. 638 Ent638_3417 -97 4.3 ACTAATGAGAACCACTATC
Yersinia pestis KIM y3495 -71 4.8 ACTAATGATAATTACTATC
Serratia proteamaculans 568 Spro_4211 -94 4.4 AATAATGAGAACTACTATC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0358 -206 4.3 AATAATGAGAACGACTATC
Proteus mirabilis HI4320 PMI0029 -170 4.8 AGTAATGATAATTACTATC
Photorhabdus luminescens subsp. laumondii TTO1 plu3941 -98 5.1 AATAATGATAATTACTATC
Position: -74
Score: 4.8
Sequence: AGAAATAGTTATCATTTTC
Locus tag: YpF1991016_3529
YpF1991016_3529 -74 4.8 AGAAATAGTTATCATTTTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fyuA
Ortholog function: TonB-dependent siderophore receptor
Citrobacter koseri ATCC BAA-895 CKO_00905 -74 4.6 AGAAATAGTTATCATTTTC
Citrobacter koseri ATCC BAA-895 CKO_01243 -74 4.6 AGAAATAGTTATCATTTTC
Yersinia pestis KIM y2404 -74 4.6 AGAAATAGTTATCATTTTC
Proteus mirabilis HI4320 PMI2596 -64 4.2 GCAAATGATATTAATTCGC
-58 4.4 GATATTAATTCGCATTAAC
Photorhabdus luminescens subsp. laumondii TTO1 plu2316 -160 5.1 ATTAATGAGAATCATTATC
-154 4.6 GAGAATCATTATCAATAGT
Position: -63
Score: 5.4
Sequence: GTTAATAATTATTATTATC
Locus tag: YpF1991016_3534
YpF1991016_3534 -63 5.4 GTTAATAATTATTATTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: irp2
Ortholog function: non-ribosomal peptide synthase (siderophore synthase)
Citrobacter koseri ATCC BAA-895 CKO_00911 -63 4.9 GTTAATAATTATTATTCTC
Yersinia pestis KIM y2399 -63 5.1 GTTAATAATTATTATTATC
Position: -90
Score: 5
Sequence: GTGAATAATAACCATTATC
Position: -84
Score: 4.8
Sequence: AATAACCATTATCAATAAC
Locus tag: YpF1991016_3535
YpF1991016_3535 -90 5 GTGAATAATAACCATTATC
-84 4.8 AATAACCATTATCAATAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ybtA
Ortholog function: AraC-type transcriptional regulator for yersiniabactin uptake and biosynthetic genes
Citrobacter koseri ATCC BAA-895 CKO_00912 -90 4.7 GTGAATAATAACCATTATC
-84 4.6 AATAACCATTATCAATAAC
Citrobacter koseri ATCC BAA-895 CKO_01249 -90 4.7 GTGAATAATAACCATTATC
-84 4.6 AATAACCATTATCAATAAC
Yersinia pestis KIM y2398 -90 4.7 GTGAATAATAACCATTATC
-84 4.6 AATAACCATTATCAATAAC
Position: -95
Score: 5
Sequence: GATAATGGTTATTATTCAC
Locus tag: YpF1991016_3536
YpF1991016_3536 -95 5 GATAATGGTTATTATTCAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ybtP
Ortholog function: yersiniabactin-iron ABC transporter, ATPase/permease components
Citrobacter koseri ATCC BAA-895 CKO_01250 -191 4.4 GTTATTGATAATGGTTATT
-185 4.7 GATAATGGTTATTATTCAC
Citrobacter koseri ATCC BAA-895 CKO_00913 -191 4.4 GTTATTGATAATGGTTATT
-185 4.7 GATAATGGTTATTATTCAC
Yersinia pestis KIM y2397 -101 4.4 GTTATTGATAATGGTTATT
-95 4.7 GATAATGGTTATTATTCAC
Position: -157
Score: 4.6
Sequence: CGTTTTAATAATCATTATC
Position: -151
Score: 4.9
Sequence: AATAATCATTATCGTTACC
Locus tag: YpF1991016_2540
YpF1991016_2540 -157 4.6 CGTTTTAATAATCATTATC
-151 4.9 AATAATCATTATCGTTACC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fhuC
Ortholog function: iron-hydroxamate transporter ATP-binding subunit
Escherichia coli str. K-12 substr. MG1655 b0151 -57 4.4 CTTTATAATAATCATTCTC
-51 4.5 AATAATCATTCTCGTTTAC
Salmonella typhimurium LT2 STM0192 -56 4.8 GGTTATAATAATAATTATC
-50 4.8 AATAATAATTATCGTTTAC
Citrobacter koseri ATCC BAA-895 CKO_03217 -57 4 GGTCATAAGAATAATTCTC
-51 4.3 AAGAATAATTCTCGTTTAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00166 -56 4 CGTCATAATAATAATTCTC
-50 4.5 AATAATAATTCTCGTTTAC
Enterobacter sp. 638 Ent638_0691 -58 4.3 GGTCATAATAATAATTCTC
-52 4.5 AATAATAATTCTCGTTTAC
Yersinia pestis KIM y0796 -157 4.4 CGTTTTAATAATCATTATC
-151 4.7 AATAATCATTATCGTTACC
Serratia proteamaculans 568 Spro_3978 -60 4.7 GCTTATAATAATTATTATC
-54 4.7 AATAATTATTATCGTTTAC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3312 -123 4.3 CTTTATCGTAATCATTATC
-117 4.5 CGTAATCATTATCGTTCTC
Position: -84
Score: 4.4
Sequence: CAGAATGATAATCACAATC
Position: -78
Score: 4.3
Sequence: GATAATCACAATCGTTTTA
Locus tag: YpF1991016_3738
YpF1991016_3738 -84 4.4 CAGAATGATAATCACAATC
-78 4.3 GATAATCACAATCGTTTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yijD
Ortholog function: iron permease FTR1
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01045 -76 5 TGTAATGATAATCACTATC
-70 4.2 GATAATCACTATCATAAAT
Enterobacter sp. 638 Ent638_1545 -76 4.9 CGTAATGATAATCACTATC
Erwinia amylovora ATCC 49946 EAM_2059 -80 4.6 GATAATGATAATCCCTATC
Yersinia pestis KIM y2452 -84 4.4 CAGAATGATAATCACAATC
-78 4.3 GATAATCACAATCGTTTTA
Serratia proteamaculans 568 Spro_2929 -109 4.8 CAGAATGATAATCACTATC
Position: -104
Score: 4.6
Sequence: AGGTTTGATAATCATTTTC
Position: -98
Score: 5.2
Sequence: GATAATCATTTTCAATATC
Locus tag: YpF1991016_2332
YpF1991016_2332 -104 4.6 AGGTTTGATAATCATTTTC
-98 5.2 GATAATCATTTTCAATATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: sodA
Ortholog function: manganese/iron superoxide dismutase
Escherichia coli str. K-12 substr. MG1655 b3908 -99 4.7 GGCATTGATAATCATTTTC
-93 5 GATAATCATTTTCAATATC
Salmonella typhimurium LT2 STM4055 -99 4.7 GGCATTGATAATCATTTTC
-93 5 GATAATCATTTTCAATATC
Citrobacter koseri ATCC BAA-895 CKO_03093 -88 4.3 GGCATTGATAAGCATTTTC
-82 4.4 GATAAGCATTTTCAATATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04217 -88 4.3 GGCATTGATAAGCATTTTC
-82 4 GATAAGCATTTTCAATACC
Enterobacter sp. 638 Ent638_4063 -100 4.7 GGCATTGATAATCATTTTC
-94 5 GATAATCATTTTCAATATC
Yersinia pestis KIM y4080 -104 4.4 AGGTTTGATAATCATTTTC
-98 5 GATAATCATTTTCAATATC
Serratia proteamaculans 568 Spro_0081 -105 4.7 GGCATTGATAATCATTTTC
-99 5 GATAATCATTTTCAATATC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0092 -105 4.9 AATAATCATTTTCAATATC
Proteus mirabilis HI4320 PMI3036 -95 4.6 GGATATGATAATGATTTTC
-89 5.2 GATAATGATTTTCATTAAC
Photorhabdus luminescens subsp. laumondii TTO1 plu0075 -102 4.3 GGTATTGATAAGCATTTCC
Position: -48
Score: 4.6
Sequence: GCTTATGATTATCATTTAA
Locus tag: YpF1991016_4618
YpF1991016_4618 -48 4.6 GCTTATGATTATCATTTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hemN1
Ortholog function: coproporphyrinogen III oxidase, iron utilization
Citrobacter koseri ATCC BAA-895 CKO_02656 -45 4.2 GCGAATGATAATGATGATC
-39 4.7 GATAATGATGATCATTTAC
Yersinia pestis KIM y0547 -54 4.1 TCGAATGCTTATGATTATC
-48 4.4 GCTTATGATTATCATTTAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3009 -55 4.2 CCAAATAAAAATAATTATC
-49 4.6 AAAAATAATTATCATTTAA
Edwardsiella tarda EIB202 ETAE_1793 -59 4.4 TCGAATGATAACTATTATC
-53 4.4 GATAACTATTATCATTCAA
Position: -72
Score: 4.7
Sequence: GATAATTATTCTCATTTAA
Locus tag: YpF1991016_2074
YpF1991016_2074 -72 4.7 GATAATTATTCTCATTTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: mntH
Ortholog function: Mn2+/Fe2+ transporter, NRAMP family
Escherichia coli str. K-12 substr. MG1655 b2392 -68 4.7 GAATTTGATAATCATTCTC
-62 4.2 GATAATCATTCTCGTTTGG
Salmonella typhimurium LT2 STM2408 -68 4.5 GCACTTGATAATCATTATC
-62 4.8 GATAATCATTATCAATAAA
Citrobacter koseri ATCC BAA-895 CKO_00404 -50 4.3 GCACTTGATAATCATTCTC
-44 4.5 GATAATCATTCTCAATAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02743 -68 4.3 GAACTTGATAATCATTCGC
-62 4.3 GATAATCATTCGCATTTTG
Enterobacter sp. 638 Ent638_2926 -67 4.8 GATCTTGATAATCATTCTC
-61 4.8 GATAATCATTCTCATTTTG
Yersinia pestis KIM y1500 -78 4 GCGCTTGATAATTATTCTC
-72 4.6 GATAATTATTCTCATTTAA
Serratia proteamaculans 568 Spro_3415 -66 4.3 GCACTTGATAATTATTATC
-60 5.2 GATAATTATTATCATTTAC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0843 -63 4.5 GCACTTGATAATCATTATC
-57 5.2 GATAATCATTATCATTTTT
Edwardsiella tarda EIB202 ETAE_1142 -134 4.5 GCAGTTGATAATCATTATC
Position: -108
Score: 5.1
Sequence: AACAATGATAATCATTTTT
Position: -102
Score: 4.9
Sequence: GATAATCATTTTTATTACC
Locus tag: YpF1991016_2098
YpF1991016_2098 -108 5.1 AACAATGATAATCATTTTT
-102 4.9 GATAATCATTTTTATTACC
Supported by regulated orthologs from reference regulons
Ortholog gene name: sfuA
Ortholog function: iron(III) ABC transporter, periplasmic protein
Yersinia pestis KIM y1526 -108 4.8 AACAATGATAATCATTTTT
-102 4.7 GATAATCATTTTTATTACC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3137 -169 4.2 CGAAATAATAATAACTATC
-163 4.7 AATAATAACTATCATTATT
-157 4.4 AACTATCATTATTATTATC
Position: -62
Score: 5
Sequence: GGTAATAAAAATCATTAGC
Position: -56
Score: 4.5
Sequence: AAAAATCATTAGCATTACT
Locus tag: YpF1991016_4417
YpF1991016_4417 -62 5 GGTAATAAAAATCATTAGC
-56 4.5 AAAAATCATTAGCATTACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fatB
Ortholog function: iron ABC transporter, substrate-binding protein
Yersinia pestis KIM y4043 -26 4.8 GGTAATAAAAATCATTAGC
-20 4.2 AAAAATCATTAGCATTACT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2564 -86 4.2 GCGAATGATAATTAAATTC
-80 4.1 GATAATTAAATTCTTTATT
Proteus mirabilis HI4320 PMI2957 -121 4.1 GTGAATTAGTATCATTACT
Position: -187
Score: 5
Sequence: GAAAATGATAATCGTTTGC
Locus tag: YpF1991016_2957
YpF1991016_2957 -187 5 GAAAATGATAATCGTTTGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: y3404
Ortholog function: TonB-dependent receptor
Yersinia pestis KIM y3404 -187 4.9 GAAAATGATAATCGTTTGC
Position: -95
Score: 4.9
Sequence: AATAGTGGTTATCATTATC
Locus tag: YpF1991016_2982
YpF1991016_2982 -95 4.9 AATAGTGGTTATCATTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: Spro_0923
Ortholog function: major facilitator superfamily MFS_1
Serratia proteamaculans 568 Spro_0923 -93 4.3 AATAATATTTATTGTTATC
Position: -101
Score: 4.7
Sequence: GTTAATAAATCTCATTATT
Position: 30
Score: 4.5
Sequence: GTTAATGATATTCAATCCC
Locus tag: YpF1991016_3890
YpF1991016_3890 -101 4.7 GTTAATAAATCTCATTATT
30 4.5 GTTAATGATATTCAATCCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yijD1
Ortholog function: putative iron permease FTR1
Citrobacter koseri ATCC BAA-895 CKO_02057 -98 5.3 TATAATGATAATAATTATC
-92 5 GATAATAATTATCATTTGT
Yersinia pestis KIM y2370 -47 4.1 GTTAATGTTAATAAATCTC
-41 4.5 GTTAATAAATCTCATTATT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1510 -41 4.7 GATAATAAGAATAAATATC
-35 4.2 AAGAATAAATATCATTTGT
Position: 2
Score: 5
Sequence: GATATTGGTTATGATTATC
Position: 8
Score: 5.4
Sequence: GGTTATGATTATCATTATC
Position: 14
Score: 5.5
Sequence: GATTATCATTATCATTATC
Locus tag: YpF1991016_1807
YpF1991016_1807 2 5 GATATTGGTTATGATTATC
8 5.4 GGTTATGATTATCATTATC
14 5.5 GATTATCATTATCATTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yjjZ
Ortholog function: putative membrane protein
Escherichia coli str. K-12 substr. MG1655 b4567 -60 4.4 GCAAATGATAAAAATTATC
-37 5.2 GATATTGGTTATCATTATC
Salmonella typhimurium LT2 STM4552 -37 5.2 GATATTGGTTATCATTATC
-31 4.2 GGTTATCATTATCAATTCC
Citrobacter koseri ATCC BAA-895 CKO_03427 2 4.9 GCTATTGGTTATCATTATC
8 4.1 GGTTATCATTATCGGTATC
Enterobacter sp. 638 Ent638_0529 -37 5.2 GATATTGGTTATCATTATC
-31 4 GGTTATCATTATCATATTG
Erwinia amylovora ATCC 49946 EAM_0565 -70 4.3 CAAAGTGATAATGATTAAC
-64 4.3 GATAATGATTAACATATGC
-47 4.9 GCTATTGGTAATCATTATC
-41 4.8 GGTAATCATTATCATTTAT
Yersinia pestis KIM y3754 -4 4.9 GATATTGGTTATGATTATC
2 5.2 GGTTATGATTATCATTATC
Serratia proteamaculans 568 Spro_0646 -39 4.7 GATATTAGTTCTCATTATC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0738 -89 5 GATATTAGTTATCATTATC
-83 4.5 AGTTATCATTATCATTTTT
Proteus mirabilis HI4320 PMI2497 -27 5.3 AATAATGAAAATCATTATC
-21 5.2 GAAAATCATTATCATTAAC
Photorhabdus luminescens subsp. laumondii TTO1 plu4253 -92 5.2 GATATTGGTAATCATTATC
-86 4.7 GGTAATCATTATCATTTGT
Position: -339
Score: 5.2
Sequence: GATAATGACAATCATTCTC
Locus tag: YpF1991016_3094
YpF1991016_3094 -339 5.2 GATAATGACAATCATTCTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: adhE
Ortholog function: iron-containing aldehyde-alcohol dehydrogenase
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02199 -332 4 TTTAATGCTAATCGTTTTT
-326 3.2 GCTAATCGTTTTTTTAATT
Yersinia pestis KIM y2023 -339 5 GATAATGACAATCATTCTC
-333 3.7 GAcAATcATtcTCAaaAaa
Serratia proteamaculans 568 Spro_2704 -330 3.9 GTTATCAAGAATGATTCTC
-324 4.2 AAGAATGATTCTCAAAAAC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2326 -368 4.5 CCTAATGATATTGATTATC
-362 5.2 GATATTGATTATCAATATC
Edwardsiella tarda EIB202 ETAE_1508 -317 4 aAagATGAgAtTCATTcTC
-311 4.3 GAgAtTcATtcTCATTAaa
Proteus mirabilis HI4320 PMI1486 -300 4.5 GTAATTAATTATCATTACC
-294 4 AATTATCATTACCATTTAA
Photorhabdus luminescens subsp. laumondii TTO1 plu2496 -191 3.9 ccaAtcaATAATaATTATC
-185 4.4 AATAATAATTATCACTGAC
Position: -48
Score: 4.2
Sequence: GCTAATGGTATTGATAATC
Position: -42
Score: 5.4
Sequence: GGTATTGATAATCATTTTC
Position: -36
Score: 4.9
Sequence: GATAATCATTTTCATTTGT
Locus tag: YpF1991016_1069
YpF1991016_1069 -48 4.2 GCTAATGGTATTGATAATC
-42 5.4 GGTATTGATAATCATTTTC
-36 4.9 GATAATCATTTTCATTTGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sitA
Ortholog function: iron ABC transporter, periplasmic substrate-binding protein
Salmonella typhimurium LT2 STM2861 -99 4.5 GCAAATAAGAATTATTTTC
-93 4.2 AAGAATTATTTTCATTTAT
Citrobacter koseri ATCC BAA-895 CKO_04090 -84 4.5 GTAAATAAGAATTATTTTC
-78 4.2 AAGAATTATTTTCATTTAT
Citrobacter koseri ATCC BAA-895 CKO_00940 -111 4.1 GATAAAGATAATTTTTCTC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03078 -99 4.5 GCAAATAAGAATTATTTTC
-93 4.2 AAGAATTATTTTCATTTAT
Enterobacter sp. 638 Ent638_1111 -98 4.9 TTTAATGATAATTATTTTC
-92 4.5 GATAATTATTTTCATTTAA
Yersinia pestis KIM y1897 -39 5.2 GGTATTGATAATCATTTTC
-33 4.7 GATAATCATTTTCATTTGT
Serratia proteamaculans 568 Spro_2133 -41 5.4 GATATTGATAATCATTTTC
-35 4.6 GATAATCATTTTCATTTGA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2392 -53 5.1 GATATTGATAATTATTCTC
Proteus mirabilis HI4320 PMI1027 -63 4.2 TGAAATGATATTGATAATC
-57 5.5 GATATTGATAATCATTATC
Photorhabdus luminescens subsp. laumondii TTO1 plu2672 -49 5.2 GATATTGATAATCGTTATC
-43 4.5 GATAATCGTTATCATATAC
Position: -331
Score: 4.1
Sequence: TGAAATAAAACTCATTCTT
Position: -325
Score: 4
Sequence: AAAACTCATTCTTATTTAC
Locus tag: YpF1991016_4193
YpF1991016_4193 -331 4.1 TGAAATAAAACTCATTCTT
-325 4 AAAACTCATTCTTATTTAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: bfr
Ortholog function: bacterioferrin
Yersinia pestis KIM y3988 -332 3.9 tgaAATaAaAcTCATTcTt
-326 3.6 aAaAcTcATtcTtATTtaC
Position: -302
Score: 3.7
Sequence: GTGGATGACTATCATTAAA
Position: -289
Score: 4
Sequence: ATTAAACAGACTCATTCTC
Position: -237
Score: 4.2
Sequence: ACCAATAGGAATCATTATC
Position: -231
Score: 4.1
Sequence: AGGAATCATTATCTTTAGT
Position: -204
Score: 4.5
Sequence: AATAATGTGAATGATTATC
Position: -198
Score: 4.2
Sequence: GTGAATGATTATCATGATG
Position: -181
Score: 3.4
Sequence: TGCTTTGGTATTTATTTTC
Position: -175
Score: 4.2
Sequence: GGTATTTATTTTCATTTAA
Locus tag: YpF1991016_4276
YpF1991016_4276 -302 3.7 GTGGATGACTATCATTAAA
-289 4 ATTAAACAGACTCATTCTC
-237 4.2 ACCAATAGGAATCATTATC
-231 4.1 AGGAATCATTATCTTTAGT
-204 4.5 AATAATGTGAATGATTATC
-198 4.2 GTGAATGATTATCATGATG
-181 3.4 TGCTTTGGTATTTATTTTC
-175 4.2 GGTATTTATTTTCATTTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ftnA
Ortholog function: ferritin
Escherichia coli str. K-12 substr. MG1655 b1905 -127 3.4 GgTAATGcgttTtATTccC
-121 3 GcgttTtATtccCATTcgt
Salmonella typhimurium LT2 STM1935 -100 4 AATAATTAAATTTAATATT
Citrobacter koseri ATCC BAA-895 CKO_01042 -97 4.3 AATAATTAAATTTATTATT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02402 -161 4 ATAAATTAAAAGCATTCTC
-155 3.8 TAAAAGCATTCTCATTTAT
Enterobacter sp. 638 Ent638_2486 -103 3.7 TATTTTAATAAATAATATC
-97 3.6 AATAAATAATATCTTTATT
Erwinia amylovora ATCC 49946 EAM_2940 -131 4.4 TGGAATGATTATCAATTAC
Yersinia pestis KIM y2524 -93 4.4 AATAATGTGAATGATTATC
-87 4.1 GTGAATGATTATCATGATG
Serratia proteamaculans 568 Spro_1942 -174 4.5 GAAAATAGTTATCATAATT
-168 4 AGTTATCATAATTATTTAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2473 -158 4.6 TTAAATGATAATGAATATC
-152 4.8 GATAATGAATATCAATAGC
Proteus mirabilis HI4320 PMI1007 -184 4.7 GTTAATGATAATCAATTCC
-178 4.1 GATAATCAATTCCATTAAT
Photorhabdus luminescens subsp. laumondii TTO1 plu2689 -147 4.4 TTAAATGAGATTCATTTTC
-141 4.4 GAGATTCATTTTCATTTTT
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