Propagation of Fur regulog to Yersinia mollaretii ATCC 43969
| Source regulog: | Fur - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | FUR |
| Regulation mode: | repressor (activator) |
| Biological process: | Iron homeostasis |
| Effector: | Iron ion, (Fe2+) |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Yersinia mollaretii ATCC 43969 |
| Orthologous TF(s) | YmolA_01002223 |
| Regulated genes | 41 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -98
Score: 4.9 Sequence: GTTAATAAATCTCATTATC
Locus tag: YmolA_01000083
|
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| YmolA_01000083 | -98 | 4.9 | GTTAATAAATCTCATTATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yijD1 | ||||
| Ortholog function: putative iron permease FTR1 | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_02057 | -98 | 5.3 | TATAATGATAATAATTATC |
| -92 | 5 | GATAATAATTATCATTTGT | ||
| Yersinia pestis KIM | y2370 | -47 | 4.1 | GTTAATGTTAATAAATCTC |
| -41 | 4.5 | GTTAATAAATCTCATTATT | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1510 | -41 | 4.7 | GATAATAAGAATAAATATC |
| -35 | 4.2 | AAGAATAAATATCATTTGT | ||
|
Position: -86
Score: 5 Sequence: ACAAATAATTATCATTAAC
Locus tag: YmolA_01000100
|
||||
| YmolA_01000100 | -86 | 5 | ACAAATAATTATCATTAAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: viuB | ||||
| Ortholog function: FAD-binding 9 siderophore-interacting domain protein | ||||
| Serratia proteamaculans 568 | Spro_2919 | -65 | 4.5 | GCAAACAATTCTCATTATC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2023 | -72 | 4.4 | CGAAATGATAATAGTTATC |
| Proteus mirabilis HI4320 | PMI1437 | -66 | 4.6 | AATAGTGATAATGACTATC |
| -60 | 5 | GATAATGACTATCATTATT | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2040 | -97 | 5 | TTTAATGATAATAATTATC |
| -91 | 5.5 | GATAATAATTATCATTTTC | ||
|
Position: -127
Score: 5.5 Sequence: GACAATGATAATCATTATC
Position: -121
Score: 5.2 Sequence: GATAATCATTATCACTCTC
Locus tag: YmolA_01000754
|
||||
| YmolA_01000754 | -127 | 5.5 | GACAATGATAATCATTATC | |
| -121 | 5.2 | GATAATCATTATCACTCTC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yhhY | ||||
| Ortholog function: GCN5-related N-acetyltransferase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3441 | -119 | 4.9 | GACAATAATAATCATTCTC |
| -113 | 4.7 | AATAATCATTCTCATTCGC | ||
| Erwinia amylovora ATCC 49946 | EAM_3278 | -118 | 4.9 | GGCAATAATAATCATTATC |
| -112 | 4.9 | AATAATCATTATCATTCGC | ||
| Serratia proteamaculans 568 | Spro_4654 | -128 | 4.6 | CGCAATAATAATCATTATC |
| -122 | 4.7 | AATAATCATTATCATTCGT | ||
|
Position: -207
Score: 4.8 Sequence: GAAAACGATTATTACTATC
Position: -201
Score: 4.6 Sequence: GATTATTACTATCATTATT
Locus tag: YmolA_01000966
|
||||
| YmolA_01000966 | -207 | 4.8 | GAAAACGATTATTACTATC | |
| -201 | 4.6 | GATTATTACTATCATTATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: feoA | ||||
| Ortholog function: ferrous iron transport protein A | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3408 | -138 | 3.4 | GcTgATagaAAcCATTcTC |
| -132 | 4.5 | AGAAACCATTCTCATTATC | ||
| Salmonella typhimurium LT2 | STM3505 | -140 | 3.5 | GAagATagaAAcCATTcTC |
| -133 | 4.5 | AGAAACCATTCTCATTATC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_04830 | -139 | 4.1 | GATGATAAAAACCATTCTC |
| -133 | 4.7 | AAAAACCATTCTCATTATC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03778 | -133 | 4.1 | GATGATAAAAACCATTCTC |
| -127 | 4.7 | AAAAACCATTCTCATTATC | ||
| Enterobacter sp. 638 | Ent638_3821 | -62 | 4.5 | AGAAACCATTCTCATTATC |
| Yersinia pestis KIM | y3912 | -118 | 4.1 | GAGCATGAAAATAATTCTC |
| -112 | 4.4 | GAAAATAATTCTCAGTATT | ||
| Serratia proteamaculans 568 | Spro_4628 | -155 | 4.3 | GAATACGATAATGATTCTC |
| -149 | 4.9 | GATAATGATTCTCACTATT | ||
| Edwardsiella tarda EIB202 | ETAE_3283 | -163 | 4.3 | GAAAACGATTATCAGTTTT |
| -157 | 4.1 | GATTATCAGTTTTATTATA | ||
| Proteus mirabilis HI4320 | PMI2920 | -138 | 4 | AAAGATGGTTATAATTCTC |
| -132 | 4.3 | GGTTATAATTCTCATTTGC | ||
| -59 | 4.8 | GTTAATAATTATCAGTATC | ||
| -53 | 4.6 | AATTATCAGTATCATTATT | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0209 | -244 | 4 | AATGTTGGTTATTATTCTC |
| -238 | 4.2 | GGTTATTATTCTCATTTGC | ||
|
Position: -98
Score: 4.2 Sequence: GATAGTTATTGTGATTATC
Position: -92
Score: 4.5 Sequence: TATTGTGATTATCATTTGC
Locus tag: YmolA_01001179
|
||||
| YmolA_01001179 | -98 | 4.2 | GATAGTTATTGTGATTATC | |
| -92 | 4.5 | TATTGTGATTATCATTTGC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: PMI3708 | ||||
| Ortholog function: ECF-family sigma factor | ||||
| Proteus mirabilis HI4320 | PMI3708 | -115 | 4.2 | GATATTGCTTATTATTAAT |
| -75 | 4.2 | AATATTGATTATAAAAATT | ||
|
Position: -114
Score: 4.7 Sequence: GAGGATAATTCTCATTATC
Locus tag: YmolA_01001181
|
||||
| YmolA_01001181 | -114 | 4.7 | GAGGATAATTCTCATTATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yddB | ||||
| Ortholog function: TonB-dependent receptor | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1495 | -4 | 4.4 | GCTAATGATAACCATTCCC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0878 | -269 | 4.4 | TAAAACGATTATCATTTGT |
| -263 | 4.1 | GATTATCATTTGTATTATT | ||
| Proteus mirabilis HI4320 | PMI3706 | -115 | 4.2 | GATATTGCTTATTATTAAT |
| -75 | 4.2 | AATATTGATTATAAAAATT | ||
|
Position: -165
Score: 4.7 Sequence: GATAAAGAGAATGATTATC
Position: -159
Score: 4.7 Sequence: GAGAATGATTATCATTGTA
Position: -153
Score: 4.5 Sequence: GATTATCATTGTAATTATC
Locus tag: YmolA_01001225
|
||||
| YmolA_01001225 | -165 | 4.7 | GATAAAGAGAATGATTATC | |
| -159 | 4.7 | GAGAATGATTATCATTGTA | ||
| -153 | 4.5 | GATTATCATTGTAATTATC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: foxA | ||||
| Ortholog function: TonB-dependent siderophore receptor | ||||
| Salmonella typhimurium LT2 | STM0364 | -26 | 4.5 | GGTAATAATTCTTATTTAC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02304 | -98 | 4.2 | AATAATAATTCGCATTACT |
| Enterobacter sp. 638 | Ent638_0493 | -45 | 4.7 | GGTAATAATTCTTATTAAC |
| Erwinia amylovora ATCC 49946 | EAM_0358 | -123 | 4.4 | AAAAAAGATAATAATTCTC |
| -117 | 5 | GATAATAATTCTCATTTAC | ||
| Serratia proteamaculans 568 | Spro_2736 | -140 | 4.9 | GATAAAGATAATAATTATC |
| -134 | 5.2 | GATAATAATTATCATTAAT | ||
|
Position: 0
Score: 4.7 Sequence: ATGATTGATAATAATTATC
Position: 6
Score: 4.8 Sequence: GATAATAATTATCATATTG
Position: 18
Score: 4.7 Sequence: CATATTGATACTGATTATC
Position: 24
Score: 4.9 Sequence: GATACTGATTATCATTACC
Locus tag: YmolA_01001233
|
||||
| YmolA_01001233 | 0 | 4.7 | ATGATTGATAATAATTATC | |
| 6 | 4.8 | GATAATAATTATCATATTG | ||
| 18 | 4.7 | CATATTGATACTGATTATC | ||
| 24 | 4.9 | GATACTGATTATCATTACC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hemP | ||||
| Ortholog function: hemin uptake protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1705 | -47 | 4.1 | AATATTGATAATAAGAATC |
| -41 | 4.6 | GATAATAAGAATCATTGTT | ||
| Salmonella typhimurium LT2 | STM1346 | -47 | 4.5 | ATTATTGATAATAATAATC |
| -41 | 4.7 | GATAATAATAATCATTGTG | ||
| Citrobacter koseri ATCC BAA-895 | CKO_01729 | -50 | 4.7 | AATATTGATAATAATAATC |
| -44 | 4.9 | GATAATAATAATCATTGTT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03737 | 14 | 4.1 | CTTGATGATAATCATTCTT |
| 20 | 4.8 | GATAATCATTCTTGTTATC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02163 | -10 | 4.8 | ATTATTGATAATGATTATC |
| -4 | 5.1 | GATAATGATTATCATTGTT | ||
| Enterobacter sp. 638 | Ent638_1742 | -50 | 4.2 | TTTGTTGATAATGATTATC |
| -44 | 5.1 | GATAATGATTATCATTGTT | ||
| Serratia proteamaculans 568 | Spro_2170 | -68 | 4 | TCACATGATAATGATTCTC |
| -62 | 4.6 | GATAATGATTCTCACTTTG | ||
| Edwardsiella tarda EIB202 | ETAE_1796 | -10 | 4.1 | TTATACGATAATGATTATC |
| -4 | 5.1 | GATAATGATTATCATTAAG | ||
| Proteus mirabilis HI4320 | PMI1424 | -52 | 5.1 | GATAACGATAATGATTATC |
| -46 | 5.4 | GATAATGATTATCATAATC | ||
| -40 | 4.4 | GATTATCATAATCATAACC | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2631 | -54 | 4.7 | TATAACGATAATAATTCTC |
| -48 | 4.6 | GATAATAATTCTCACTATG | ||
|
Position: -54
Score: 4.9 Sequence: TTGAATGATTATGATTATC
Position: -48
Score: 4.9 Sequence: GATTATGATTATCATTTAA
Locus tag: YmolA_01001236
|
||||
| YmolA_01001236 | -54 | 4.9 | TTGAATGATTATGATTATC | |
| -48 | 4.9 | GATTATGATTATCATTTAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hemN1 | ||||
| Ortholog function: coproporphyrinogen III oxidase, iron utilization | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_02656 | -45 | 4.2 | GCGAATGATAATGATGATC |
| -39 | 4.7 | GATAATGATGATCATTTAC | ||
| Yersinia pestis KIM | y0547 | -54 | 4.1 | TCGAATGCTTATGATTATC |
| -48 | 4.4 | GCTTATGATTATCATTTAA | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3009 | -55 | 4.2 | CCAAATAAAAATAATTATC |
| -49 | 4.6 | AAAAATAATTATCATTTAA | ||
| Edwardsiella tarda EIB202 | ETAE_1793 | -59 | 4.4 | TCGAATGATAACTATTATC |
| -53 | 4.4 | GATAACTATTATCATTCAA | ||
|
Position: -71
Score: 4.9 Sequence: ACTAATGATAATTACTATC
Position: -65
Score: 4.2 Sequence: GATAATTACTATCAATCCC
Locus tag: YmolA_01001430
|
||||
| YmolA_01001430 | -71 | 4.9 | ACTAATGATAATTACTATC | |
| -65 | 4.2 | GATAATTACTATCAATCCC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: exbB | ||||
| Ortholog function: TonB-dependent siderophore transporter component ExbB | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3006 | -82 | 4.1 | AGTAATGAGAACGACTATC |
| Salmonella typhimurium LT2 | STM3159 | -82 | 4.1 | AGTAATGAGAACGACTATC |
| Citrobacter koseri ATCC BAA-895 | CKO_04401 | -97 | 4.1 | AGTAATGAGAACGACTATC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03426 | -97 | 4.3 | ACTAATGAGAACCACTATC |
| Enterobacter sp. 638 | Ent638_3417 | -97 | 4.3 | ACTAATGAGAACCACTATC |
| Yersinia pestis KIM | y3495 | -71 | 4.8 | ACTAATGATAATTACTATC |
| Serratia proteamaculans 568 | Spro_4211 | -94 | 4.4 | AATAATGAGAACTACTATC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0358 | -206 | 4.3 | AATAATGAGAACGACTATC |
| Proteus mirabilis HI4320 | PMI0029 | -170 | 4.8 | AGTAATGATAATTACTATC |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3941 | -98 | 5.1 | AATAATGATAATTACTATC |
|
Position: -82
Score: 4.6 Sequence: TGAAGTGATAATTATTATC
Position: -76
Score: 4.9 Sequence: GATAATTATTATCACTACC
Locus tag: YmolA_01001488
|
||||
| YmolA_01001488 | -82 | 4.6 | TGAAGTGATAATTATTATC | |
| -76 | 4.9 | GATAATTATTATCACTACC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sufA | ||||
| Ortholog function: scaffold protein for iron-sulfur cluster assembly | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1684 | -65 | 4.4 | TGAACTGATAATCATTATC |
| -59 | 5.1 | GATAATCATTATCACTAAC | ||
| Salmonella typhimurium LT2 | STM1369 | -66 | 4.7 | TGAAGTGATAATCATTATC |
| -60 | 5.1 | GATAATCATTATCACTAAC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_01717 | -66 | 4.7 | TGAAGTGATAATCATTATC |
| -60 | 5.1 | GATAATCATTATCACTAAC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02141 | -66 | 4.7 | TGAAGTGATAATCATTATC |
| -60 | 5.1 | GATAATCATTATCACTAAC | ||
| Enterobacter sp. 638 | Ent638_1760 | -67 | 4.4 | TGAAGTGATAATCGTTATC |
| -61 | 4.7 | GATAATCGTTATCACTAAC | ||
| Yersinia pestis KIM | y1934 | -129 | 4.5 | TGAAGTGATAATTATTATC |
| -123 | 4.8 | GATAATTATTATCACTACC | ||
| Serratia proteamaculans 568 | Spro_2179 | -77 | 4.4 | TGAAGTGATAATCGTTATC |
| -71 | 4.7 | GATAATCGTTATCACTAAC | ||
| Proteus mirabilis HI4320 | PMI1416 | -66 | 4.4 | GATAAGGGTTATCATTACC |
| -60 | 4 | GGTTATCATTACCATTAGA | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2622 | -87 | 4.4 | GATAAAGGTTATCATTACC |
| -81 | 4.3 | GGTTATCATTACCATTATA | ||
|
Position: -48
Score: 4.1 Sequence: TCAAATGATATTGATAATC
Position: -42
Score: 5.6 Sequence: GATATTGATAATCATTTTC
Position: -36
Score: 4.8 Sequence: GATAATCATTTTCATTTAA
Locus tag: YmolA_01001682
|
||||
| YmolA_01001682 | -48 | 4.1 | TCAAATGATATTGATAATC | |
| -42 | 5.6 | GATATTGATAATCATTTTC | ||
| -36 | 4.8 | GATAATCATTTTCATTTAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sitA | ||||
| Ortholog function: iron ABC transporter, periplasmic substrate-binding protein | ||||
| Salmonella typhimurium LT2 | STM2861 | -99 | 4.5 | GCAAATAAGAATTATTTTC |
| -93 | 4.2 | AAGAATTATTTTCATTTAT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_04090 | -84 | 4.5 | GTAAATAAGAATTATTTTC |
| -78 | 4.2 | AAGAATTATTTTCATTTAT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_00940 | -111 | 4.1 | GATAAAGATAATTTTTCTC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03078 | -99 | 4.5 | GCAAATAAGAATTATTTTC |
| -93 | 4.2 | AAGAATTATTTTCATTTAT | ||
| Enterobacter sp. 638 | Ent638_1111 | -98 | 4.9 | TTTAATGATAATTATTTTC |
| -92 | 4.5 | GATAATTATTTTCATTTAA | ||
| Yersinia pestis KIM | y1897 | -39 | 5.2 | GGTATTGATAATCATTTTC |
| -33 | 4.7 | GATAATCATTTTCATTTGT | ||
| Serratia proteamaculans 568 | Spro_2133 | -41 | 5.4 | GATATTGATAATCATTTTC |
| -35 | 4.6 | GATAATCATTTTCATTTGA | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2392 | -53 | 5.1 | GATATTGATAATTATTCTC |
| Proteus mirabilis HI4320 | PMI1027 | -63 | 4.2 | TGAAATGATATTGATAATC |
| -57 | 5.5 | GATATTGATAATCATTATC | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2672 | -49 | 5.2 | GATATTGATAATCGTTATC |
| -43 | 4.5 | GATAATCGTTATCATATAC | ||
|
Position: -144
Score: 4.8 Sequence: ACTAATGATAATGGTTATC
Position: -138
Score: 5 Sequence: GATAATGGTTATCAATAGC
Locus tag: YmolA_01002036
|
||||
| YmolA_01002036 | -144 | 4.8 | ACTAATGATAATGGTTATC | |
| -138 | 5 | GATAATGGTTATCAATAGC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sapA | ||||
| Ortholog function: ABC peptide transport periplasmic protein | ||||
| Erwinia amylovora ATCC 49946 | EAM_1842 | -198 | 5.1 | GTTAATAATAATCATTCTC |
| -192 | 5.2 | AATAATCATTCTCATTATC | ||
| Edwardsiella tarda EIB202 | ETAE_1870 | -222 | 4.1 | TTGAATGATAATGTTTATC |
| -216 | 4.8 | GATAATGTTTATCAATATC | ||
| Proteus mirabilis HI4320 | PMI1378 | -131 | 4.7 | GATAATCTTTATCATTAGC |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2587 | -141 | 4 | ACAGATGATAATGGTTATC |
| -135 | 4.3 | GATAATGGTTATCAATACG | ||
|
Position: -229
Score: 4.4 Sequence: TTAAATAAGAATCATTCTT
Position: -223
Score: 3.8 Sequence: AAGAATCATTCTTTTTAGT
Position: -196
Score: 3.8 Sequence: TGTAATGTGAATGATTCTT
Position: -190
Score: 4.1 Sequence: GTGAATGATTCTTATAATA
Position: -187
Score: 3.5 Sequence: AATGATTCTTATAATAATT
Position: -184
Score: 4 Sequence: GATTCTTATAATAATTTAC
Position: -123
Score: 3.6 Sequence: TAAATTATTTATTGTTTTT
Locus tag: YmolA_01002152
|
||||
| YmolA_01002152 | -229 | 4.4 | TTAAATAAGAATCATTCTT | |
| -223 | 3.8 | AAGAATCATTCTTTTTAGT | ||
| -196 | 3.8 | TGTAATGTGAATGATTCTT | ||
| -190 | 4.1 | GTGAATGATTCTTATAATA | ||
| -187 | 3.5 | AATGATTCTTATAATAATT | ||
| -184 | 4 | GATTCTTATAATAATTTAC | ||
| -123 | 3.6 | TAAATTATTTATTGTTTTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ftnA | ||||
| Ortholog function: ferritin | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1905 | -127 | 3.4 | GgTAATGcgttTtATTccC |
| -121 | 3 | GcgttTtATtccCATTcgt | ||
| Salmonella typhimurium LT2 | STM1935 | -100 | 4 | AATAATTAAATTTAATATT |
| Citrobacter koseri ATCC BAA-895 | CKO_01042 | -97 | 4.3 | AATAATTAAATTTATTATT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02402 | -161 | 4 | ATAAATTAAAAGCATTCTC |
| -155 | 3.8 | TAAAAGCATTCTCATTTAT | ||
| Enterobacter sp. 638 | Ent638_2486 | -103 | 3.7 | TATTTTAATAAATAATATC |
| -97 | 3.6 | AATAAATAATATCTTTATT | ||
| Erwinia amylovora ATCC 49946 | EAM_2940 | -131 | 4.4 | TGGAATGATTATCAATTAC |
| Yersinia pestis KIM | y2524 | -93 | 4.4 | AATAATGTGAATGATTATC |
| -87 | 4.1 | GTGAATGATTATCATGATG | ||
| Serratia proteamaculans 568 | Spro_1942 | -174 | 4.5 | GAAAATAGTTATCATAATT |
| -168 | 4 | AGTTATCATAATTATTTAA | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2473 | -158 | 4.6 | TTAAATGATAATGAATATC |
| -152 | 4.8 | GATAATGAATATCAATAGC | ||
| Proteus mirabilis HI4320 | PMI1007 | -184 | 4.7 | GTTAATGATAATCAATTCC |
| -178 | 4.1 | GATAATCAATTCCATTAAT | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2689 | -147 | 4.4 | TTAAATGAGATTCATTTTC |
| -141 | 4.4 | GAGATTCATTTTCATTTTT | ||
|
Position: -64
Score: 4 Sequence: AGTAATGCAAATCATTTGT
Locus tag: YmolA_01002463
|
||||
| YmolA_01002463 | -64 | 4 | AGTAATGCAAATCATTTGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fatB | ||||
| Ortholog function: iron ABC transporter, substrate-binding protein | ||||
| Yersinia pestis KIM | y4043 | -26 | 4.8 | GGTAATAAAAATCATTAGC |
| -20 | 4.2 | AAAAATCATTAGCATTACT | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2564 | -86 | 4.2 | GCGAATGATAATTAAATTC |
| -80 | 4.1 | GATAATTAAATTCTTTATT | ||
| Proteus mirabilis HI4320 | PMI2957 | -121 | 4.1 | GTGAATTAGTATCATTACT |
|
Position: -138
Score: 4.3 Sequence: GCGCTTGATAATTATTATC
Position: -132
Score: 4.9 Sequence: GATAATTATTATCATTTGG
Locus tag: YmolA_01002495
|
||||
| YmolA_01002495 | -138 | 4.3 | GCGCTTGATAATTATTATC | |
| -132 | 4.9 | GATAATTATTATCATTTGG | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: mntH | ||||
| Ortholog function: Mn2+/Fe2+ transporter, NRAMP family | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2392 | -68 | 4.7 | GAATTTGATAATCATTCTC |
| -62 | 4.2 | GATAATCATTCTCGTTTGG | ||
| Salmonella typhimurium LT2 | STM2408 | -68 | 4.5 | GCACTTGATAATCATTATC |
| -62 | 4.8 | GATAATCATTATCAATAAA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_00404 | -50 | 4.3 | GCACTTGATAATCATTCTC |
| -44 | 4.5 | GATAATCATTCTCAATAAA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02743 | -68 | 4.3 | GAACTTGATAATCATTCGC |
| -62 | 4.3 | GATAATCATTCGCATTTTG | ||
| Enterobacter sp. 638 | Ent638_2926 | -67 | 4.8 | GATCTTGATAATCATTCTC |
| -61 | 4.8 | GATAATCATTCTCATTTTG | ||
| Yersinia pestis KIM | y1500 | -78 | 4 | GCGCTTGATAATTATTCTC |
| -72 | 4.6 | GATAATTATTCTCATTTAA | ||
| Serratia proteamaculans 568 | Spro_3415 | -66 | 4.3 | GCACTTGATAATTATTATC |
| -60 | 5.2 | GATAATTATTATCATTTAC | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0843 | -63 | 4.5 | GCACTTGATAATCATTATC |
| -57 | 5.2 | GATAATCATTATCATTTTT | ||
| Edwardsiella tarda EIB202 | ETAE_1142 | -134 | 4.5 | GCAGTTGATAATCATTATC |
|
Position: -173
Score: 4.7 Sequence: GCGAATGATTTTCACTATC
Locus tag: YmolA_01002522
|
||||
| YmolA_01002522 | -173 | 4.7 | GCGAATGATTTTCACTATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sfuA | ||||
| Ortholog function: iron(III) ABC transporter, periplasmic protein | ||||
| Yersinia pestis KIM | y1526 | -108 | 4.8 | AACAATGATAATCATTTTT |
| -102 | 4.7 | GATAATCATTTTTATTACC | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3137 | -169 | 4.2 | CGAAATAATAATAACTATC |
| -163 | 4.7 | AATAATAACTATCATTATT | ||
| -157 | 4.4 | AACTATCATTATTATTATC | ||
|
Position: -195
Score: 4.1 Sequence: GATAGTCATTATCAATTAG
Locus tag: YmolA_01002592
|
||||
| YmolA_01002592 | -195 | 4.1 | GATAGTCATTATCAATTAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: dps | ||||
| Ortholog function: DNA protection ferritin-like protein | ||||
| Salmonella typhimurium LT2 | STM0831 | -188 | 4.4 | TAAAATGAGAATTATTACC |
| -136 | 4 | TTTAATCAAAATAAATATT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_02310 | -188 | 4.5 | GTGAATGAGAATTATTAAC |
| -137 | 4.3 | TTTAATCATTTTCAATATT | ||
| Enterobacter sp. 638 | Ent638_1299 | -118 | 4.1 | TAACATTATTATCACTATT |
|
Position: -124
Score: 4.9 Sequence: CAGAATGATAATCACTATC
Locus tag: YmolA_01002631
|
||||
| YmolA_01002631 | -124 | 4.9 | CAGAATGATAATCACTATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yijD | ||||
| Ortholog function: iron permease FTR1 | ||||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01045 | -76 | 5 | TGTAATGATAATCACTATC |
| -70 | 4.2 | GATAATCACTATCATAAAT | ||
| Enterobacter sp. 638 | Ent638_1545 | -76 | 4.9 | CGTAATGATAATCACTATC |
| Erwinia amylovora ATCC 49946 | EAM_2059 | -80 | 4.6 | GATAATGATAATCCCTATC |
| Yersinia pestis KIM | y2452 | -84 | 4.4 | CAGAATGATAATCACAATC |
| -78 | 4.3 | GATAATCACAATCGTTTTA | ||
| Serratia proteamaculans 568 | Spro_2929 | -109 | 4.8 | CAGAATGATAATCACTATC |
|
Position: -338
Score: 5.6 Sequence: GATTATGATAATCATTATC
Locus tag: YmolA_01002686
|
||||
| YmolA_01002686 | -338 | 5.6 | GATTATGATAATCATTATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hasR | ||||
| Ortholog function: TonB-dependent heme receptor | ||||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1538 | -102 | 5 | GGTAATGATTTTTATTATC |
| -96 | 4.8 | GATTTTTATTATCATTTTC | ||
| -90 | 4.1 | TATTATCATTTTCATTAAG | ||
|
Position: -63
Score: 4.5 Sequence: GATAATGATAAATATAATT
Position: -45
Score: 4.3 Sequence: TGATATAAGAATCATTCTC
Locus tag: YmolA_01002716
|
||||
| YmolA_01002716 | -63 | 4.5 | GATAATGATAAATATAATT | |
| -45 | 4.3 | TGATATAAGAATCATTCTC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: iucA2 | ||||
| Ortholog function: aerobactin synthetase (subunit alpha) | ||||
| Yersinia pestis KIM | y3380 | -63 | 4.8 | GATAATGATAACCACTATT |
| Yersinia pestis KIM | y3381 | -63 | 4.8 | GATAATGATAACCACTATT |
| Serratia proteamaculans 568 | Spro_0922 | -63 | 4.2 | GATAACAATAAATATTATT |
| -45 | 4.1 | TGATATAAGAATCATTCTC | ||
|
Position: -93
Score: 4.8 Sequence: AATTATATTTATCATTATC
Position: -87
Score: 4.3 Sequence: ATTTATCATTATCAATAAT
Locus tag: YmolA_01002717
|
||||
| YmolA_01002717 | -93 | 4.8 | AATTATATTTATCATTATC | |
| -87 | 4.3 | ATTTATCATTATCAATAAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: Spro_0923 | ||||
| Ortholog function: major facilitator superfamily MFS_1 | ||||
| Serratia proteamaculans 568 | Spro_0923 | -93 | 4.3 | AATAATATTTATTGTTATC |
|
Position: -338
Score: 4.5 Sequence: ACAAATGATAATTACTCTC
Locus tag: YmolA_01002981
|
||||
| YmolA_01002981 | -338 | 4.5 | ACAAATGATAATTACTCTC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: adhE | ||||
| Ortholog function: iron-containing aldehyde-alcohol dehydrogenase | ||||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02199 | -332 | 4 | TTTAATGCTAATCGTTTTT |
| -326 | 3.2 | GCTAATCGTTTTTTTAATT | ||
| Yersinia pestis KIM | y2023 | -339 | 5 | GATAATGACAATCATTCTC |
| -333 | 3.7 | GAcAATcATtcTCAaaAaa | ||
| Serratia proteamaculans 568 | Spro_2704 | -330 | 3.9 | GTTATCAAGAATGATTCTC |
| -324 | 4.2 | AAGAATGATTCTCAAAAAC | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2326 | -368 | 4.5 | CCTAATGATATTGATTATC |
| -362 | 5.2 | GATATTGATTATCAATATC | ||
| Edwardsiella tarda EIB202 | ETAE_1508 | -317 | 4 | aAagATGAgAtTCATTcTC |
| -311 | 4.3 | GAgAtTcATtcTCATTAaa | ||
| Proteus mirabilis HI4320 | PMI1486 | -300 | 4.5 | GTAATTAATTATCATTACC |
| -294 | 4 | AATTATCATTACCATTTAA | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2496 | -191 | 3.9 | ccaAtcaATAATaATTATC |
| -185 | 4.4 | AATAATAATTATCACTGAC | ||
|
Position: -90
Score: 4.9 Sequence: GGCATTGATAATCATTTTC
Position: -84
Score: 5.2 Sequence: GATAATCATTTTCAATATC
Locus tag: YmolA_01003016
|
||||
| YmolA_01003016 | -90 | 4.9 | GGCATTGATAATCATTTTC | |
| -84 | 5.2 | GATAATCATTTTCAATATC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sodA | ||||
| Ortholog function: manganese/iron superoxide dismutase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3908 | -99 | 4.7 | GGCATTGATAATCATTTTC |
| -93 | 5 | GATAATCATTTTCAATATC | ||
| Salmonella typhimurium LT2 | STM4055 | -99 | 4.7 | GGCATTGATAATCATTTTC |
| -93 | 5 | GATAATCATTTTCAATATC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03093 | -88 | 4.3 | GGCATTGATAAGCATTTTC |
| -82 | 4.4 | GATAAGCATTTTCAATATC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04217 | -88 | 4.3 | GGCATTGATAAGCATTTTC |
| -82 | 4 | GATAAGCATTTTCAATACC | ||
| Enterobacter sp. 638 | Ent638_4063 | -100 | 4.7 | GGCATTGATAATCATTTTC |
| -94 | 5 | GATAATCATTTTCAATATC | ||
| Yersinia pestis KIM | y4080 | -104 | 4.4 | AGGTTTGATAATCATTTTC |
| -98 | 5 | GATAATCATTTTCAATATC | ||
| Serratia proteamaculans 568 | Spro_0081 | -105 | 4.7 | GGCATTGATAATCATTTTC |
| -99 | 5 | GATAATCATTTTCAATATC | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0092 | -105 | 4.9 | AATAATCATTTTCAATATC |
| Proteus mirabilis HI4320 | PMI3036 | -95 | 4.6 | GGATATGATAATGATTTTC |
| -89 | 5.2 | GATAATGATTTTCATTAAC | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0075 | -102 | 4.3 | GGTATTGATAAGCATTTCC |
|
Position: -37
Score: 5.2 Sequence: GATATTAGTTATCATTATC
Locus tag: YmolA_01003074
|
||||
| YmolA_01003074 | -37 | 5.2 | GATATTAGTTATCATTATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yjjZ | ||||
| Ortholog function: putative membrane protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4567 | -60 | 4.4 | GCAAATGATAAAAATTATC |
| -37 | 5.2 | GATATTGGTTATCATTATC | ||
| Salmonella typhimurium LT2 | STM4552 | -37 | 5.2 | GATATTGGTTATCATTATC |
| -31 | 4.2 | GGTTATCATTATCAATTCC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03427 | 2 | 4.9 | GCTATTGGTTATCATTATC |
| 8 | 4.1 | GGTTATCATTATCGGTATC | ||
| Enterobacter sp. 638 | Ent638_0529 | -37 | 5.2 | GATATTGGTTATCATTATC |
| -31 | 4 | GGTTATCATTATCATATTG | ||
| Erwinia amylovora ATCC 49946 | EAM_0565 | -70 | 4.3 | CAAAGTGATAATGATTAAC |
| -64 | 4.3 | GATAATGATTAACATATGC | ||
| -47 | 4.9 | GCTATTGGTAATCATTATC | ||
| -41 | 4.8 | GGTAATCATTATCATTTAT | ||
| Yersinia pestis KIM | y3754 | -4 | 4.9 | GATATTGGTTATGATTATC |
| 2 | 5.2 | GGTTATGATTATCATTATC | ||
| Serratia proteamaculans 568 | Spro_0646 | -39 | 4.7 | GATATTAGTTCTCATTATC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0738 | -89 | 5 | GATATTAGTTATCATTATC |
| -83 | 4.5 | AGTTATCATTATCATTTTT | ||
| Proteus mirabilis HI4320 | PMI2497 | -27 | 5.3 | AATAATGAAAATCATTATC |
| -21 | 5.2 | GAAAATCATTATCATTAAC | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4253 | -92 | 5.2 | GATATTGGTAATCATTATC |
| -86 | 4.7 | GGTAATCATTATCATTTGT | ||
|
Position: -45
Score: 4.6 Sequence: AATGATGATAATAGTTATC
Locus tag: YmolA_01003137
|
||||
| YmolA_01003137 | -45 | 4.6 | AATGATGATAATAGTTATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gpmA | ||||
| Ortholog function: phosphoglyceromutase 1 | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0755 | -47 | 5 | TATAATGAGAATTATTATC |
| -41 | 4.7 | GAGAATTATTATCATTAAA | ||
| Salmonella typhimurium LT2 | STM0772 | -47 | 5 | TATAATGAGAATTATTATC |
| -41 | 4.5 | GAGAATTATTATCATTACA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_02381 | -46 | 5 | TATAATGAGAATTATTATC |
| -40 | 4.5 | GAGAATTATTATCATTCAA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00768 | -96 | 4.6 | TATAATGAGAATAGTTATC |
| Enterobacter sp. 638 | Ent638_1246 | -164 | 4.7 | TATAATGAGAATTGTTATC |
| -158 | 4.1 | GAGAATTGTTATCATTCAA | ||
| Yersinia pestis KIM | y3048 | -103 | 5.3 | TATAATGATAATAATTATC |
| -97 | 4.6 | GATAATAATTATCATTGAA | ||
| Serratia proteamaculans 568 | Spro_1288 | -51 | 4.9 | TATAATGATTTTCGTTATC |
| Edwardsiella tarda EIB202 | ETAE_2569 | -49 | 4.6 | CATGATGATAATAATTATC |
| -43 | 5.3 | GATAATAATTATCATTATA | ||
|
Position: -95
Score: 5.1 Sequence: GAAAATGATAATTAATTTC
Position: -89
Score: 5 Sequence: GATAATTAATTTCATTATC
Locus tag: YmolA_01003491
|
||||
| YmolA_01003491 | -95 | 5.1 | GAAAATGATAATTAATTTC | |
| -89 | 5 | GATAATTAATTTCATTATC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yddB | ||||
| Ortholog function: TonB-dependent receptor | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1495 | -4 | 4.4 | GCTAATGATAACCATTCCC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0878 | -269 | 4.4 | TAAAACGATTATCATTTGT |
| -263 | 4.1 | GATTATCATTTGTATTATT | ||
| Proteus mirabilis HI4320 | PMI3706 | -115 | 4.2 | GATATTGCTTATTATTAAT |
| -75 | 4.2 | AATATTGATTATAAAAATT | ||