Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Fur regulog to Erwinia pyrifoliae Ep1/96

Reference regulog properties
Source regulog: Fur - Enterobacteriales
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor (activator)
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Erwinia pyrifoliae Ep1/96
Orthologous TF(s) EpC_24610
Regulated genes 20
Built upon 656 sites [see more]
Predicted regulatory interactions in Erwinia pyrifoliae Ep1/96
Locus tag Position Score Sequence
Position: -217
Score: 5.3
Sequence: GATAATGATTACCAATATC
Position: -200
Score: 4.5
Sequence: TCATATGGTAATCATTATC
Position: -194
Score: 4.7
Sequence: GGTAATCATTATCAATTTG
Locus tag: EpC_06080
EpC_06080 -217 5.3 GATAATGATTACCAATATC
-200 4.5 TCATATGGTAATCATTATC
-194 4.7 GGTAATCATTATCAATTTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: hmsT
Ortholog function: diguanylate cyclase, involved in hemin storage
Salmonella typhimurium LT2 STM4551 -238 4 GGAATTGATAATGATAACC
-232 5.1 GATAATGATAACCAATATC
Citrobacter koseri ATCC BAA-895 CKO_03428 -234 4.8 GATAATGATAACCAATAGC
Enterobacter sp. 638 Ent638_0528 -237 5.1 GATAATGATAACCAATATC
Erwinia amylovora ATCC 49946 EAM_0564 -224 4.5 ATAAATGATAATGATTACC
-218 4.8 GATAATGATTACCAATAGC
-201 4.3 GCATATGTTAATCATTATC
-195 4.4 GTTAATCATTATCACTTTG
Yersinia pestis KIM y3756 -275 5 gataatgataatcataacc
-269 4.9 gataatcataaccaatatc
Serratia proteamaculans 568 Spro_0645 -243 4.6 GATAATGAGAACTAATATC
Position: -47
Score: 5.3
Sequence: GATATTGGTAATCATTATC
Locus tag: EpC_06090
EpC_06090 -47 5.3 GATATTGGTAATCATTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yjjZ
Ortholog function: putative membrane protein
Escherichia coli str. K-12 substr. MG1655 b4567 -60 4.4 GCAAATGATAAAAATTATC
-37 5.2 GATATTGGTTATCATTATC
Salmonella typhimurium LT2 STM4552 -37 5.2 GATATTGGTTATCATTATC
-31 4.2 GGTTATCATTATCAATTCC
Citrobacter koseri ATCC BAA-895 CKO_03427 2 4.9 GCTATTGGTTATCATTATC
8 4.1 GGTTATCATTATCGGTATC
Enterobacter sp. 638 Ent638_0529 -37 5.2 GATATTGGTTATCATTATC
-31 4 GGTTATCATTATCATATTG
Erwinia amylovora ATCC 49946 EAM_0565 -70 4.3 CAAAGTGATAATGATTAAC
-64 4.3 GATAATGATTAACATATGC
-47 4.9 GCTATTGGTAATCATTATC
-41 4.8 GGTAATCATTATCATTTAT
Yersinia pestis KIM y3754 -4 4.9 GATATTGGTTATGATTATC
2 5.2 GGTTATGATTATCATTATC
Serratia proteamaculans 568 Spro_0646 -39 4.7 GATATTAGTTCTCATTATC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0738 -89 5 GATATTAGTTATCATTATC
-83 4.5 AGTTATCATTATCATTTTT
Proteus mirabilis HI4320 PMI2497 -27 5.3 AATAATGAAAATCATTATC
-21 5.2 GAAAATCATTATCATTAAC
Photorhabdus luminescens subsp. laumondii TTO1 plu4253 -92 5.2 GATATTGGTAATCATTATC
-86 4.7 GGTAATCATTATCATTTGT
Position: -60
Score: 4.2
Sequence: CGTTATAAGAATAATTATC
Locus tag: EpC_08540
EpC_08540 -60 4.2 CGTTATAAGAATAATTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fhuA
Ortholog function: TonB-dependent siderophore receptor
Escherichia coli str. K-12 substr. MG1655 b0150 -57 4.4 CTTTATAATAATCATTCTC
-51 4.5 AATAATCATTCTCGTTTAC
Salmonella typhimurium LT2 STM0191 -56 4.8 GGTTATAATAATAATTATC
-50 4.8 AATAATAATTATCGTTTAC
Citrobacter koseri ATCC BAA-895 CKO_03218 -57 4 GGTCATAAGAATAATTCTC
-51 4.3 AAGAATAATTCTCGTTTAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00165 -56 4 CGTCATAATAATAATTCTC
-50 4.5 AATAATAATTCTCGTTTAC
Enterobacter sp. 638 Ent638_0690 -58 4.3 GGTCATAATAATAATTCTC
-52 4.5 AATAATAATTCTCGTTTAC
Position: -67
Score: 4.2
Sequence: TATGTTGATAAGTATTATC
Position: -61
Score: 4.7
Sequence: GATAAGTATTATCATTTGC
Locus tag: EpC_13430
EpC_13430 -67 4.2 TATGTTGATAAGTATTATC
-61 4.7 GATAAGTATTATCATTTGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yiuB
Ortholog function: ferric-enterobactin ABC-transporter, permease component
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00519 -54 4.1 GAGAATAATTCTCAGAATC
Enterobacter sp. 638 Ent638_0575 -131 4.4 TCAATTGATAAGCATTATC
Erwinia amylovora ATCC 49946 EAM_2216 -61 4.5 GATAAGTATTATCATTTGC
-10 4 GGTATTGATAATGAGTTTA
Yersinia pestis KIM y2874 -45 4.3 CTTATTGATAAGTATTATC
-39 4.5 GATAAGTATTATCATTTGC
Serratia proteamaculans 568 Spro_3222 -108 4.2 ATGATTGATAAGTATTATC
-102 4.2 GATAAGTATTATCGTTTGC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3242 -77 4.2 ATATACGATAATAATTATC
-71 4.7 GATAATAATTATCAAACTC
Edwardsiella tarda EIB202 ETAE_1965 -75 4.7 GCTAATAATTTTCATTTAC
-53 4.5 AATATTGATATTGATTAGC
-47 4.8 GATATTGATTAGCGTTATC
Proteus mirabilis HI4320 PMI0229 -96 4.8 GATAATGGTAACTATTATC
-90 4.3 GGTAACTATTATCGTTATA
Photorhabdus luminescens subsp. laumondii TTO1 plu2852 -78 4.3 CATATTGATAAGTATTCTC
-72 4 GATAAGTATTCTCATTTGT
Position: -80
Score: 4.8
Sequence: GATAATGATAATCCCTATC
Locus tag: EpC_15070
EpC_15070 -80 4.8 GATAATGATAATCCCTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yijD
Ortholog function: iron permease FTR1
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01045 -76 5 TGTAATGATAATCACTATC
-70 4.2 GATAATCACTATCATAAAT
Enterobacter sp. 638 Ent638_1545 -76 4.9 CGTAATGATAATCACTATC
Erwinia amylovora ATCC 49946 EAM_2059 -80 4.6 GATAATGATAATCCCTATC
Yersinia pestis KIM y2452 -84 4.4 CAGAATGATAATCACAATC
-78 4.3 GATAATCACAATCGTTTTA
Serratia proteamaculans 568 Spro_2929 -109 4.8 CAGAATGATAATCACTATC
Position: -205
Score: 5
Sequence: AGGAATAATAATCATTCTC
Position: -199
Score: 5.1
Sequence: AATAATCATTCTCAATATC
Locus tag: EpC_17030
EpC_17030 -205 5 AGGAATAATAATCATTCTC
-199 5.1 AATAATCATTCTCAATATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: sapA
Ortholog function: ABC peptide transport periplasmic protein
Erwinia amylovora ATCC 49946 EAM_1842 -198 5.1 GTTAATAATAATCATTCTC
-192 5.2 AATAATCATTCTCATTATC
Edwardsiella tarda EIB202 ETAE_1870 -222 4.1 TTGAATGATAATGTTTATC
-216 4.8 GATAATGTTTATCAATATC
Proteus mirabilis HI4320 PMI1378 -131 4.7 GATAATCTTTATCATTAGC
Photorhabdus luminescens subsp. laumondii TTO1 plu2587 -141 4 ACAGATGATAATGGTTATC
-135 4.3 GATAATGGTTATCAATACG
Position: -140
Score: 4.9
Sequence: TTTATTGATAATGATTATC
Position: -134
Score: 5.4
Sequence: GATAATGATTATCATTTGT
Locus tag: EpC_18300
EpC_18300 -140 4.9 TTTATTGATAATGATTATC
-134 5.4 GATAATGATTATCATTTGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hmuR
Ortholog function: TonB-dependent outer membrane receptor
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03087 -133 4 GATAATACCTATCATTACC
Erwinia amylovora ATCC 49946 EAM_1726 -140 4.2 TTTGTTGATAATGATTATC
-134 5.1 GATAATGATTATCATTTGT
Position: -41
Score: 4.9
Sequence: TAATATGATAATGATTATC
Position: -35
Score: 5.8
Sequence: GATAATGATTATCATTAAC
Locus tag: EpC_19090
EpC_19090 -41 4.9 TAATATGATAATGATTATC
-35 5.8 GATAATGATTATCATTAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: EAM_1649
Ortholog function: hypothetical protein
Erwinia amylovora ATCC 49946 EAM_1649 -41 4.7 TAATATGATAATGATTATC
-35 5.5 GATAATGATTATCATTAGC
-29 4 GATTATCATTAGCATAACC
Serratia proteamaculans 568 Spro_2178 24 4.8 AAATATGATAATGATTATC
30 5 GATAATGATTATCATTCAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1858 -43 4.7 TAATATGATAATGATTATC
-37 4.9 GATAATGATTATCATTTCA
Position: -65
Score: 4.3
Sequence: TTTGTTGATAATGATTATC
Position: -59
Score: 5
Sequence: GATAATGATTATCATTCCA
Locus tag: EpC_19140
EpC_19140 -65 4.3 TTTGTTGATAATGATTATC
-59 5 GATAATGATTATCATTCCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hemS
Ortholog function: hemin transport protein
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03088 -133 4 GATAATACCTATCATTACC
Enterobacter sp. 638 Ent638_1740 -50 4.2 TTTGTTGATAATGATTATC
-44 5.1 GATAATGATTATCATTGTT
Erwinia amylovora ATCC 49946 EAM_1642 -65 4.2 TTTGTTGATAATGATTATC
-59 4.8 GATAATGATTATCATTCCA
Yersinia pestis KIM y0542 -48 3.7 GATAATGCTTATCACACTG
-30 4.1 GATAGTCGTTATCATTAAG
Serratia proteamaculans 568 Spro_2168 -68 4 TCACATGATAATGATTCTC
-62 4.6 GATAATGATTCTCACTTTG
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1846 -59 4.7 GAAAATGATTCTCATTCAT
Edwardsiella tarda EIB202 ETAE_1798 -10 4.1 TTATACGATAATGATTATC
-4 5.1 GATAATGATTATCATTAAG
Proteus mirabilis HI4320 PMI1427 -52 5.1 GATAACGATAATGATTATC
-46 5.4 GATAATGATTATCATAATC
-40 4.4 GATTATCATAATCATAACC
Photorhabdus luminescens subsp. laumondii TTO1 plu2633 -54 4.7 TATAACGATAATAATTCTC
-48 4.6 GATAATAATTCTCACTATG
Position: -194
Score: 4.4
Sequence: GATAAAAATAATCACTAAT
Position: -179
Score: 4.4
Sequence: TAATATGATTATTTTTATC
Locus tag: EpC_22130
EpC_22130 -194 4.4 GATAAAAATAATCACTAAT
-179 4.4 TAATATGATTATTTTTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: sdiA
Ortholog function: transcriptional regulator of ftsQAZ gene cluster (LuxR/UhpA family)
Escherichia coli str. K-12 substr. MG1655 b1916 -38 4.4 ATAAATGATACTCACTCTC
Salmonella typhimurium LT2 STM1950 -44 4.4 ATTCATAATAATGATTATC
-38 5.3 AATAATGATTATCAATATC
Citrobacter koseri ATCC BAA-895 CKO_01029 -44 4.4 AAACATTATAATGATTATC
-38 5 TATAATGATTATCAATCTC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02414 -78 4.6 ATTTATAATAATGATTATC
-72 4.4 AATAATGATTATCAATCAG
Enterobacter sp. 638 Ent638_2503 -39 4.2 AATAATGATTAGTTTTTTC
Position: -242
Score: 3.6
Sequence: AGCATTGATTCTCATTTCG
Position: -206
Score: 4.3
Sequence: TTTAATAAGAATGGTTATC
Position: -200
Score: 4
Sequence: AAGAATGGTTATCAAACTT
Position: -194
Score: 3.5
Sequence: GGTTATCAAACTTATTCAA
Position: -149
Score: 4.6
Sequence: TGGAATGATTATCAATTAC
Position: -87
Score: 3.5
Sequence: ATTAAGCGTTTTTATTTGC
Locus tag: EpC_31240
EpC_31240 -242 3.6 AGCATTGATTCTCATTTCG
-206 4.3 TTTAATAAGAATGGTTATC
-200 4 AAGAATGGTTATCAAACTT
-194 3.5 GGTTATCAAACTTATTCAA
-149 4.6 TGGAATGATTATCAATTAC
-87 3.5 ATTAAGCGTTTTTATTTGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ftnA
Ortholog function: ferritin
Escherichia coli str. K-12 substr. MG1655 b1905 -127 3.4 GgTAATGcgttTtATTccC
-121 3 GcgttTtATtccCATTcgt
Salmonella typhimurium LT2 STM1935 -100 4 AATAATTAAATTTAATATT
Citrobacter koseri ATCC BAA-895 CKO_01042 -97 4.3 AATAATTAAATTTATTATT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02402 -161 4 ATAAATTAAAAGCATTCTC
-155 3.8 TAAAAGCATTCTCATTTAT
Enterobacter sp. 638 Ent638_2486 -103 3.7 TATTTTAATAAATAATATC
-97 3.6 AATAAATAATATCTTTATT
Erwinia amylovora ATCC 49946 EAM_2940 -131 4.4 TGGAATGATTATCAATTAC
Yersinia pestis KIM y2524 -93 4.4 AATAATGTGAATGATTATC
-87 4.1 GTGAATGATTATCATGATG
Serratia proteamaculans 568 Spro_1942 -174 4.5 GAAAATAGTTATCATAATT
-168 4 AGTTATCATAATTATTTAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2473 -158 4.6 TTAAATGATAATGAATATC
-152 4.8 GATAATGAATATCAATAGC
Proteus mirabilis HI4320 PMI1007 -184 4.7 GTTAATGATAATCAATTCC
-178 4.1 GATAATCAATTCCATTAAT
Photorhabdus luminescens subsp. laumondii TTO1 plu2689 -147 4.4 TTAAATGAGATTCATTTTC
-141 4.4 GAGATTCATTTTCATTTTT
Position: -35
Score: 5.7
Sequence: GATAATAATAATCATTTTC
Locus tag: EpC_31250
EpC_31250 -35 5.7 GATAATAATAATCATTTTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: EAM_2941
Ortholog function: Fe3+-hydroxamate ABC transporter, periplasmic component
Erwinia amylovora ATCC 49946 EAM_2941 -41 4.1 GAAACTGATAATAATAATC
-35 5.5 GATAATAATAATCATTTTC
-29 4.1 AATAATCATTTTCTTTTGC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3246 -51 5 AATAATGATAACTATTATC
Position: -121
Score: 4.5
Sequence: AAAAAAGATAATAATTCTC
Position: -115
Score: 5.2
Sequence: GATAATAATTCTCATTTAC
Locus tag: EpC_32440
EpC_32440 -121 4.5 AAAAAAGATAATAATTCTC
-115 5.2 GATAATAATTCTCATTTAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: foxA
Ortholog function: TonB-dependent siderophore receptor
Salmonella typhimurium LT2 STM0364 -26 4.5 GGTAATAATTCTTATTTAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02304 -98 4.2 AATAATAATTCGCATTACT
Enterobacter sp. 638 Ent638_0493 -45 4.7 GGTAATAATTCTTATTAAC
Erwinia amylovora ATCC 49946 EAM_0358 -123 4.4 AAAAAAGATAATAATTCTC
-117 5 GATAATAATTCTCATTTAC
Serratia proteamaculans 568 Spro_2736 -140 4.9 GATAAAGATAATAATTATC
-134 5.2 GATAATAATTATCATTAAT
Position: -197
Score: 5
Sequence: AGCAATAATAATCATTATC
Position: -191
Score: 5
Sequence: AATAATCATTATCATTCGT
Locus tag: EpC_34670
EpC_34670 -197 5 AGCAATAATAATCATTATC
-191 5 AATAATCATTATCATTCGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yhhY
Ortholog function: GCN5-related N-acetyltransferase
Escherichia coli str. K-12 substr. MG1655 b3441 -119 4.9 GACAATAATAATCATTCTC
-113 4.7 AATAATCATTCTCATTCGC
Erwinia amylovora ATCC 49946 EAM_3278 -118 4.9 GGCAATAATAATCATTATC
-112 4.9 AATAATCATTATCATTCGC
Serratia proteamaculans 568 Spro_4654 -128 4.6 CGCAATAATAATCATTATC
-122 4.7 AATAATCATTATCATTCGT
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