Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Fur regulog to Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23

Reference regulog properties
Source regulog: Fur - Enterobacteriales
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor (activator)
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23
Orthologous TF(s) Sentent_010100024581
Regulated genes 25
Built upon 656 sites [see more]
Predicted regulatory interactions in Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23
Locus tag Position Score Sequence
Position: -118
Score: 5
Sequence: GGCAATAATAATCATTCTC
Position: -112
Score: 4.9
Sequence: AATAATCATTCTCATTCGC
Locus tag: Sentent_010100000545
Sentent_010100000545 -118 5 GGCAATAATAATCATTCTC
-112 4.9 AATAATCATTCTCATTCGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yhhY
Ortholog function: GCN5-related N-acetyltransferase
Salmonella typhimurium LT2 STM3546 -119 4.7 GGCAATAATAATCATTCTC
-113 4.7 AATAATCATTCTCATTCGC
Position: -37
Score: 5
Sequence: GATAACGATAATTACTATC
Position: -31
Score: 5.2
Sequence: GATAATTACTATCATTATC
Locus tag: Sentent_010100002909
Sentent_010100002909 -37 5 GATAACGATAATTACTATC
-31 5.2 GATAATTACTATCATTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fepD
Ortholog function: iron-enterobactin (enterochelin) ABC transporter membrane protein
Escherichia coli str. K-12 substr. MG1655 b0590 -37 4.8 GATAACGATAATTAATTTC
-31 4.9 GATAATTAATTTCATTATC
Salmonella typhimurium LT2 STM0592 -37 4.8 GATAACGATAATTACTATC
-31 5 GATAATTACTATCATTATC
Citrobacter koseri ATCC BAA-895 CKO_02571 -37 4.8 GATAACGATAATTACTATC
-31 5 GATAATTACTATCATTATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00608 -43 4.8 GATAACGATAATTACTATC
-37 5 GATAATTACTATCATTATC
Enterobacter sp. 638 Ent638_1122 -30 4.8 GATAACGATAATTACTATC
-24 5 GATAATTACTATCATTATC
Serratia proteamaculans 568 Spro_3424 -48 4.4 AATAATGATAATAAAACTC
-42 4.4 GATAATAAAACTCATTTAT
Position: -98
Score: 5
Sequence: GATAATGATAGTAATTATC
Position: -92
Score: 4.9
Sequence: GATAGTAATTATCGTTATC
Locus tag: Sentent_010100002914
Sentent_010100002914 -98 5 GATAATGATAGTAATTATC
-92 4.9 GATAGTAATTATCGTTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ybdA
Ortholog function: enterobactin exporter EntS, MFS family
Escherichia coli str. K-12 substr. MG1655 b0591 -98 4.8 GATAATGAAATTAATTATC
-92 4.9 GAAATTAATTATCGTTATC
Salmonella typhimurium LT2 STM0593 -98 4.9 GATAATGATAGTAATTATC
-92 4.8 GATAGTAATTATCGTTATC
Citrobacter koseri ATCC BAA-895 CKO_02570 -99 4.9 GATAATGATAGTAATTATC
-93 4.8 GATAGTAATTATCGTTATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00609 -94 4.9 GATAATGATAGTAATTATC
-88 4.8 GATAGTAATTATCGTTATC
Enterobacter sp. 638 Ent638_1123 -94 4.9 GATAATGATAGTAATTATC
-88 4.8 GATAGTAATTATCGTTATC
Serratia proteamaculans 568 Spro_3423 -112 4.4 ATAAATGAGTTTTATTATC
-106 4.4 GAGTTTTATTATCATTATT
Position: -160
Score: 4.5
Sequence: TATAATAATGATTATTATT
Position: -157
Score: 4.9
Sequence: AATAATGATTATTATTTCT
Position: -42
Score: 4.7
Sequence: GAAAATGAGAAGCATTAAC
Locus tag: Sentent_010100002924
Sentent_010100002924 -160 4.5 TATAATAATGATTATTATT
-157 4.9 AATAATGATTATTATTTCT
-42 4.7 GAAAATGAGAAGCATTAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fepB
Ortholog function: ferric enterobactin (enterochelin) binding protein; periplasmic component
Salmonella typhimurium LT2 STM0594 -160 4.2 TATAATAATGATTATTATT
-157 4.6 AATAATGATTATTATTTCT
Position: -170
Score: 5.1
Sequence: AGAAATAATAATCATTATT
Locus tag: Sentent_010100002929
Sentent_010100002929 -170 5.1 AGAAATAATAATCATTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: entC
Ortholog function: isochorismate synthetase, siderophore biosynthesis
Escherichia coli str. K-12 substr. MG1655 b0593 -163 4.6 AATAATGCTTCTCATTTTC
-48 5 ATAAATGATAATCATTATT
Salmonella typhimurium LT2 STM0595 -170 4.9 AGAAATAATAATCATTATT
-164 4.4 AATAATCATTATTATACAC
Position: 2
Score: 5.3
Sequence: GATATTGGTTATCATTATC
Locus tag: Sentent_010100006410
Sentent_010100006410 2 5.3 GATATTGGTTATCATTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yjjZ
Ortholog function: putative membrane protein
Escherichia coli str. K-12 substr. MG1655 b4567 -60 4.4 GCAAATGATAAAAATTATC
-37 5.2 GATATTGGTTATCATTATC
Salmonella typhimurium LT2 STM4552 -37 5.2 GATATTGGTTATCATTATC
-31 4.2 GGTTATCATTATCAATTCC
Citrobacter koseri ATCC BAA-895 CKO_03427 2 4.9 GCTATTGGTTATCATTATC
8 4.1 GGTTATCATTATCGGTATC
Enterobacter sp. 638 Ent638_0529 -37 5.2 GATATTGGTTATCATTATC
-31 4 GGTTATCATTATCATATTG
Erwinia amylovora ATCC 49946 EAM_0565 -70 4.3 CAAAGTGATAATGATTAAC
-64 4.3 GATAATGATTAACATATGC
-47 4.9 GCTATTGGTAATCATTATC
-41 4.8 GGTAATCATTATCATTTAT
Yersinia pestis KIM y3754 -4 4.9 GATATTGGTTATGATTATC
2 5.2 GGTTATGATTATCATTATC
Serratia proteamaculans 568 Spro_0646 -39 4.7 GATATTAGTTCTCATTATC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0738 -89 5 GATATTAGTTATCATTATC
-83 4.5 AGTTATCATTATCATTTTT
Proteus mirabilis HI4320 PMI2497 -27 5.3 AATAATGAAAATCATTATC
-21 5.2 GAAAATCATTATCATTAAC
Photorhabdus luminescens subsp. laumondii TTO1 plu4253 -92 5.2 GATATTGGTAATCATTATC
-86 4.7 GGTAATCATTATCATTTGT
Position: -99
Score: 4.9
Sequence: GGCATTGATAATCATTTTC
Position: -93
Score: 5.2
Sequence: GATAATCATTTTCAATATC
Locus tag: Sentent_010100007621
Sentent_010100007621 -99 4.9 GGCATTGATAATCATTTTC
-93 5.2 GATAATCATTTTCAATATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: sodA
Ortholog function: manganese/iron superoxide dismutase
Escherichia coli str. K-12 substr. MG1655 b3908 -99 4.7 GGCATTGATAATCATTTTC
-93 5 GATAATCATTTTCAATATC
Salmonella typhimurium LT2 STM4055 -99 4.7 GGCATTGATAATCATTTTC
-93 5 GATAATCATTTTCAATATC
Citrobacter koseri ATCC BAA-895 CKO_03093 -88 4.3 GGCATTGATAAGCATTTTC
-82 4.4 GATAAGCATTTTCAATATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04217 -88 4.3 GGCATTGATAAGCATTTTC
-82 4 GATAAGCATTTTCAATACC
Enterobacter sp. 638 Ent638_4063 -100 4.7 GGCATTGATAATCATTTTC
-94 5 GATAATCATTTTCAATATC
Yersinia pestis KIM y4080 -104 4.4 AGGTTTGATAATCATTTTC
-98 5 GATAATCATTTTCAATATC
Serratia proteamaculans 568 Spro_0081 -105 4.7 GGCATTGATAATCATTTTC
-99 5 GATAATCATTTTCAATATC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0092 -105 4.9 AATAATCATTTTCAATATC
Proteus mirabilis HI4320 PMI3036 -95 4.6 GGATATGATAATGATTTTC
-89 5.2 GATAATGATTTTCATTAAC
Photorhabdus luminescens subsp. laumondii TTO1 plu0075 -102 4.3 GGTATTGATAAGCATTTCC
Position: -44
Score: 4.8
Sequence: GGTAATAATTCTTATTTAC
Locus tag: Sentent_010100008881
Sentent_010100008881 -44 4.8 GGTAATAATTCTTATTTAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: foxA
Ortholog function: TonB-dependent siderophore receptor
Salmonella typhimurium LT2 STM0364 -26 4.5 GGTAATAATTCTTATTTAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02304 -98 4.2 AATAATAATTCGCATTACT
Enterobacter sp. 638 Ent638_0493 -45 4.7 GGTAATAATTCTTATTAAC
Erwinia amylovora ATCC 49946 EAM_0358 -123 4.4 AAAAAAGATAATAATTCTC
-117 5 GATAATAATTCTCATTTAC
Serratia proteamaculans 568 Spro_2736 -140 4.9 GATAAAGATAATAATTATC
-134 5.2 GATAATAATTATCATTAAT
Position: -68
Score: 4.1
Sequence: CTGATTAACAATCATTATC
Position: -62
Score: 4.5
Sequence: AACAATCATTATCATTTAA
Locus tag: Sentent_010100012998
Sentent_010100012998 -68 4.1 CTGATTAACAATCATTATC
-62 4.5 AACAATCATTATCATTTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yqjH
Ortholog function: FAD-binding 9, siderophore-interacting domain protein
Escherichia coli str. K-12 substr. MG1655 b3070 -71 4.2 ATGATTAACAATCATTATC
-65 4.6 AACAATCATTATCATTTGC
Salmonella typhimurium LT2 STM3214 -62 4.3 AACAATCATTATCATTTAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03499 -62 4.5 GGCAATCATTATCATTTGC
Enterobacter sp. 638 Ent638_3524 -61 4.1 AGCAATCATTATCATTTAA
Position: -104
Score: 5.5
Sequence: GATAATTATTATCATTAGC
Locus tag: Sentent_010100013798
Sentent_010100013798 -104 5.5 GATAATTATTATCATTAGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: iroN
Ortholog function: TonB-dependent siderophore receptor
Salmonella typhimurium LT2 STM2777 -116 4.8 TTGAATGATAATTATTATC
-110 5.2 GATAATTATTATCATTAGC
Position: -70
Score: 5.1
Sequence: GATATTGGTAATTATTATC
Position: -64
Score: 5.3
Sequence: GGTAATTATTATCATTCTC
Locus tag: Sentent_010100013818
Sentent_010100013818 -70 5.1 GATATTGGTAATTATTATC
-64 5.3 GGTAATTATTATCATTCTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: iroB
Ortholog function: putative glycosyl transferase, related to UDP-glucuronosyltransferase
Salmonella typhimurium LT2 STM2773 -70 4.9 GATATTGGTAATTATTATC
-64 5.1 GGTAATTATTATCATTCTC
-58 4.5 TATTATCATTCTCATTAAC
Position: -68
Score: 4.6
Sequence: GCACTTGATAATCATTATC
Position: -62
Score: 4.9
Sequence: GATAATCATTATCAATAAA
Locus tag: Sentent_010100014858
Sentent_010100014858 -68 4.6 GCACTTGATAATCATTATC
-62 4.9 GATAATCATTATCAATAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: mntH
Ortholog function: Mn2+/Fe2+ transporter, NRAMP family
Escherichia coli str. K-12 substr. MG1655 b2392 -68 4.7 GAATTTGATAATCATTCTC
-62 4.2 GATAATCATTCTCGTTTGG
Salmonella typhimurium LT2 STM2408 -68 4.5 GCACTTGATAATCATTATC
-62 4.8 GATAATCATTATCAATAAA
Citrobacter koseri ATCC BAA-895 CKO_00404 -50 4.3 GCACTTGATAATCATTCTC
-44 4.5 GATAATCATTCTCAATAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02743 -68 4.3 GAACTTGATAATCATTCGC
-62 4.3 GATAATCATTCGCATTTTG
Enterobacter sp. 638 Ent638_2926 -67 4.8 GATCTTGATAATCATTCTC
-61 4.8 GATAATCATTCTCATTTTG
Yersinia pestis KIM y1500 -78 4 GCGCTTGATAATTATTCTC
-72 4.6 GATAATTATTCTCATTTAA
Serratia proteamaculans 568 Spro_3415 -66 4.3 GCACTTGATAATTATTATC
-60 5.2 GATAATTATTATCATTTAC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0843 -63 4.5 GCACTTGATAATCATTATC
-57 5.2 GATAATCATTATCATTTTT
Edwardsiella tarda EIB202 ETAE_1142 -134 4.5 GCAGTTGATAATCATTATC
Position: -66
Score: 4.8
Sequence: TGAAGTGATAATCATTATC
Position: -60
Score: 5.2
Sequence: GATAATCATTATCACTAAC
Locus tag: Sentent_010100020967
Sentent_010100020967 -66 4.8 TGAAGTGATAATCATTATC
-60 5.2 GATAATCATTATCACTAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: sufA
Ortholog function: scaffold protein for iron-sulfur cluster assembly
Escherichia coli str. K-12 substr. MG1655 b1684 -65 4.4 TGAACTGATAATCATTATC
-59 5.1 GATAATCATTATCACTAAC
Salmonella typhimurium LT2 STM1369 -66 4.7 TGAAGTGATAATCATTATC
-60 5.1 GATAATCATTATCACTAAC
Citrobacter koseri ATCC BAA-895 CKO_01717 -66 4.7 TGAAGTGATAATCATTATC
-60 5.1 GATAATCATTATCACTAAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02141 -66 4.7 TGAAGTGATAATCATTATC
-60 5.1 GATAATCATTATCACTAAC
Enterobacter sp. 638 Ent638_1760 -67 4.4 TGAAGTGATAATCGTTATC
-61 4.7 GATAATCGTTATCACTAAC
Yersinia pestis KIM y1934 -129 4.5 TGAAGTGATAATTATTATC
-123 4.8 GATAATTATTATCACTACC
Serratia proteamaculans 568 Spro_2179 -77 4.4 TGAAGTGATAATCGTTATC
-71 4.7 GATAATCGTTATCACTAAC
Proteus mirabilis HI4320 PMI1416 -66 4.4 GATAAGGGTTATCATTACC
-60 4 GGTTATCATTACCATTAGA
Photorhabdus luminescens subsp. laumondii TTO1 plu2622 -87 4.4 GATAAAGGTTATCATTACC
-81 4.3 GGTTATCATTACCATTATA
Position: -47
Score: 4.6
Sequence: ATTATTGATAATAATAATC
Position: -41
Score: 4.8
Sequence: GATAATAATAATCATTGTG
Locus tag: Sentent_010100021107
Sentent_010100021107 -47 4.6 ATTATTGATAATAATAATC
-41 4.8 GATAATAATAATCATTGTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: hemP
Ortholog function: hemin uptake protein
Escherichia coli str. K-12 substr. MG1655 b1705 -47 4.1 AATATTGATAATAAGAATC
-41 4.6 GATAATAAGAATCATTGTT
Salmonella typhimurium LT2 STM1346 -47 4.5 ATTATTGATAATAATAATC
-41 4.7 GATAATAATAATCATTGTG
Citrobacter koseri ATCC BAA-895 CKO_01729 -50 4.7 AATATTGATAATAATAATC
-44 4.9 GATAATAATAATCATTGTT
Citrobacter koseri ATCC BAA-895 CKO_03737 14 4.1 CTTGATGATAATCATTCTT
20 4.8 GATAATCATTCTTGTTATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02163 -10 4.8 ATTATTGATAATGATTATC
-4 5.1 GATAATGATTATCATTGTT
Enterobacter sp. 638 Ent638_1742 -50 4.2 TTTGTTGATAATGATTATC
-44 5.1 GATAATGATTATCATTGTT
Serratia proteamaculans 568 Spro_2170 -68 4 TCACATGATAATGATTCTC
-62 4.6 GATAATGATTCTCACTTTG
Edwardsiella tarda EIB202 ETAE_1796 -10 4.1 TTATACGATAATGATTATC
-4 5.1 GATAATGATTATCATTAAG
Proteus mirabilis HI4320 PMI1424 -52 5.1 GATAACGATAATGATTATC
-46 5.4 GATAATGATTATCATAATC
-40 4.4 GATTATCATAATCATAACC
Photorhabdus luminescens subsp. laumondii TTO1 plu2631 -54 4.7 TATAACGATAATAATTCTC
-48 4.6 GATAATAATTCTCACTATG
Position: -44
Score: 4.6
Sequence: ATTCATAATAATGATTATC
Position: -38
Score: 5.5
Sequence: AATAATGATTATCAATATC
Locus tag: Sentent_010100022891
Sentent_010100022891 -44 4.6 ATTCATAATAATGATTATC
-38 5.5 AATAATGATTATCAATATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: sdiA
Ortholog function: transcriptional regulator of ftsQAZ gene cluster (LuxR/UhpA family)
Escherichia coli str. K-12 substr. MG1655 b1916 -38 4.4 ATAAATGATACTCACTCTC
Salmonella typhimurium LT2 STM1950 -44 4.4 ATTCATAATAATGATTATC
-38 5.3 AATAATGATTATCAATATC
Citrobacter koseri ATCC BAA-895 CKO_01029 -44 4.4 AAACATTATAATGATTATC
-38 5 TATAATGATTATCAATCTC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02414 -78 4.6 ATTTATAATAATGATTATC
-72 4.4 AATAATGATTATCAATCAG
Enterobacter sp. 638 Ent638_2503 -39 4.2 AATAATGATTAGTTTTTTC
Position: -82
Score: 5
Sequence: TATAATGATACGCATTATC
Locus tag: Sentent_010100024581
Sentent_010100024581 -82 5 TATAATGATACGCATTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fur
Ortholog function: ferric uptake transcription regulator
Escherichia coli str. K-12 substr. MG1655 b0683 -83 4.9 TATAATGATACGCATTATC
Salmonella typhimurium LT2 STM0693 -82 4.9 TATAATGATACGCATTATC
Enterobacter sp. 638 Ent638_1198 -83 4.5 TATAATGAAACGCATTATC
Edwardsiella tarda EIB202 ETAE_2610 -193 4.4 TATAATGAATCTCACTATT
Proteus mirabilis HI4320 PMI0543 -179 4.2 AATATTGAGAATGATAATT
-173 4.5 GAGAATGATAATTATTCAA
Photorhabdus luminescens subsp. laumondii TTO1 plu1327 -106 4.2 GGTTTTCATTTTCATTAGC
Position: -201
Score: 5.1
Sequence: TAAATTGATAATTATTATC
Position: -195
Score: 4.9
Sequence: GATAATTATTATCGTTTGC
Locus tag: Sentent_010100025940
Sentent_010100025940 -201 5.1 TAAATTGATAATTATTATC
-195 4.9 GATAATTATTATCGTTTGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: cirA
Ortholog function: TonB-dependent ferric iron-catecholate receptor
Salmonella typhimurium LT2 STM2199 -201 4.9 TAAATTGATAATTATTATC
-195 4.8 GATAATTATTATCGTTTGC
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