Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of ArgR regulog to Sodalis glossinidius str. 'morsitans'

Reference regulog properties
Source regulog: ArgR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: ArgR
Regulation mode: repressor
Biological process: Arginine biosynthesis; Arginine degradation
Effector: Arginine
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Sodalis glossinidius str. 'morsitans'
Orthologous TF(s) SG0359
Regulated genes 5
Built upon 259 sites [see more]
Predicted regulatory interactions in Sodalis glossinidius str. 'morsitans'
Locus tag Position Score Sequence
Position: -66
Score: 5.4
Sequence: ATTGCATAAAAATTCAAA
Locus tag: SG0359
SG0359 -66 5.4 ATTGCATAAAAATTCAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: argR
Ortholog function: arginine repressor
Escherichia coli str. K-12 substr. MG1655 b3237 -62 4.9 TTTGCATAAAAATTCATC
Salmonella typhimurium LT2 STM3360 -64 4.9 TTTGCATAAAAATTCATC
Citrobacter koseri ATCC BAA-895 CKO_04642 -64 4.9 TTTGCATAAAAATTCATC
-44 4 TATGCATAATAATGTTGT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03645 -64 4.8 TTTGCATAAAAATTCATG
Enterobacter sp. 638 Ent638_3672 -63 5.3 TTTGCATAAAAATTCATT
-53 4.1 AATTCATTTACATGCATA
Erwinia amylovora ATCC 49946 EAM_3122 -83 5.3 TTTGCATAAAAATTCATT
-63 4.7 ATTGCATAATAATGTAAA
Yersinia pestis KIM y0667 -66 5 GTTGAATAAAAATTCATT
-56 4.5 AATTCATTTATATGCATA
Serratia proteamaculans 568 Spro_0468 -64 5.4 ATTGCATAAAAATTCATT
-54 4.5 AATTCATTTATATGCATA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0684 -65 5.3 ATTGCATAAAAATTCACA
Edwardsiella tarda EIB202 ETAE_0384 -61 4.9 ATTGCATAAAAATTCACG
Proteus mirabilis HI4320 PMI3399 -64 4.9 GTTGCATAAAAATTCACT
Photorhabdus luminescens subsp. laumondii TTO1 plu4548 -84 3.9 ATTGGCTATAAAATCATT
-63 5.4 ATTGCATAAAAATTCATT
Position: -49
Score: 5.3
Sequence: AATGAATTAATATGCAAA
Locus tag: SG0419
SG0419 -49 5.3 AATGAATTAATATGCAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: carA
Ortholog function: carbamoyl-phosphate synthase small subunit
Escherichia coli str. K-12 substr. MG1655 b0032 -49 5.2 TGTGAATTAATATGCAAA
-28 3.9 AGTGAGTGAATATTCTCT
Salmonella typhimurium LT2 STM0066 -49 5.3 AATGAATTAATATGCAAA
-28 3.9 AGTGAGTGAATATTCTCT
Citrobacter koseri ATCC BAA-895 CKO_03351 -22 5.3 AATGAATTAATATGCAAA
-1 3.9 AGTGAGTGAATATTCTCT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00040 -22 5.2 TATGAATTAATATGCAAA
Enterobacter sp. 638 Ent638_0591 -49 5 TGTGAATTAATATGCAGA
-28 3.9 AGTGAGTGAATATTCTTT
Erwinia amylovora ATCC 49946 EAM_0660 -49 4.5 CCTGAATTAATATGCAGA
Yersinia pestis KIM y3693 -22 5 TATGAATTAATATGCAGA
Serratia proteamaculans 568 Spro_0713 -49 5.1 TCTGAATTAATATGCAAA
-28 3.8 TGTGATTGATTATTCCTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3871 -49 5.1 TCTGAATTAATATGCAAA
Edwardsiella tarda EIB202 ETAE_0593 -128 5 TCTGAATTAATATGCATA
Proteus mirabilis HI4320 PMI0020 -49 4.6 TCTGAATTAATATGCATG
-28 4.4 TGTGATTTATTATTCTCT
Photorhabdus luminescens subsp. laumondii TTO1 plu0603 -49 5.1 TCTGAATTAATATGCACT
Position: -5
Score: 4.2
Sequence: TTTGCATGAGTATTCAAC
Locus tag: SG1096
SG1096 -5 4.2 TTTGCATGAGTATTCAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: artP
Ortholog function: arginine ABC transporter, ATP-binding protein
Escherichia coli str. K-12 substr. MG1655 b0864 -73 4.9 ATTGCATAATTATTCTGT
-5 4 TGTCAATGAGTATTCAAT
Salmonella typhimurium LT2 STM0891 -73 4 ATTGCATAACTATTCTGC
-5 4 TGTCAATGAGTATTCAAT
Citrobacter koseri ATCC BAA-895 CKO_02239 -190 4.5 ATTGCATAACTATTCTGT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00897 -67 4 ATTGCATAACTATTCTGC
Enterobacter sp. 638 Ent638_1380 -79 4.5 ATTGCATAACTATTCTGT
Erwinia amylovora ATCC 49946 EAM_1311 -83 3.8 AATAAATTTTAACGCACA
-62 4.5 ATTGCATAACTATTCTGT
Yersinia pestis KIM y2829 -136 3.7 AGCGCAATCAAATACAAA
-62 4.1 ATTGCATAAGTATGCCGT
Serratia proteamaculans 568 Spro_1656 -83 3.8 AATAAATTTTAACGCACA
-62 4.5 ATTGCATAAGTATTCTGT
-26 4 CATCAATATCTATTCAAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2667 -62 4 ATTGCATAACTATTCTGC
Edwardsiella tarda EIB202 ETAE_2230 -17 4.4 ATTGCATAGTTATTCTGA
Proteus mirabilis HI4320 PMI0682 -85 3.7 AGCAATTTTTTATGCACT
-63 4.4 GTTGCATAATTATTCTCA
-26 4 AGTTAATGACTATTCAAA
-5 4.1 AACGCATGAGTATTCAAT
Photorhabdus luminescens subsp. laumondii TTO1 plu1588 -169 4.2 ATAGAATAAATAAGCTTT
-63 4.8 ATTGCATAATTATACTAA
-5 4.2 AAAGCATGAGTATTCAAT
Position: -51
Score: 5.4
Sequence: AGTGAATTTTAATTCAAT
Locus tag: SG2113
SG2113 -51 5.4 AGTGAATTTTAATTCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: argF
Ortholog function: ornithine carbamoyltransferase
Salmonella typhimurium LT2 STM4469 -66 4.3 AATGAATAATCATCCATA
-45 5.4 AGTGAATTTTAATTCAAT
Yersinia pestis KIM y0740 -111 4.5 ATTGAATATTTATACCTA
-90 5.4 ATTGAATTTAAATTCATA
Serratia proteamaculans 568 Spro_0554 -62 4.8 ATTGAATATTCATACATA
-41 5.5 AGTGAATTTAAATTCAAT
Proteus mirabilis HI4320 PMI3457 -55 4 GATGAATATTTATTGTAT
-34 5.6 ATTGAATATAAATTCAAT
Photorhabdus luminescens subsp. laumondii TTO1 plu4490 -63 4.5 ATTGCATTTTTATAGATA
-42 5.4 ATTGAATTTAAATGCAAA