Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of ArgR regulog to Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29

Reference regulog properties
Source regulog: ArgR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: ArgR
Regulation mode: repressor
Biological process: Arginine biosynthesis; Arginine degradation
Effector: Arginine
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29
Orthologous TF(s) Sentente_010100020798
Regulated genes 11
Built upon 259 sites [see more]
Predicted regulatory interactions in Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29
Locus tag Position Score Sequence
Position: -140
Score: 4.1
Sequence: AATGCATACTTAATCGAT
Position: -129
Score: 4.1
Sequence: AATCGATTTTTATGCAAA
Locus tag: Sentente_010100003979
Sentente_010100003979 -140 4.1 AATGCATACTTAATCGAT
-129 4.1 AATCGATTTTTATGCAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hisJ
Ortholog function: histidine ABC transporter, substrate-binding protein
Escherichia coli str. K-12 substr. MG1655 b2309 -151 4.2 GGTGCATTGAAATGCATA
-141 4.3 AATGCATACTTAAGCATT
-131 3.8 TAAGCATTTTTAATGAAA
-120 3.7 AATGAAAAATAATACGTC
Salmonella typhimurium LT2 STM2354 -140 4.1 AATGCATACTTAATCGAT
-129 4.1 AATCGATTTTTATGCAAA
Citrobacter koseri ATCC BAA-895 CKO_00478 -142 3.9 AATGCATACTTAAGCGCT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02699 -143 3.9 AATGCATAGTTAAGCGTT
Enterobacter sp. 638 Ent638_2858 -140 3.9 GGTGCATAGTTAAGCACT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3050 -227 4.2 AAAGATTTTATAATCAAA
Position: -73
Score: 4
Sequence: ATTGCATAACTATTCTGC
Position: -5
Score: 4
Sequence: TGTCAATGAGTATTCAAT
Locus tag: Sentente_010100007864
Sentente_010100007864 -73 4 ATTGCATAACTATTCTGC
-5 4 TGTCAATGAGTATTCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: artP
Ortholog function: arginine ABC transporter, ATP-binding protein
Escherichia coli str. K-12 substr. MG1655 b0864 -73 4.9 ATTGCATAATTATTCTGT
-5 4 TGTCAATGAGTATTCAAT
Salmonella typhimurium LT2 STM0891 -73 4 ATTGCATAACTATTCTGC
-5 4 TGTCAATGAGTATTCAAT
Citrobacter koseri ATCC BAA-895 CKO_02239 -190 4.5 ATTGCATAACTATTCTGT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00897 -67 4 ATTGCATAACTATTCTGC
Enterobacter sp. 638 Ent638_1380 -79 4.5 ATTGCATAACTATTCTGT
Erwinia amylovora ATCC 49946 EAM_1311 -83 3.8 AATAAATTTTAACGCACA
-62 4.5 ATTGCATAACTATTCTGT
Yersinia pestis KIM y2829 -136 3.7 AGCGCAATCAAATACAAA
-62 4.1 ATTGCATAAGTATGCCGT
Serratia proteamaculans 568 Spro_1656 -83 3.8 AATAAATTTTAACGCACA
-62 4.5 ATTGCATAAGTATTCTGT
-26 4 CATCAATATCTATTCAAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2667 -62 4 ATTGCATAACTATTCTGC
Edwardsiella tarda EIB202 ETAE_2230 -17 4.4 ATTGCATAGTTATTCTGA
Proteus mirabilis HI4320 PMI0682 -85 3.7 AGCAATTTTTTATGCACT
-63 4.4 GTTGCATAATTATTCTCA
-26 4 AGTTAATGACTATTCAAA
-5 4.1 AACGCATGAGTATTCAAT
Photorhabdus luminescens subsp. laumondii TTO1 plu1588 -169 4.2 ATAGAATAAATAAGCTTT
-63 4.8 ATTGCATAATTATACTAA
-5 4.2 AAAGCATGAGTATTCAAT
Position: -82
Score: 5.1
Sequence: ATTGCATACAAATTCAAT
Locus tag: Sentente_010100007884
Sentente_010100007884 -82 5.1 ATTGCATACAAATTCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: artJ
Ortholog function: arginine ABC transporter, substrate-binding protein
Escherichia coli str. K-12 substr. MG1655 b0860 -115 3.8 ATTTCATTTAAATTATTT
-87 5.4 ATTGCATATAAATTCACT
Salmonella typhimurium LT2 STM0887 -103 4 TTAAAATATTTAATCATT
-82 5.1 ATTGCATACAAATTCAAT
Citrobacter koseri ATCC BAA-895 CKO_02243 -87 5.4 ATTGCATATAAATTCATT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00893 -87 5.4 ATTGCATATAAATTCATT
Enterobacter sp. 638 Ent638_1376 -85 5.1 ATTGCATACAAATTCAAT
Erwinia amylovora ATCC 49946 EAM_1307 -83 3.8 AATAAATTTTAACGCACA
-62 4.5 ATTGCATAACTATTCTGT
Yersinia pestis KIM y2844 -130 4.3 TTTAAATTTTTAATCACA
-109 4.8 CTTGCATATAAATTCATA
Serratia proteamaculans 568 Spro_1652 -151 3.9 AACAAATTTTTAATCATT
-130 5.4 ATTGCATATTAATTCATT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2671 -138 3.9 GATGTAAAAACATGCAAT
-118 4.1 ATCGATTTATTAATCATT
-97 5.5 ATTGCATATAAATTCAAT
Edwardsiella tarda EIB202 ETAE_2234 -168 3.8 AAAATATATTTATACATA
-147 5 ATTGCATAACAATTCACT
Position: -49
Score: 5.3
Sequence: AATGAATTAATATGCAAA
Locus tag: Sentente_010100009735
Sentente_010100009735 -49 5.3 AATGAATTAATATGCAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: carA
Ortholog function: carbamoyl-phosphate synthase small subunit
Escherichia coli str. K-12 substr. MG1655 b0032 -49 5.2 TGTGAATTAATATGCAAA
-28 3.9 AGTGAGTGAATATTCTCT
Salmonella typhimurium LT2 STM0066 -49 5.3 AATGAATTAATATGCAAA
-28 3.9 AGTGAGTGAATATTCTCT
Citrobacter koseri ATCC BAA-895 CKO_03351 -22 5.3 AATGAATTAATATGCAAA
-1 3.9 AGTGAGTGAATATTCTCT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00040 -22 5.2 TATGAATTAATATGCAAA
Enterobacter sp. 638 Ent638_0591 -49 5 TGTGAATTAATATGCAGA
-28 3.9 AGTGAGTGAATATTCTTT
Erwinia amylovora ATCC 49946 EAM_0660 -49 4.5 CCTGAATTAATATGCAGA
Yersinia pestis KIM y3693 -22 5 TATGAATTAATATGCAGA
Serratia proteamaculans 568 Spro_0713 -49 5.1 TCTGAATTAATATGCAAA
-28 3.8 TGTGATTGATTATTCCTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3871 -49 5.1 TCTGAATTAATATGCAAA
Edwardsiella tarda EIB202 ETAE_0593 -128 5 TCTGAATTAATATGCATA
Proteus mirabilis HI4320 PMI0020 -49 4.6 TCTGAATTAATATGCATG
-28 4.4 TGTGATTTATTATTCTCT
Photorhabdus luminescens subsp. laumondii TTO1 plu0603 -49 5.1 TCTGAATTAATATGCACT
Position: -45
Score: 5.4
Sequence: AGTGAATTTTAATTCAAT
Locus tag: Sentente_010100012382
Sentente_010100012382 -45 5.4 AGTGAATTTTAATTCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: argF
Ortholog function: ornithine carbamoyltransferase
Salmonella typhimurium LT2 STM4469 -66 4.3 AATGAATAATCATCCATA
-45 5.4 AGTGAATTTTAATTCAAT
Yersinia pestis KIM y0740 -111 4.5 ATTGAATATTTATACCTA
-90 5.4 ATTGAATTTAAATTCATA
Serratia proteamaculans 568 Spro_0554 -62 4.8 ATTGAATATTCATACATA
-41 5.5 AGTGAATTTAAATTCAAT
Proteus mirabilis HI4320 PMI3457 -55 4 GATGAATATTTATTGTAT
-34 5.6 ATTGAATATAAATTCAAT
Photorhabdus luminescens subsp. laumondii TTO1 plu4490 -63 4.5 ATTGCATTTTTATAGATA
-42 5.4 ATTGAATTTAAATGCAAA
Position: -41
Score: 5
Sequence: TATGAATAAAAATACATT
Locus tag: Sentente_010100012889
Sentente_010100012889 -41 5 TATGAATAAAAATACATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: argC
Ortholog function: N-acetyl-gamma-glutamyl-phosphate reductase
Escherichia coli str. K-12 substr. MG1655 b3958 -127 4.1 TATCAATATTCATGCAGT
-106 5 TATGAATAAAAATACACT
Salmonella typhimurium LT2 STM4121 -62 4.2 TATCAATATTCATGCATT
-41 5 TATGAATAAAAATACATT
Citrobacter koseri ATCC BAA-895 CKO_03036 -128 4.2 TATCAATATTCATGCATT
-107 5 TGTGAATAAAAATACATT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04247 -87 4.2 TATCAATATTCATGCATT
-66 5.3 TTTGAATAAAAATACAAT
Enterobacter sp. 638 Ent638_4028 -62 4.2 TATCAATATTCATGCACT
-41 5 TGTGAATAAAAATACACT
Yersinia pestis KIM y0310 -219 4.1 TATCAATATTCATGCAGT
-198 4.9 TATGAATAAAAATACAGT
-65 4.5 TATGTTTTTATATGCATA
Serratia proteamaculans 568 Spro_4781 -185 4.2 TATCAATATTCATGCATT
-164 5.1 TGTGAATAAAAATACAAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0192 -177 4.2 TATCAATATTCATGCATT
-156 5.3 TTTGAATAAAAATACAAT
Edwardsiella tarda EIB202 ETAE_3482 -178 4.3 TATCAATATTCATGCAAT
-157 5.2 TATGAATAAAAATACAAT
Proteus mirabilis HI4320 PMI3237 -75 4.2 TATCAATATTCATGCACT
-54 5.2 TTTGAATAAAAATACATT
Photorhabdus luminescens subsp. laumondii TTO1 plu4744 -77 4.2 TATCAATATTCATGCATT
-56 5.2 TTTGAATAAAAATACATT
Position: -65
Score: 5
Sequence: AATGTATTTTTATTCATA
Locus tag: Sentente_010100012894
Sentente_010100012894 -65 5 AATGTATTTTTATTCATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: argE
Ortholog function: acetylornithine deacetylase
Escherichia coli str. K-12 substr. MG1655 b3957 -65 5 AGTGTATTTTTATTCATA
-44 4.1 ACTGCATGAATATTGATA
Salmonella typhimurium LT2 STM4120 -65 5 AATGTATTTTTATTCATA
-44 4.2 AATGCATGAATATTGATA
Citrobacter koseri ATCC BAA-895 CKO_03037 -26 5 AATGTATTTTTATTCACA
-5 4.2 AaTGcATgaATATTgAta
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04246 -26 5.3 ATTGTATTTTTATTCAAA
-4 4.2 AaTGcATgaATATTgAta
Enterobacter sp. 638 Ent638_4029 -65 5 AGTGTATTTTTATTCACA
-44 4.2 AGTGCATGAATATTGATA
Erwinia amylovora ATCC 49946 EAM_0137 -65 5.2 ATTGTATTTTTATTCACT
-44 4.2 AATGCATGAATATTGATA
Yersinia pestis KIM y0309 -197 4.5 TATGCATATAAAAACATA
-64 4.9 ACTGTATTTTTATTCATA
-43 4.1 ACTGCATGAATATTGATA
Serratia proteamaculans 568 Spro_4782 -70 5.1 ATTGTATTTTTATTCACA
-49 4.2 AATGCATGAATATTGATA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0191 -64 5.3 ATTGTATTTTTATTCAAA
-43 4.2 AATGCATGAATATTGATA
Edwardsiella tarda EIB202 ETAE_3483 -64 5.2 ATTGTATTTTTATTCATA
-43 4.3 ATTGCATGAATATTGATA
Proteus mirabilis HI4320 PMI3236 -64 5.2 AATGTATTTTTATTCAAA
-43 4.2 AGTGCATGAATATTGATA
Photorhabdus luminescens subsp. laumondii TTO1 plu4745 -64 5.2 AATGTATTTTTATTCAAA
-43 4.2 AATGCATGAATATTGATA
Position: -67
Score: 5.2
Sequence: TTTGCATAAAAATGCACT
Locus tag: Sentente_010100016347
Sentente_010100016347 -67 5.2 TTTGCATAAAAATGCACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: argG
Ortholog function: argininosuccinate synthase
Escherichia coli str. K-12 substr. MG1655 b3172 -145 4.1 AGCGCATTATTTTACAAA
-69 5.2 TTTGCATAAAAATTCAGT
Salmonella typhimurium LT2 STM3290.S -67 5.2 TTTGCATAAAAATGCACT
Citrobacter koseri ATCC BAA-895 CKO_04574 -68 5.2 TTTGCATAAAAATGCACT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03580 -69 5.1 AATGCATAAAAATGCAGT
Enterobacter sp. 638 Ent638_3608 -67 4.9 TTTGCATAAACATGCAAA
Erwinia amylovora ATCC 49946 EAM_0139 -139 4.2 TATCAATATTCATGCATT
-118 5.2 AGTGAATAAAAATACAAT
Yersinia pestis KIM y2595 -104 4.6 AATCCATAAATATGCAAA
Serratia proteamaculans 568 Spro_4779 -185 4.2 TATCAATATTCATGCATT
-164 5.1 TGTGAATAAAAATACAAT
Edwardsiella tarda EIB202 ETAE_3480 -178 4.3 TATCAATATTCATGCAAT
-157 5.2 TATGAATAAAAATACAAT
Proteus mirabilis HI4320 PMI3239 -75 4.2 TATCAATATTCATGCACT
-54 5.2 TTTGAATAAAAATACATT
Photorhabdus luminescens subsp. laumondii TTO1 plu4742 -77 4.2 TATCAATATTCATGCATT
-56 5.2 TTTGAATAAAAATACATT
Position: -234
Score: 4.3
Sequence: ACTGAATAATATTTCGCT
Locus tag: Sentente_010100017811
Sentente_010100017811 -234 4.3 ACTGAATAATATTTCGCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: astC
Ortholog function: acetylornithine and succinylornithine aminotransferase
Escherichia coli str. K-12 substr. MG1655 b1748 -233 3.7 TCTGCATAACATTGCGTT
-192 3.6 ATCGCAAACGTATTCACT
-181 4.2 ATTCACTTTATATGCACT
Salmonella typhimurium LT2 STM1303 -234 4.3 ACTGAATAATATTTCGCT
-182 3.7 ATTCACTTTTCATGCAGT
Citrobacter koseri ATCC BAA-895 CKO_01774 -233 4.4 ACTGAATAATATTTCGAT
-192 4.4 TTCGCAAATATATTCACT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01221 -182 4.2 ATTCACTAAATATGCATT
Enterobacter sp. 638 Ent638_1696 -234 4.3 TGTGAATAATATTTCTGT
-192 4.1 GCTGTAAAAATATTCACT
-181 4.2 ATTCACTTATTATGCATT
Position: -64
Score: 4.9
Sequence: TTTGCATAAAAATTCATC
Locus tag: Sentente_010100020798
Sentente_010100020798 -64 4.9 TTTGCATAAAAATTCATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: argR
Ortholog function: arginine repressor
Escherichia coli str. K-12 substr. MG1655 b3237 -62 4.9 TTTGCATAAAAATTCATC
Salmonella typhimurium LT2 STM3360 -64 4.9 TTTGCATAAAAATTCATC
Citrobacter koseri ATCC BAA-895 CKO_04642 -64 4.9 TTTGCATAAAAATTCATC
-44 4 TATGCATAATAATGTTGT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03645 -64 4.8 TTTGCATAAAAATTCATG
Enterobacter sp. 638 Ent638_3672 -63 5.3 TTTGCATAAAAATTCATT
-53 4.1 AATTCATTTACATGCATA
Erwinia amylovora ATCC 49946 EAM_3122 -83 5.3 TTTGCATAAAAATTCATT
-63 4.7 ATTGCATAATAATGTAAA
Yersinia pestis KIM y0667 -66 5 GTTGAATAAAAATTCATT
-56 4.5 AATTCATTTATATGCATA
Serratia proteamaculans 568 Spro_0468 -64 5.4 ATTGCATAAAAATTCATT
-54 4.5 AATTCATTTATATGCATA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0684 -65 5.3 ATTGCATAAAAATTCACA
Edwardsiella tarda EIB202 ETAE_0384 -61 4.9 ATTGCATAAAAATTCACG
Proteus mirabilis HI4320 PMI3399 -64 4.9 GTTGCATAAAAATTCACT
Photorhabdus luminescens subsp. laumondii TTO1 plu4548 -84 3.9 ATTGGCTATAAAATCATT
-63 5.4 ATTGCATAAAAATTCATT
Position: -52
Score: 4.6
Sequence: ACAGAATAAAAATACACT
Position: -31
Score: 4.9
Sequence: TTCGAATAATAATTCACT
Locus tag: SeSPB_A3188
SeSPB_A3188 -52 4.6 ACAGAATAAAAATACACT
-31 4.9 TTCGAATAATAATTCACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: argA
Ortholog function: N-alpha-acetylglutamate synthase
Escherichia coli str. K-12 substr. MG1655 b2818 -49 4.6 ACAGAATAAAAATACACT
-28 4.5 TTCGAATAATCATGCAAA
Salmonella typhimurium LT2 STM2992 -52 4.6 ACAGAATAAAAATACACT
-31 4.9 TTCGAATAATAATTCACT
Citrobacter koseri ATCC BAA-895 CKO_04183 -140 4.6 ACAGAATAAAAATACATT
-119 4.6 TTCGAATAATCATGCAAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03226 -50 4.7 ACAGAATAAAAATACAAT
-29 4.4 TACGAATAATCATGCATT
Enterobacter sp. 638 Ent638_3261 -51 4.7 ATCGAATAAAAATACACA
-30 4.5 TACGAATAAACATTCACT
Erwinia amylovora ATCC 49946 EAM_2726 -50 4.7 AAAGAATAAAAATACACT
-29 4.9 ATCGAATAATAATGCATA
Yersinia pestis KIM y3162 -122 3.8 TCAGTTTATTAATACATA
-103 4.2 ACTTTATATATATGCAGT
-51 4.8 AAAGAATAAAAATACAAA
-30 4.8 ACCGAATAAAAATTCAAA
Serratia proteamaculans 568 Spro_3812 -51 4.8 AAAGAATAAAAATACAAA
-30 4.8 ATCGTATAAATATGCAAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0999 -50 4.5 AAAGAATAAAAATACAGA
-29 4.8 TACGAATAAAAATGCAAA
Edwardsiella tarda EIB202 ETAE_0713 100 3.9 GCAGAATAAAAATACAGA
121 4.4 AGCGAATAGATATTCACA
Proteus mirabilis HI4320 PMI2307 -52 4.7 AAAGAATAAAAATACATT
-31 4.3 TGCGAATAAAAATTCACC
47 4.3 TCCGTATATTAATGCACA
Photorhabdus luminescens subsp. laumondii TTO1 plu0644 -51 4.1 AAGGAATAAAAAAGCATA
-30 5 TACGAATAAAAATTCAAT
© 2009-2020 RegPrecise