Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Fur regulog to Pantoea ananatis LMG 20103

Reference regulog properties
Source regulog: Fur - Enterobacteriales
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor (activator)
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Pantoea ananatis LMG 20103
Orthologous TF(s) PANA_1151
Regulated genes 28
Built upon 656 sites [see more]
Predicted regulatory interactions in Pantoea ananatis LMG 20103
Locus tag Position Score Sequence
Position: -29
Score: 4.8
Sequence: GATAACGATAGTCATTTTC
Locus tag: PANA_0069
PANA_0069 -29 4.8 GATAACGATAGTCATTTTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ECA0816
Ortholog function: putative membrane protein
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0816 -49 4.4 ATTAATGATAATGAAAATC
-43 4.5 GATAATGAAAATCATTTCA
Proteus mirabilis HI4320 PMI1869 -220 4.7 GATAATTATACTCATTAAA
-199 4.3 AGTAATATTAATAATTATC
-193 4.1 ATTAATAATTATCTTTCTT
Photorhabdus luminescens subsp. laumondii TTO1 plu2637 -125 4.7 ATAATTGATAATTATTATC
-119 4.9 GATAATTATTATCATTTAT
Position: 8
Score: 4.6
Sequence: GATAATGAGAACTGTTATC
Locus tag: PANA_0349
PANA_0349 8 4.6 GATAATGAGAACTGTTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: iucA2
Ortholog function: aerobactin synthetase (subunit alpha)
Yersinia pestis KIM y3380 -63 4.8 GATAATGATAACCACTATT
Yersinia pestis KIM y3381 -63 4.8 GATAATGATAACCACTATT
Serratia proteamaculans 568 Spro_0922 -63 4.2 GATAACAATAAATATTATT
-45 4.1 TGATATAAGAATCATTCTC
Position: -56
Score: 4.4
Sequence: AAGAATAGTTATCATTTGT
Locus tag: PANA_0383
PANA_0383 -56 4.4 AAGAATAGTTATCATTTGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: feoA
Ortholog function: ferrous iron transport protein A
Escherichia coli str. K-12 substr. MG1655 b3408 -138 3.4 GcTgATagaAAcCATTcTC
-132 4.5 AGAAACCATTCTCATTATC
Salmonella typhimurium LT2 STM3505 -140 3.5 GAagATagaAAcCATTcTC
-133 4.5 AGAAACCATTCTCATTATC
Citrobacter koseri ATCC BAA-895 CKO_04830 -139 4.1 GATGATAAAAACCATTCTC
-133 4.7 AAAAACCATTCTCATTATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03778 -133 4.1 GATGATAAAAACCATTCTC
-127 4.7 AAAAACCATTCTCATTATC
Enterobacter sp. 638 Ent638_3821 -62 4.5 AGAAACCATTCTCATTATC
Yersinia pestis KIM y3912 -118 4.1 GAGCATGAAAATAATTCTC
-112 4.4 GAAAATAATTCTCAGTATT
Serratia proteamaculans 568 Spro_4628 -155 4.3 GAATACGATAATGATTCTC
-149 4.9 GATAATGATTCTCACTATT
Edwardsiella tarda EIB202 ETAE_3283 -163 4.3 GAAAACGATTATCAGTTTT
-157 4.1 GATTATCAGTTTTATTATA
Proteus mirabilis HI4320 PMI2920 -138 4 AAAGATGGTTATAATTCTC
-132 4.3 GGTTATAATTCTCATTTGC
-59 4.8 GTTAATAATTATCAGTATC
-53 4.6 AATTATCAGTATCATTATT
Photorhabdus luminescens subsp. laumondii TTO1 plu0209 -244 4 AATGTTGGTTATTATTCTC
-238 4.2 GGTTATTATTCTCATTTGC
Position: -206
Score: 4.5
Sequence: GATAACCATTCCCATTAGC
Position: -189
Score: 4.6
Sequence: GCATATGATAATAATTCTC
Locus tag: PANA_0611
PANA_0611 -206 4.5 GATAACCATTCCCATTAGC
-189 4.6 GCATATGATAATAATTCTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: hmsT
Ortholog function: diguanylate cyclase, involved in hemin storage
Salmonella typhimurium LT2 STM4551 -238 4 GGAATTGATAATGATAACC
-232 5.1 GATAATGATAACCAATATC
Citrobacter koseri ATCC BAA-895 CKO_03428 -234 4.8 GATAATGATAACCAATAGC
Enterobacter sp. 638 Ent638_0528 -237 5.1 GATAATGATAACCAATATC
Erwinia amylovora ATCC 49946 EAM_0564 -224 4.5 ATAAATGATAATGATTACC
-218 4.8 GATAATGATTACCAATAGC
-201 4.3 GCATATGTTAATCATTATC
-195 4.4 GTTAATCATTATCACTTTG
Yersinia pestis KIM y3756 -275 5 gataatgataatcataacc
-269 4.9 gataatcataaccaatatc
Serratia proteamaculans 568 Spro_0645 -243 4.6 GATAATGAGAACTAATATC
Position: -174
Score: 4.8
Sequence: GGCAATAATTCTCATTTTC
Locus tag: PANA_0639
PANA_0639 -174 4.8 GGCAATAATTCTCATTTTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: foxA
Ortholog function: TonB-dependent siderophore receptor
Salmonella typhimurium LT2 STM0364 -26 4.5 GGTAATAATTCTTATTTAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02304 -98 4.2 AATAATAATTCGCATTACT
Enterobacter sp. 638 Ent638_0493 -45 4.7 GGTAATAATTCTTATTAAC
Erwinia amylovora ATCC 49946 EAM_0358 -123 4.4 AAAAAAGATAATAATTCTC
-117 5 GATAATAATTCTCATTTAC
Serratia proteamaculans 568 Spro_2736 -140 4.9 GATAAAGATAATAATTATC
-134 5.2 GATAATAATTATCATTAAT
Position: -42
Score: 4.3
Sequence: GTTAACGAGAATAATTCTT
Position: -36
Score: 4.4
Sequence: GAGAATAATTCTTATTTCT
Locus tag: PANA_1106
PANA_1106 -42 4.3 GTTAACGAGAATAATTCTT
-36 4.4 GAGAATAATTCTTATTTCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yiuA
Ortholog function: siderophore ABC transporter, substrate binding periplasmic protein
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00520 -54 4.1 GAGAATAATTCTCAGAATC
Enterobacter sp. 638 Ent638_0573 -131 4.4 TCAATTGATAAGCATTATC
Erwinia amylovora ATCC 49946 EAM_2096 -48 4.5 AAGAATGATAATATTTATC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3241 -77 4.2 ATATACGATAATAATTATC
-71 4.7 GATAATAATTATCAAACTC
Position: -204
Score: 4.9
Sequence: GAGAATGATTTTTATTTTT
Locus tag: PANA_1585
PANA_1585 -204 4.9 GAGAATGATTTTTATTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fhuA
Ortholog function: TonB-dependent siderophore receptor
Serratia proteamaculans 568 Spro_3979 -60 4.7 GCTTATAATAATTATTATC
-54 4.7 AATAATTATTATCGTTTAC
Position: 30
Score: 5.2
Sequence: GAATATGATAATTATTATC
Locus tag: PANA_1713
PANA_1713 30 5.2 GAATATGATAATTATTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: EAM_1649
Ortholog function: hypothetical protein
Erwinia amylovora ATCC 49946 EAM_1649 -41 4.7 TAATATGATAATGATTATC
-35 5.5 GATAATGATTATCATTAGC
-29 4 GATTATCATTAGCATAACC
Serratia proteamaculans 568 Spro_2178 24 4.8 AAATATGATAATGATTATC
30 5 GATAATGATTATCATTCAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1858 -43 4.7 TAATATGATAATGATTATC
-37 4.9 GATAATGATTATCATTTCA
Position: -78
Score: 4.7
Sequence: GGTAATGATAATCGGTATC
Locus tag: PANA_2252
PANA_2252 -78 4.7 GGTAATGATAATCGGTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yijD
Ortholog function: iron permease FTR1
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01045 -76 5 TGTAATGATAATCACTATC
-70 4.2 GATAATCACTATCATAAAT
Enterobacter sp. 638 Ent638_1545 -76 4.9 CGTAATGATAATCACTATC
Erwinia amylovora ATCC 49946 EAM_2059 -80 4.6 GATAATGATAATCCCTATC
Yersinia pestis KIM y2452 -84 4.4 CAGAATGATAATCACAATC
-78 4.3 GATAATCACAATCGTTTTA
Serratia proteamaculans 568 Spro_2929 -109 4.8 CAGAATGATAATCACTATC
Position: -73
Score: 4.8
Sequence: TGAATTGATAATTATTATC
Position: -67
Score: 4.1
Sequence: GATAATTATTATCACCTGC
Locus tag: PANA_2550
PANA_2550 -73 4.8 TGAATTGATAATTATTATC
-67 4.1 GATAATTATTATCACCTGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yiuB
Ortholog function: ferric-enterobactin ABC-transporter, permease component
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00519 -54 4.1 GAGAATAATTCTCAGAATC
Enterobacter sp. 638 Ent638_0575 -131 4.4 TCAATTGATAAGCATTATC
Erwinia amylovora ATCC 49946 EAM_2216 -61 4.5 GATAAGTATTATCATTTGC
-10 4 GGTATTGATAATGAGTTTA
Yersinia pestis KIM y2874 -45 4.3 CTTATTGATAAGTATTATC
-39 4.5 GATAAGTATTATCATTTGC
Serratia proteamaculans 568 Spro_3222 -108 4.2 ATGATTGATAAGTATTATC
-102 4.2 GATAAGTATTATCGTTTGC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3242 -77 4.2 ATATACGATAATAATTATC
-71 4.7 GATAATAATTATCAAACTC
Edwardsiella tarda EIB202 ETAE_1965 -75 4.7 GCTAATAATTTTCATTTAC
-53 4.5 AATATTGATATTGATTAGC
-47 4.8 GATATTGATTAGCGTTATC
Proteus mirabilis HI4320 PMI0229 -96 4.8 GATAATGGTAACTATTATC
-90 4.3 GGTAACTATTATCGTTATA
Photorhabdus luminescens subsp. laumondii TTO1 plu2852 -78 4.3 CATATTGATAAGTATTCTC
-72 4 GATAAGTATTCTCATTTGT
Position: -94
Score: 4.7
Sequence: AATAATGATTTCTATTTAC
Locus tag: PANA_2971
PANA_2971 -94 4.7 AATAATGATTTCTATTTAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: eitA
Ortholog function: citrate-dependent iron(III) ABC transporter, peiplasmic component
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02149 -101 4.6 AATAATGAGTTTCATTTGC
Enterobacter sp. 638 Ent638_3205 -73 4.8 TAAAATGAGTTTCATTATC
-67 4.2 GAGTTTCATTATCATTAAA
Position: -47
Score: 4.5
Sequence: GAGAATGATTTCTATTTAC
Locus tag: PANA_3242
PANA_3242 -47 4.5 GAGAATGATTTCTATTTAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yqjH
Ortholog function: FAD-binding 9, siderophore-interacting domain protein
Escherichia coli str. K-12 substr. MG1655 b3070 -71 4.2 ATGATTAACAATCATTATC
-65 4.6 AACAATCATTATCATTTGC
Salmonella typhimurium LT2 STM3214 -62 4.3 AACAATCATTATCATTTAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03499 -62 4.5 GGCAATCATTATCATTTGC
Enterobacter sp. 638 Ent638_3524 -61 4.1 AGCAATCATTATCATTTAA
Position: -150
Score: 3.8
Sequence: CACAATGATAATCGCTCGC
Position: -121
Score: 3.5
Sequence: TGAAATAATTCTTTTTAAA
Locus tag: PANA_3308
PANA_3308 -150 3.8 CACAATGATAATCGCTCGC
-121 3.5 TGAAATAATTCTTTTTAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ftnA
Ortholog function: ferritin
Escherichia coli str. K-12 substr. MG1655 b1905 -127 3.4 GgTAATGcgttTtATTccC
-121 3 GcgttTtATtccCATTcgt
Salmonella typhimurium LT2 STM1935 -100 4 AATAATTAAATTTAATATT
Citrobacter koseri ATCC BAA-895 CKO_01042 -97 4.3 AATAATTAAATTTATTATT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02402 -161 4 ATAAATTAAAAGCATTCTC
-155 3.8 TAAAAGCATTCTCATTTAT
Enterobacter sp. 638 Ent638_2486 -103 3.7 TATTTTAATAAATAATATC
-97 3.6 AATAAATAATATCTTTATT
Erwinia amylovora ATCC 49946 EAM_2940 -131 4.4 TGGAATGATTATCAATTAC
Yersinia pestis KIM y2524 -93 4.4 AATAATGTGAATGATTATC
-87 4.1 GTGAATGATTATCATGATG
Serratia proteamaculans 568 Spro_1942 -174 4.5 GAAAATAGTTATCATAATT
-168 4 AGTTATCATAATTATTTAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2473 -158 4.6 TTAAATGATAATGAATATC
-152 4.8 GATAATGAATATCAATAGC
Proteus mirabilis HI4320 PMI1007 -184 4.7 GTTAATGATAATCAATTCC
-178 4.1 GATAATCAATTCCATTAAT
Photorhabdus luminescens subsp. laumondii TTO1 plu2689 -147 4.4 TTAAATGAGATTCATTTTC
-141 4.4 GAGATTCATTTTCATTTTT
Position: -91
Score: 4.4
Sequence: ACTAATGAGAACCACTATC
Locus tag: PANA_3337
PANA_3337 -91 4.4 ACTAATGAGAACCACTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: exbB
Ortholog function: TonB-dependent siderophore transporter component ExbB
Escherichia coli str. K-12 substr. MG1655 b3006 -82 4.1 AGTAATGAGAACGACTATC
Salmonella typhimurium LT2 STM3159 -82 4.1 AGTAATGAGAACGACTATC
Citrobacter koseri ATCC BAA-895 CKO_04401 -97 4.1 AGTAATGAGAACGACTATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03426 -97 4.3 ACTAATGAGAACCACTATC
Enterobacter sp. 638 Ent638_3417 -97 4.3 ACTAATGAGAACCACTATC
Yersinia pestis KIM y3495 -71 4.8 ACTAATGATAATTACTATC
Serratia proteamaculans 568 Spro_4211 -94 4.4 AATAATGAGAACTACTATC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0358 -206 4.3 AATAATGAGAACGACTATC
Proteus mirabilis HI4320 PMI0029 -170 4.8 AGTAATGATAATTACTATC
Photorhabdus luminescens subsp. laumondii TTO1 plu3941 -98 5.1 AATAATGATAATTACTATC
Position: -53
Score: 4.2
Sequence: AAAAACGATTCGCATTTAC
Locus tag: PANA_3627
PANA_3627 -53 4.2 AAAAACGATTCGCATTTAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: bfd
Ortholog function: bacterioferritin-associated ferredoxin
Escherichia coli str. K-12 substr. MG1655 b3337 -51 3.9 tgaAATaAgAActATTtTC
-45 3.9 aAgAActATttTCATTtat
Salmonella typhimurium LT2 STM3444 -55 4.6 TGTAATCATAACCATTCTC
-49 4.3 CATAACCATTCTCATTTAC
Citrobacter koseri ATCC BAA-895 CKO_04744 -55 4.3 TGTAATCATAACTATTCTC
-49 4.2 CATAACTATTCTCATTTAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03723 -55 4.6 TGTAATCATAACCATTCTC
-49 3.9 cATAAccATtcTCATTtaa
Enterobacter sp. 638 Ent638_3755 -55 4.7 TGTAATCATAATTATTCTC
-49 4.2 CATAATTATTCTCACTTAC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4034 -132 3.9 tgaAATaAaAATaATTcTt
-126 4.4 AAAAATAATTCTTATTTAC
Proteus mirabilis HI4320 PMI3252 -57 4.2 TGAAATAACAATGATTATC
-51 4.8 AACAATGATTATCATTTAC
Photorhabdus luminescens subsp. laumondii TTO1 plu4729 -59 4.4 TGAAATGAGACTCATTATT
-53 3.6 GAgAcTcATtATtATTtaa
Position: -63
Score: 5.4
Sequence: GACAATAATAATCATTATC
Position: -57
Score: 5.2
Sequence: AATAATCATTATCATTCGC
Locus tag: PANA_3708
PANA_3708 -63 5.4 GACAATAATAATCATTATC
-57 5.2 AATAATCATTATCATTCGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yhhY
Ortholog function: GCN5-related N-acetyltransferase
Escherichia coli str. K-12 substr. MG1655 b3441 -119 4.9 GACAATAATAATCATTCTC
-113 4.7 AATAATCATTCTCATTCGC
Erwinia amylovora ATCC 49946 EAM_3278 -118 4.9 GGCAATAATAATCATTATC
-112 4.9 AATAATCATTATCATTCGC
Serratia proteamaculans 568 Spro_4654 -128 4.6 CGCAATAATAATCATTATC
-122 4.7 AATAATCATTATCATTCGT
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