Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of NagC regulog to Erwinia pyrifoliae Ep1/96

Reference regulog properties
Source regulog: NagC - Enterobacteriales
Regulator type: Transcription factor
Regulator family: ROK
Regulation mode: repressor (activator)
Biological process: N-acetylglucosamine utilization
Effector: N-acetylglucosamine-6-phosphate
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Erwinia pyrifoliae Ep1/96
Orthologous TF(s) EpC_24680
Regulated genes 2
Built upon 68 sites [see more]
Predicted regulatory interactions in Erwinia pyrifoliae Ep1/96
Locus tag Position Score Sequence
Position: -282
Score: 5.4
Sequence: TTTTTTTTGGATCATAAAATAAG
Position: -188
Score: 5.3
Sequence: GTTAATTTGCTATGCAAATTTAT
Locus tag: EpC_24650
EpC_24650 -282 5.4 TTTTTTTTGGATCATAAAATAAG
-188 5.3 GTTAATTTGCTATGCAAATTTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nagE
Ortholog function: PTS system, N-acetylglucosamine-specific IIABC component
Escherichia coli str. K-12 substr. MG1655 b0679 -146 5.9 TTTAATTTGCGATACGAATTAAA
Salmonella typhimurium LT2 STM0685 -241 4.8 GATTTTTTGAATCATAAAATAAG
-147 5.8 TTTAATTTGCGAGGCGAATTAAT
Citrobacter koseri ATCC BAA-895 CKO_02485 -151 6 TTTAATTTGCGATACGAATTAAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00700 -123 6 TTTAATTTGCGATACGAATTAAT
Erwinia amylovora ATCC 49946 EAM_1148 -226 4.8 GATTTTTTGAATCATAAAATAAG
-132 5.4 ATTAATTTGCTGTACGAATTTAT
Serratia proteamaculans 568 Spro_1228 -132 6 TTTAATTTGCGATACGAAATAAT
Photorhabdus luminescens subsp. laumondii TTO1 plu1318 -88 5.3 ATTATTTTTCAACTAAAAATAAG
Position: -226
Score: 5.3
Sequence: ATAAATTTGCATAGCAAATTAAC
Position: -132
Score: 5.4
Sequence: CTTATTTTATGATCCAAAAAAAA
Locus tag: EpC_24660
EpC_24660 -226 5.3 ATAAATTTGCATAGCAAATTAAC
-132 5.4 CTTATTTTATGATCCAAAAAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nagB
Ortholog function: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
Escherichia coli str. K-12 substr. MG1655 b0678 -209 5.9 TTTAATTCGTATCGCAAATTAAA
-115 4.6 CTTATTTTATCATTCAAAAAATC
Salmonella typhimurium LT2 STM0684 -202 5.8 ATTAATTCGCCTCGCAAATTAAA
-108 4.8 CTTATTTTATGATTCAAAAAATC
Citrobacter koseri ATCC BAA-895 CKO_02486 -215 6 ATTAATTCGTATCGCAAATTAAA
-121 4.6 CTTATTTTATCATTCAAAAAATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00699 -214 6 ATTAATTCGTATCGCAAATTAAA
-120 4.6 CTTATTTTATCATTCAAAAAATC
Enterobacter sp. 638 Ent638_1193 -215 6 ATTAATTCGTATCGCAAATTAAA
-121 4.6 CTTATTTTATCATTCAAAAAATC
Erwinia amylovora ATCC 49946 EAM_1147 -225 5.4 ATAAATTCGTACAGCAAATTAAT
-131 4.8 CTTATTTTATGATTCAAAAAATC
Yersinia pestis KIM y1202 -245 6 ATTATTTCGTAACGCAAATTAAA
-151 5.2 CTTATTTTATCATCCGAAAAAAT
Serratia proteamaculans 568 Spro_1227 -225 6 ATTATTTCGTATCGCAAATTAAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1326 -211 5.7 AATAATTCGCTACACAAATTAAA
-118 4.6 CTTATTTCAAGATTAAAAAAAAC
Edwardsiella tarda EIB202 ETAE_2617 -221 5.6 ATTATTTTTCTCCGCAAATTAAA
-127 4.6 CTTATTTTATCATTCGAAAAATC
Proteus mirabilis HI4320 PMI0454 -248 6.1 ATTATTTTGTATCGCAAATTAAT
-154 4.8 CTTATTTTATGATTAAAAATATC
Photorhabdus luminescens subsp. laumondii TTO1 plu1317 -232 5 TTTATTTTTCTTGCAAAAATAAG
-138 4.7 CTTATTTTAATATAAAAAATATC