Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of CcpA regulog to Bacillus sp. SG-1

Reference regulog properties
Source regulog: CcpA - Bacillales
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode:
Biological process: Carbon catabolism
Effector: HPr, phosphocarrier protein
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus sp. SG-1
Orthologous TF(s) BSG1_10058
Regulated genes 23
Built upon 559 sites [see more]
Predicted regulatory interactions in Bacillus sp. SG-1
Locus tag Position Score Sequence
Position: -339
Score: 4
Sequence: ATGAAAACCTCTTCAT
Position: -174
Score: 4.3
Sequence: CTGTAAGCGTTTTATA
Locus tag: BSG1_02365
BSG1_02365 -339 4 ATGAAAACCTCTTCAT
-174 4.3 CTGTAAGCGTTTTATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: odhA
Ortholog function: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Bacillus amyloliquefaciens FZB42 RBAM_019130 -101 4.7 TTGGAAGCGTTTTTAT
Bacillus cereus ATCC 14579 BC1252 -101 4.3 AAGAAAACATTTACAT
Bacillus clausii KSM-K16 ABC2114 -63 4.8 TTGTAAGCGCTTGAAA
Bacillus halodurans C-125 BH2206 -64 5 ATGAAAGCGTTATAAA
Bacillus licheniformis DSM 13 BLi02260 -100 4.3 GTGGAAGCGTTTTTAT
Bacillus pumilus SAFR-032 BPUM_1862 -101 4.7 TTGGAAGCGTTTTATT
Bacillus subtilis subsp. subtilis str. 168 BSU19370 -101 4.7 TTGGAAGCGTTTTTAT
Geobacillus kaustophilus HTA426 GK1023 -123 4.1 GTGAAAACGTTTATAC
Oceanobacillus iheyensis HTE831 OB1089 -51 4.3 TTTGAACCGTTTTCAT
Paenibacillus sp. JDR-2 Pjdr2_4724 -242 4.4 ATGAATACGCTTTAAA
Position: -48
Score: 4.3
Sequence: ATGTAAAGGCTTACTT
Position: 0
Score: 4.4
Sequence: ATGAAAATGCTTACAC
Locus tag: BSG1_00345
BSG1_00345 -48 4.3 ATGTAAAGGCTTACTT
0 4.4 ATGAAAATGCTTACAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fruR
Ortholog function: Transcriptional regulator of fructose utilization, DeoR family
Anoxybacillus flavithermus WK1 Aflv_1478 -24 4.6 ATGTAAGCGATTTAAA
Bacillus amyloliquefaciens FZB42 RBAM_014120 -28 4.5 ATGAATACGTTTCCAA
Bacillus cereus ATCC 14579 BC3720 -46 4.3 TTGTGACCGTTTTCAT
Bacillus licheniformis DSM 13 BLi01652 -29 4.6 ATGAAGGCGTTTCCAA
Bacillus pumilus SAFR-032 BPUM_1334 -30 4.7 ATGAATACGTTTTCAA
Bacillus subtilis subsp. subtilis str. 168 BSU14380 -29 4.7 ATGAATACGTTTTCAT
Oceanobacillus iheyensis HTE831 OB0840 -113 5 TTGAAAGCGTTTTATT
Position: 6
Score: 4.4
Sequence: TTGGAAGCGCTGCCAG
Locus tag: BSG1_10123
BSG1_10123 6 4.4 TTGGAAGCGCTGCCAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: acsA
Ortholog function: Acetyl-coenzyme A synthetase (EC 6.2.1.1)
Anoxybacillus flavithermus WK1 Aflv_0462 237 4.9 ATGAAAGAGTTTTCAA
Bacillus amyloliquefaciens FZB42 RBAM_026800 -102 4.5 TATAAAGCGTTTTCAA
Bacillus clausii KSM-K16 ABC2760 -65 4.7 TTGAAAACGTTACCTT
0 4.8 ATGAAAGCGCTTCCTG
Bacillus halodurans C-125 BH3234 6 4.4 TTGCAAGCGCTTCCAG
Bacillus licheniformis DSM 13 BLi03119 6 4.7 TTGAAAGCGCTGCCAG
Bacillus pumilus SAFR-032 BPUM_2616 -30 4.7 TTGTAAACGTATGCAA
Bacillus subtilis subsp. subtilis str. 168 BSU29680 -101 4.5 TATAAAGCGTTTTCAA
6 4.8 TTGAAAGCGTTACCAG
Oceanobacillus iheyensis HTE831 OB0022 -36 4.5 TTGTAATCGTTTGCAA
Paenibacillus sp. JDR-2 Pjdr2_3796 -56 5 TTGAAAGCGTATTCTT
Position: -150
Score: 4.3
Sequence: ATGTAAACGATTACCT
Locus tag: BSG1_10288
BSG1_10288 -150 4.3 ATGTAAACGATTACCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ackA
Ortholog function: Acetate kinase (EC 2.7.2.1)
Anoxybacillus flavithermus WK1 Aflv_0480 -133 4.4 AAGAAAACGTTTTCGT
Bacillus amyloliquefaciens FZB42 RBAM_026400 -146 4.7 TTGTAAGCGGTACCAA
Bacillus licheniformis DSM 13 BLi03086 -168 4.9 GTGAAAGCGTTAACAT
Bacillus pumilus SAFR-032 BPUM_2579 -180 4.7 ATGTAAGCGGTAACAG
Bacillus subtilis subsp. subtilis str. 168 BSU29470 -156 5.2 TTGTAAGCGTTATCAA
Position: -212
Score: 4.6
Sequence: ATGAAAGCGCATCCCA
Locus tag: BSG1_10428
BSG1_10428 -212 4.6 ATGAAAGCGCATCCCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: mmgD
Ortholog function: Citrate synthase (si) (EC 2.3.3.1)
Anoxybacillus flavithermus WK1 Aflv_0504 -107 4.6 ATGTAAGCATTTTCTT
Anoxybacillus flavithermus WK1 Aflv_0504 -107 4.6 ATGTAAGCATTTTCTT
Bacillus amyloliquefaciens FZB42 RBAM_026180 -114 4.6 ATGTAAGCATTTTCTT
Bacillus amyloliquefaciens FZB42 RBAM_022420 -43 4.6 GTGTAAGCGTTATCTT
Bacillus clausii KSM-K16 ABC1805 -63 4.9 ATGTAAGCGCTTTATT
Bacillus clausii KSM-K16 ABC2715 174 4.6 TTGGAATCGTTTTCAA
Bacillus licheniformis DSM 13 BLi03062 -115 4.6 ATGTAAGCATTTTCTT
Bacillus licheniformis DSM 13 BLi03062 -115 4.6 ATGTAAGCATTTTCTT
Bacillus pumilus SAFR-032 BPUM_2556 -111 4.6 ATGTAAGCATTTTCTT
-69 4.5 TGGATAGCGCTTTCAA
Bacillus pumilus SAFR-032 BPUM_2556 -111 4.6 ATGTAAGCATTTTCTT
-69 4.5 TGGATAGCGCTTTCAA
Bacillus subtilis subsp. subtilis str. 168 BSU24140 -37 4.9 TTGTAAGCGCTGTCTA
Bacillus subtilis subsp. subtilis str. 168 BSU29140 -114 4.6 ATGTAAGCATTTTCTT
Oceanobacillus iheyensis HTE831 OB2269 -39 4.4 TTGACTGCGCTTTCAA
Position: -191
Score: 4.7
Sequence: ATGAAAACGCTTGTAT
Position: -96
Score: 4.1
Sequence: ATATAAACGTATTAAT
Locus tag: BSG1_08021
BSG1_08021 -191 4.7 ATGAAAACGCTTGTAT
-96 4.1 ATATAAACGTATTAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: drm
Ortholog function: Phosphopentomutase (EC 5.4.2.7)
Anoxybacillus flavithermus WK1 Aflv_0998 -114 4.9 ATGAAAACGTTTTATA
Bacillus amyloliquefaciens FZB42 RBAM_021610 -74 4.5 ATGTAAACGGTTTATA
Bacillus cereus ATCC 14579 BC4087 -222 4.5 AAGAAAGCGTAAACAT
Bacillus licheniformis DSM 13 BLi02500 -99 4.1 GTGTAAACGGTTTATA
Bacillus pumilus SAFR-032 BPUM_2081 -82 4.5 TTGTAAACGGTTTATA
Bacillus subtilis subsp. subtilis str. 168 BSU23500 -77 4.7 ATGAAAACGGTTTATA
Position: -277
Score: 4.4
Sequence: TTGTTAGCGGTAACAA
Position: -47
Score: 4.7
Sequence: ATGAAACCGATTACAA
Locus tag: BSG1_07736
BSG1_07736 -277 4.4 TTGTTAGCGGTAACAA
-47 4.7 ATGAAACCGATTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: mutB
Ortholog function: Methylmalonyl-CoA mutase, small subunit (EC 5.4.99.2)
Anoxybacillus flavithermus WK1 Aflv_0965 -39 4.3 AAGAAAGCGTTTTAAC
Position: -272
Score: 4.2
Sequence: ATGTAAGCGGTTTTTG
Position: -259
Score: 4.1
Sequence: TTGTAAGCGTTATTTC
Position: -66
Score: 4.1
Sequence: ATAGAAACGTTTTCGA
Locus tag: BSG1_08806
BSG1_08806 -272 4.2 ATGTAAGCGGTTTTTG
-259 4.1 TTGTAAGCGTTATTTC
-66 4.1 ATAGAAACGTTTTCGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: treP
Ortholog function: PTS system, trehalose-specific enzyme II, BC component (EC 2.7.1.69)
Bacillus amyloliquefaciens FZB42 RBAM_007970 318 4 GTGAAAACGCTTGCGG
Bacillus cereus ATCC 14579 BC0631 234 4.4 TTGATAACGCTTGCAG
Bacillus halodurans C-125 BH2216 136 4.4 TTGAAAGCCTTGACAT
318 4.4 GTGAAAACGCTTGCTG
Bacillus licheniformis DSM 13 BLi00796 318 4.6 GTGAAAACGCTTGCAG
Bacillus subtilis subsp. subtilis str. 168 BSU07800 318 4.6 GTGAAAACGCTTGCAG
Position: -58
Score: 5.2
Sequence: TTGAAAGCGGTATCAA
Locus tag: BSG1_07414
BSG1_07414 -58 5.2 TTGAAAGCGGTATCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: mmgA
Ortholog function: 3-ketoacyl-CoA thiolase [isoleucine degradation] (EC 2.3.1.16)
Anoxybacillus flavithermus WK1 Aflv_2739 -16 4.7 TTGAAAGGGCTTTCTT
Bacillus amyloliquefaciens FZB42 RBAM_022450 -43 4.6 GTGTAAGCGTTATCTT
Bacillus halodurans C-125 BH3801 -65 5 ATGTAAGCGCTTAAAT
Bacillus pumilus SAFR-032 BPUM_3373 -32 4.9 ATGTAAGCGGTAACAA
Bacillus subtilis subsp. subtilis str. 168 BSU24170 -37 4.9 TTGTAAGCGCTGTCTA
Geobacillus kaustophilus HTA426 GK3397 -40 4.6 TTGTAATCGCTTTCTT
Position: -211
Score: 4.4
Sequence: TTGGCAGCGTTTCCAT
Locus tag: BSG1_20920
BSG1_20920 -211 4.4 TTGGCAGCGTTTCCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ywfI
Ortholog function: Predicted heme peroxidase involved in anaerobic stress response
Bacillus amyloliquefaciens FZB42 RBAM_034860 -178 4.5 ATTATAGCGCTTTCAA
Bacillus halodurans C-125 BH3825 -114 4.7 TTTAAAGCGTTTCCAA
Bacillus pumilus SAFR-032 BPUM_3416 -156 4.5 ATTATAGCGCTTACAA
Bacillus subtilis subsp. subtilis str. 168 BSU37670 -200 4.5 ATTATAGCGCTTTCAT
Position: -87
Score: 4.5
Sequence: ATGGAAACGCTGCCAA
Locus tag: BSG1_20925
BSG1_20925 -87 4.5 ATGGAAACGCTGCCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: pta
Ortholog function: Phosphate acetyltransferase (EC 2.3.1.8)
Bacillus amyloliquefaciens FZB42 RBAM_034850 -99 5 TTGAAAGCGCTATAAT
Bacillus clausii KSM-K16 ABC3910 -143 4.3 TTGAAAACCCTTTCCT
-124 4.5 ATGGAAGCGTAATCTA
Bacillus halodurans C-125 BH3823 -194 4.8 TTGGAAACGCTTTAAA
Bacillus licheniformis DSM 13 BLi03997 -104 4.3 GTGTAAACGTTATAAT
Bacillus pumilus SAFR-032 BPUM_3415 -100 4.9 TTGTAAGCGCTATAAT
Bacillus subtilis subsp. subtilis str. 168 BSU37660 -100 5 ATGAAAGCGCTATAAT
-38 4 AAGAAAGCGTTTTTGT
Position: -64
Score: 4.6
Sequence: TAGGAAGCGCTTTCTA
Locus tag: BSG1_09908
BSG1_09908 -64 4.6 TAGGAAGCGCTTTCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: msmX
Ortholog function: Maltose/maltodextrin transport ATP-binding protein (EC 3.6.3.19)
Anoxybacillus flavithermus WK1 Aflv_2303 -30 4.4 ATGAAATCGATTACAT
Bacillus clausii KSM-K16 ABC1514 -48 4.6 ATGAAAGGGGTTACAA
Bacillus halodurans C-125 BH1140 -47 4.6 TTGTAAGCGCTACAAT
Bacillus licheniformis DSM 13 BLi01052 -34 4.6 GTTAAAGCGCTTACAT
Bacillus pumilus SAFR-032 BPUM_0922 -41 4.1 AGTGAAGCGCTTTCAA
Oceanobacillus iheyensis HTE831 OB1134 -37 4.1 ATGTAATCGTTAACAC
Position: -155
Score: 4.3
Sequence: ATGTATACGTTTTCTT
Locus tag: BSG1_00975
BSG1_00975 -155 4.3 ATGTATACGTTTTCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sdhC
Ortholog function: Succinate dehydrogenase cytochrome b558 subunit
Bacillus amyloliquefaciens FZB42 RBAM_025520 -143 4.3 ATGTACACGTTTTCTT
Bacillus cereus ATCC 14579 BC4518 -178 4.3 ATGTATACGTTTTCTT
Bacillus clausii KSM-K16 ABC2664 -190 4.3 TTGAATCCGTTTTCTT
Bacillus licheniformis DSM 13 BLi02994 -143 4.4 ATGTACGCGTTTTCTT
Bacillus pumilus SAFR-032 BPUM_2503 -139 4.2 ATGTACGCGGTTTCTT
Bacillus subtilis subsp. subtilis str. 168 BSU28450 -139 4.4 ATGTACGCGTTTTCTT
Position: -92
Score: 4.5
Sequence: ATGGAAACGTTGCCAA
Locus tag: BSG1_15495
BSG1_15495 -92 4.5 ATGGAAACGTTGCCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ndk
Ortholog function: Nucleoside diphosphate kinase (EC 2.7.4.6)
Anoxybacillus flavithermus WK1 Aflv_1096 -104 4.3 ATTAAATCGTTTTCAT
Bacillus amyloliquefaciens FZB42 RBAM_020890 -37 4.5 TTGAAAGCCTATACAT
Bacillus clausii KSM-K16 ABC1890 -70 4.4 TTGTTAGCGTTTTCCT
Bacillus licheniformis DSM 13 BLi02408 -39 4.5 TTGAAAGCCTATACAT
Bacillus pumilus SAFR-032 BPUM_2004 -43 4.3 ATGTAAGCCTATACAT
Bacillus subtilis subsp. subtilis str. 168 BSU22730 -38 4.1 GTGAAAGCCTATACAT
Geobacillus kaustophilus HTA426 GK2209 -105 4.4 TTATTAGCGCTTTCAA
Position: -35
Score: 4.7
Sequence: ATGAAAACGAATTCAA
Locus tag: BSG1_20650
BSG1_20650 -35 4.7 ATGAAAACGAATTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: mrp
Ortholog function: Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like
Anoxybacillus flavithermus WK1 Aflv_0142 -34 4 GTGAAACCGAATACAT
Bacillus amyloliquefaciens FZB42 RBAM_001800 -32 4.1 TTGTAAACGAATACAC
Bacillus cereus ATCC 14579 BC0168 -84 4.5 ATGTAAACGCATTTAT
Bacillus licheniformis DSM 13 BLi00172 -31 4.5 TTGTAAACGAATACAA
Bacillus pumilus SAFR-032 BPUM_0145 -35 4.6 TTGTAAACGAATTCAA
Bacillus subtilis subsp. subtilis str. 168 BSU01540 -32 4.1 TTGTAAACGAATACAC
Position: -47
Score: 4.8
Sequence: ATGAAAGCGCAGTCTA
Locus tag: BSG1_20165
BSG1_20165 -47 4.8 ATGAAAGCGCAGTCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: sucC
Ortholog function: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Bacillus amyloliquefaciens FZB42 RBAM_015920 -52 4.8 ATGAAAGCGCAGTCTA
Bacillus licheniformis DSM 13 BLi01829 -53 4.8 ATGAAAGCGCAGTCTA
Bacillus pumilus SAFR-032 BPUM_1507 -57 4.8 ATGAAAGCGCAGTCTA
Bacillus subtilis subsp. subtilis str. 168 BSU16090 -51 4.8 ATGAAAGCGCAGTCTA
Geobacillus kaustophilus HTA426 GK1208 -47 4.2 ATGAAAGCGCTAAGAC