Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Fur regulog to Yersinia mollaretii ATCC 43969

Reference regulog properties
Source regulog: Fur - Enterobacteriales
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor (activator)
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Yersinia mollaretii ATCC 43969
Orthologous TF(s) YmolA_01002223
Regulated genes 41
Built upon 656 sites [see more]
Predicted regulatory interactions in Yersinia mollaretii ATCC 43969
Locus tag Position Score Sequence
Position: -98
Score: 4.9
Sequence: GTTAATAAATCTCATTATC
Locus tag: YmolA_01000083
YmolA_01000083 -98 4.9 GTTAATAAATCTCATTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yijD1
Ortholog function: putative iron permease FTR1
Citrobacter koseri ATCC BAA-895 CKO_02057 -98 5.3 TATAATGATAATAATTATC
-92 5 GATAATAATTATCATTTGT
Yersinia pestis KIM y2370 -47 4.1 GTTAATGTTAATAAATCTC
-41 4.5 GTTAATAAATCTCATTATT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1510 -41 4.7 GATAATAAGAATAAATATC
-35 4.2 AAGAATAAATATCATTTGT
Position: -86
Score: 5
Sequence: ACAAATAATTATCATTAAC
Locus tag: YmolA_01000100
YmolA_01000100 -86 5 ACAAATAATTATCATTAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: viuB
Ortholog function: FAD-binding 9 siderophore-interacting domain protein
Serratia proteamaculans 568 Spro_2919 -65 4.5 GCAAACAATTCTCATTATC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2023 -72 4.4 CGAAATGATAATAGTTATC
Proteus mirabilis HI4320 PMI1437 -66 4.6 AATAGTGATAATGACTATC
-60 5 GATAATGACTATCATTATT
Photorhabdus luminescens subsp. laumondii TTO1 plu2040 -97 5 TTTAATGATAATAATTATC
-91 5.5 GATAATAATTATCATTTTC
Position: -127
Score: 5.5
Sequence: GACAATGATAATCATTATC
Position: -121
Score: 5.2
Sequence: GATAATCATTATCACTCTC
Locus tag: YmolA_01000754
YmolA_01000754 -127 5.5 GACAATGATAATCATTATC
-121 5.2 GATAATCATTATCACTCTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yhhY
Ortholog function: GCN5-related N-acetyltransferase
Escherichia coli str. K-12 substr. MG1655 b3441 -119 4.9 GACAATAATAATCATTCTC
-113 4.7 AATAATCATTCTCATTCGC
Erwinia amylovora ATCC 49946 EAM_3278 -118 4.9 GGCAATAATAATCATTATC
-112 4.9 AATAATCATTATCATTCGC
Serratia proteamaculans 568 Spro_4654 -128 4.6 CGCAATAATAATCATTATC
-122 4.7 AATAATCATTATCATTCGT
Position: -207
Score: 4.8
Sequence: GAAAACGATTATTACTATC
Position: -201
Score: 4.6
Sequence: GATTATTACTATCATTATT
Locus tag: YmolA_01000966
YmolA_01000966 -207 4.8 GAAAACGATTATTACTATC
-201 4.6 GATTATTACTATCATTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: feoA
Ortholog function: ferrous iron transport protein A
Escherichia coli str. K-12 substr. MG1655 b3408 -138 3.4 GcTgATagaAAcCATTcTC
-132 4.5 AGAAACCATTCTCATTATC
Salmonella typhimurium LT2 STM3505 -140 3.5 GAagATagaAAcCATTcTC
-133 4.5 AGAAACCATTCTCATTATC
Citrobacter koseri ATCC BAA-895 CKO_04830 -139 4.1 GATGATAAAAACCATTCTC
-133 4.7 AAAAACCATTCTCATTATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03778 -133 4.1 GATGATAAAAACCATTCTC
-127 4.7 AAAAACCATTCTCATTATC
Enterobacter sp. 638 Ent638_3821 -62 4.5 AGAAACCATTCTCATTATC
Yersinia pestis KIM y3912 -118 4.1 GAGCATGAAAATAATTCTC
-112 4.4 GAAAATAATTCTCAGTATT
Serratia proteamaculans 568 Spro_4628 -155 4.3 GAATACGATAATGATTCTC
-149 4.9 GATAATGATTCTCACTATT
Edwardsiella tarda EIB202 ETAE_3283 -163 4.3 GAAAACGATTATCAGTTTT
-157 4.1 GATTATCAGTTTTATTATA
Proteus mirabilis HI4320 PMI2920 -138 4 AAAGATGGTTATAATTCTC
-132 4.3 GGTTATAATTCTCATTTGC
-59 4.8 GTTAATAATTATCAGTATC
-53 4.6 AATTATCAGTATCATTATT
Photorhabdus luminescens subsp. laumondii TTO1 plu0209 -244 4 AATGTTGGTTATTATTCTC
-238 4.2 GGTTATTATTCTCATTTGC
Position: -98
Score: 4.2
Sequence: GATAGTTATTGTGATTATC
Position: -92
Score: 4.5
Sequence: TATTGTGATTATCATTTGC
Locus tag: YmolA_01001179
YmolA_01001179 -98 4.2 GATAGTTATTGTGATTATC
-92 4.5 TATTGTGATTATCATTTGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: PMI3708
Ortholog function: ECF-family sigma factor
Proteus mirabilis HI4320 PMI3708 -115 4.2 GATATTGCTTATTATTAAT
-75 4.2 AATATTGATTATAAAAATT
Position: -114
Score: 4.7
Sequence: GAGGATAATTCTCATTATC
Locus tag: YmolA_01001181
YmolA_01001181 -114 4.7 GAGGATAATTCTCATTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yddB
Ortholog function: TonB-dependent receptor
Escherichia coli str. K-12 substr. MG1655 b1495 -4 4.4 GCTAATGATAACCATTCCC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0878 -269 4.4 TAAAACGATTATCATTTGT
-263 4.1 GATTATCATTTGTATTATT
Proteus mirabilis HI4320 PMI3706 -115 4.2 GATATTGCTTATTATTAAT
-75 4.2 AATATTGATTATAAAAATT
Position: -165
Score: 4.7
Sequence: GATAAAGAGAATGATTATC
Position: -159
Score: 4.7
Sequence: GAGAATGATTATCATTGTA
Position: -153
Score: 4.5
Sequence: GATTATCATTGTAATTATC
Locus tag: YmolA_01001225
YmolA_01001225 -165 4.7 GATAAAGAGAATGATTATC
-159 4.7 GAGAATGATTATCATTGTA
-153 4.5 GATTATCATTGTAATTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: foxA
Ortholog function: TonB-dependent siderophore receptor
Salmonella typhimurium LT2 STM0364 -26 4.5 GGTAATAATTCTTATTTAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02304 -98 4.2 AATAATAATTCGCATTACT
Enterobacter sp. 638 Ent638_0493 -45 4.7 GGTAATAATTCTTATTAAC
Erwinia amylovora ATCC 49946 EAM_0358 -123 4.4 AAAAAAGATAATAATTCTC
-117 5 GATAATAATTCTCATTTAC
Serratia proteamaculans 568 Spro_2736 -140 4.9 GATAAAGATAATAATTATC
-134 5.2 GATAATAATTATCATTAAT
Position: 0
Score: 4.7
Sequence: ATGATTGATAATAATTATC
Position: 6
Score: 4.8
Sequence: GATAATAATTATCATATTG
Position: 18
Score: 4.7
Sequence: CATATTGATACTGATTATC
Position: 24
Score: 4.9
Sequence: GATACTGATTATCATTACC
Locus tag: YmolA_01001233
YmolA_01001233 0 4.7 ATGATTGATAATAATTATC
6 4.8 GATAATAATTATCATATTG
18 4.7 CATATTGATACTGATTATC
24 4.9 GATACTGATTATCATTACC
Supported by regulated orthologs from reference regulons
Ortholog gene name: hemP
Ortholog function: hemin uptake protein
Escherichia coli str. K-12 substr. MG1655 b1705 -47 4.1 AATATTGATAATAAGAATC
-41 4.6 GATAATAAGAATCATTGTT
Salmonella typhimurium LT2 STM1346 -47 4.5 ATTATTGATAATAATAATC
-41 4.7 GATAATAATAATCATTGTG
Citrobacter koseri ATCC BAA-895 CKO_01729 -50 4.7 AATATTGATAATAATAATC
-44 4.9 GATAATAATAATCATTGTT
Citrobacter koseri ATCC BAA-895 CKO_03737 14 4.1 CTTGATGATAATCATTCTT
20 4.8 GATAATCATTCTTGTTATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02163 -10 4.8 ATTATTGATAATGATTATC
-4 5.1 GATAATGATTATCATTGTT
Enterobacter sp. 638 Ent638_1742 -50 4.2 TTTGTTGATAATGATTATC
-44 5.1 GATAATGATTATCATTGTT
Serratia proteamaculans 568 Spro_2170 -68 4 TCACATGATAATGATTCTC
-62 4.6 GATAATGATTCTCACTTTG
Edwardsiella tarda EIB202 ETAE_1796 -10 4.1 TTATACGATAATGATTATC
-4 5.1 GATAATGATTATCATTAAG
Proteus mirabilis HI4320 PMI1424 -52 5.1 GATAACGATAATGATTATC
-46 5.4 GATAATGATTATCATAATC
-40 4.4 GATTATCATAATCATAACC
Photorhabdus luminescens subsp. laumondii TTO1 plu2631 -54 4.7 TATAACGATAATAATTCTC
-48 4.6 GATAATAATTCTCACTATG
Position: -54
Score: 4.9
Sequence: TTGAATGATTATGATTATC
Position: -48
Score: 4.9
Sequence: GATTATGATTATCATTTAA
Locus tag: YmolA_01001236
YmolA_01001236 -54 4.9 TTGAATGATTATGATTATC
-48 4.9 GATTATGATTATCATTTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hemN1
Ortholog function: coproporphyrinogen III oxidase, iron utilization
Citrobacter koseri ATCC BAA-895 CKO_02656 -45 4.2 GCGAATGATAATGATGATC
-39 4.7 GATAATGATGATCATTTAC
Yersinia pestis KIM y0547 -54 4.1 TCGAATGCTTATGATTATC
-48 4.4 GCTTATGATTATCATTTAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3009 -55 4.2 CCAAATAAAAATAATTATC
-49 4.6 AAAAATAATTATCATTTAA
Edwardsiella tarda EIB202 ETAE_1793 -59 4.4 TCGAATGATAACTATTATC
-53 4.4 GATAACTATTATCATTCAA
Position: -71
Score: 4.9
Sequence: ACTAATGATAATTACTATC
Position: -65
Score: 4.2
Sequence: GATAATTACTATCAATCCC
Locus tag: YmolA_01001430
YmolA_01001430 -71 4.9 ACTAATGATAATTACTATC
-65 4.2 GATAATTACTATCAATCCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: exbB
Ortholog function: TonB-dependent siderophore transporter component ExbB
Escherichia coli str. K-12 substr. MG1655 b3006 -82 4.1 AGTAATGAGAACGACTATC
Salmonella typhimurium LT2 STM3159 -82 4.1 AGTAATGAGAACGACTATC
Citrobacter koseri ATCC BAA-895 CKO_04401 -97 4.1 AGTAATGAGAACGACTATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03426 -97 4.3 ACTAATGAGAACCACTATC
Enterobacter sp. 638 Ent638_3417 -97 4.3 ACTAATGAGAACCACTATC
Yersinia pestis KIM y3495 -71 4.8 ACTAATGATAATTACTATC
Serratia proteamaculans 568 Spro_4211 -94 4.4 AATAATGAGAACTACTATC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0358 -206 4.3 AATAATGAGAACGACTATC
Proteus mirabilis HI4320 PMI0029 -170 4.8 AGTAATGATAATTACTATC
Photorhabdus luminescens subsp. laumondii TTO1 plu3941 -98 5.1 AATAATGATAATTACTATC
Position: -82
Score: 4.6
Sequence: TGAAGTGATAATTATTATC
Position: -76
Score: 4.9
Sequence: GATAATTATTATCACTACC
Locus tag: YmolA_01001488
YmolA_01001488 -82 4.6 TGAAGTGATAATTATTATC
-76 4.9 GATAATTATTATCACTACC
Supported by regulated orthologs from reference regulons
Ortholog gene name: sufA
Ortholog function: scaffold protein for iron-sulfur cluster assembly
Escherichia coli str. K-12 substr. MG1655 b1684 -65 4.4 TGAACTGATAATCATTATC
-59 5.1 GATAATCATTATCACTAAC
Salmonella typhimurium LT2 STM1369 -66 4.7 TGAAGTGATAATCATTATC
-60 5.1 GATAATCATTATCACTAAC
Citrobacter koseri ATCC BAA-895 CKO_01717 -66 4.7 TGAAGTGATAATCATTATC
-60 5.1 GATAATCATTATCACTAAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02141 -66 4.7 TGAAGTGATAATCATTATC
-60 5.1 GATAATCATTATCACTAAC
Enterobacter sp. 638 Ent638_1760 -67 4.4 TGAAGTGATAATCGTTATC
-61 4.7 GATAATCGTTATCACTAAC
Yersinia pestis KIM y1934 -129 4.5 TGAAGTGATAATTATTATC
-123 4.8 GATAATTATTATCACTACC
Serratia proteamaculans 568 Spro_2179 -77 4.4 TGAAGTGATAATCGTTATC
-71 4.7 GATAATCGTTATCACTAAC
Proteus mirabilis HI4320 PMI1416 -66 4.4 GATAAGGGTTATCATTACC
-60 4 GGTTATCATTACCATTAGA
Photorhabdus luminescens subsp. laumondii TTO1 plu2622 -87 4.4 GATAAAGGTTATCATTACC
-81 4.3 GGTTATCATTACCATTATA
Position: -48
Score: 4.1
Sequence: TCAAATGATATTGATAATC
Position: -42
Score: 5.6
Sequence: GATATTGATAATCATTTTC
Position: -36
Score: 4.8
Sequence: GATAATCATTTTCATTTAA
Locus tag: YmolA_01001682
YmolA_01001682 -48 4.1 TCAAATGATATTGATAATC
-42 5.6 GATATTGATAATCATTTTC
-36 4.8 GATAATCATTTTCATTTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: sitA
Ortholog function: iron ABC transporter, periplasmic substrate-binding protein
Salmonella typhimurium LT2 STM2861 -99 4.5 GCAAATAAGAATTATTTTC
-93 4.2 AAGAATTATTTTCATTTAT
Citrobacter koseri ATCC BAA-895 CKO_04090 -84 4.5 GTAAATAAGAATTATTTTC
-78 4.2 AAGAATTATTTTCATTTAT
Citrobacter koseri ATCC BAA-895 CKO_00940 -111 4.1 GATAAAGATAATTTTTCTC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03078 -99 4.5 GCAAATAAGAATTATTTTC
-93 4.2 AAGAATTATTTTCATTTAT
Enterobacter sp. 638 Ent638_1111 -98 4.9 TTTAATGATAATTATTTTC
-92 4.5 GATAATTATTTTCATTTAA
Yersinia pestis KIM y1897 -39 5.2 GGTATTGATAATCATTTTC
-33 4.7 GATAATCATTTTCATTTGT
Serratia proteamaculans 568 Spro_2133 -41 5.4 GATATTGATAATCATTTTC
-35 4.6 GATAATCATTTTCATTTGA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2392 -53 5.1 GATATTGATAATTATTCTC
Proteus mirabilis HI4320 PMI1027 -63 4.2 TGAAATGATATTGATAATC
-57 5.5 GATATTGATAATCATTATC
Photorhabdus luminescens subsp. laumondii TTO1 plu2672 -49 5.2 GATATTGATAATCGTTATC
-43 4.5 GATAATCGTTATCATATAC
Position: -144
Score: 4.8
Sequence: ACTAATGATAATGGTTATC
Position: -138
Score: 5
Sequence: GATAATGGTTATCAATAGC
Locus tag: YmolA_01002036
YmolA_01002036 -144 4.8 ACTAATGATAATGGTTATC
-138 5 GATAATGGTTATCAATAGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: sapA
Ortholog function: ABC peptide transport periplasmic protein
Erwinia amylovora ATCC 49946 EAM_1842 -198 5.1 GTTAATAATAATCATTCTC
-192 5.2 AATAATCATTCTCATTATC
Edwardsiella tarda EIB202 ETAE_1870 -222 4.1 TTGAATGATAATGTTTATC
-216 4.8 GATAATGTTTATCAATATC
Proteus mirabilis HI4320 PMI1378 -131 4.7 GATAATCTTTATCATTAGC
Photorhabdus luminescens subsp. laumondii TTO1 plu2587 -141 4 ACAGATGATAATGGTTATC
-135 4.3 GATAATGGTTATCAATACG
Position: -229
Score: 4.4
Sequence: TTAAATAAGAATCATTCTT
Position: -223
Score: 3.8
Sequence: AAGAATCATTCTTTTTAGT
Position: -196
Score: 3.8
Sequence: TGTAATGTGAATGATTCTT
Position: -190
Score: 4.1
Sequence: GTGAATGATTCTTATAATA
Position: -187
Score: 3.5
Sequence: AATGATTCTTATAATAATT
Position: -184
Score: 4
Sequence: GATTCTTATAATAATTTAC
Position: -123
Score: 3.6
Sequence: TAAATTATTTATTGTTTTT
Locus tag: YmolA_01002152
YmolA_01002152 -229 4.4 TTAAATAAGAATCATTCTT
-223 3.8 AAGAATCATTCTTTTTAGT
-196 3.8 TGTAATGTGAATGATTCTT
-190 4.1 GTGAATGATTCTTATAATA
-187 3.5 AATGATTCTTATAATAATT
-184 4 GATTCTTATAATAATTTAC
-123 3.6 TAAATTATTTATTGTTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ftnA
Ortholog function: ferritin
Escherichia coli str. K-12 substr. MG1655 b1905 -127 3.4 GgTAATGcgttTtATTccC
-121 3 GcgttTtATtccCATTcgt
Salmonella typhimurium LT2 STM1935 -100 4 AATAATTAAATTTAATATT
Citrobacter koseri ATCC BAA-895 CKO_01042 -97 4.3 AATAATTAAATTTATTATT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02402 -161 4 ATAAATTAAAAGCATTCTC
-155 3.8 TAAAAGCATTCTCATTTAT
Enterobacter sp. 638 Ent638_2486 -103 3.7 TATTTTAATAAATAATATC
-97 3.6 AATAAATAATATCTTTATT
Erwinia amylovora ATCC 49946 EAM_2940 -131 4.4 TGGAATGATTATCAATTAC
Yersinia pestis KIM y2524 -93 4.4 AATAATGTGAATGATTATC
-87 4.1 GTGAATGATTATCATGATG
Serratia proteamaculans 568 Spro_1942 -174 4.5 GAAAATAGTTATCATAATT
-168 4 AGTTATCATAATTATTTAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2473 -158 4.6 TTAAATGATAATGAATATC
-152 4.8 GATAATGAATATCAATAGC
Proteus mirabilis HI4320 PMI1007 -184 4.7 GTTAATGATAATCAATTCC
-178 4.1 GATAATCAATTCCATTAAT
Photorhabdus luminescens subsp. laumondii TTO1 plu2689 -147 4.4 TTAAATGAGATTCATTTTC
-141 4.4 GAGATTCATTTTCATTTTT
Position: -64
Score: 4
Sequence: AGTAATGCAAATCATTTGT
Locus tag: YmolA_01002463
YmolA_01002463 -64 4 AGTAATGCAAATCATTTGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fatB
Ortholog function: iron ABC transporter, substrate-binding protein
Yersinia pestis KIM y4043 -26 4.8 GGTAATAAAAATCATTAGC
-20 4.2 AAAAATCATTAGCATTACT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2564 -86 4.2 GCGAATGATAATTAAATTC
-80 4.1 GATAATTAAATTCTTTATT
Proteus mirabilis HI4320 PMI2957 -121 4.1 GTGAATTAGTATCATTACT
Position: -138
Score: 4.3
Sequence: GCGCTTGATAATTATTATC
Position: -132
Score: 4.9
Sequence: GATAATTATTATCATTTGG
Locus tag: YmolA_01002495
YmolA_01002495 -138 4.3 GCGCTTGATAATTATTATC
-132 4.9 GATAATTATTATCATTTGG
Supported by regulated orthologs from reference regulons
Ortholog gene name: mntH
Ortholog function: Mn2+/Fe2+ transporter, NRAMP family
Escherichia coli str. K-12 substr. MG1655 b2392 -68 4.7 GAATTTGATAATCATTCTC
-62 4.2 GATAATCATTCTCGTTTGG
Salmonella typhimurium LT2 STM2408 -68 4.5 GCACTTGATAATCATTATC
-62 4.8 GATAATCATTATCAATAAA
Citrobacter koseri ATCC BAA-895 CKO_00404 -50 4.3 GCACTTGATAATCATTCTC
-44 4.5 GATAATCATTCTCAATAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02743 -68 4.3 GAACTTGATAATCATTCGC
-62 4.3 GATAATCATTCGCATTTTG
Enterobacter sp. 638 Ent638_2926 -67 4.8 GATCTTGATAATCATTCTC
-61 4.8 GATAATCATTCTCATTTTG
Yersinia pestis KIM y1500 -78 4 GCGCTTGATAATTATTCTC
-72 4.6 GATAATTATTCTCATTTAA
Serratia proteamaculans 568 Spro_3415 -66 4.3 GCACTTGATAATTATTATC
-60 5.2 GATAATTATTATCATTTAC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0843 -63 4.5 GCACTTGATAATCATTATC
-57 5.2 GATAATCATTATCATTTTT
Edwardsiella tarda EIB202 ETAE_1142 -134 4.5 GCAGTTGATAATCATTATC
Position: -173
Score: 4.7
Sequence: GCGAATGATTTTCACTATC
Locus tag: YmolA_01002522
YmolA_01002522 -173 4.7 GCGAATGATTTTCACTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: sfuA
Ortholog function: iron(III) ABC transporter, periplasmic protein
Yersinia pestis KIM y1526 -108 4.8 AACAATGATAATCATTTTT
-102 4.7 GATAATCATTTTTATTACC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3137 -169 4.2 CGAAATAATAATAACTATC
-163 4.7 AATAATAACTATCATTATT
-157 4.4 AACTATCATTATTATTATC
Position: -195
Score: 4.1
Sequence: GATAGTCATTATCAATTAG
Locus tag: YmolA_01002592
YmolA_01002592 -195 4.1 GATAGTCATTATCAATTAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: dps
Ortholog function: DNA protection ferritin-like protein
Salmonella typhimurium LT2 STM0831 -188 4.4 TAAAATGAGAATTATTACC
-136 4 TTTAATCAAAATAAATATT
Citrobacter koseri ATCC BAA-895 CKO_02310 -188 4.5 GTGAATGAGAATTATTAAC
-137 4.3 TTTAATCATTTTCAATATT
Enterobacter sp. 638 Ent638_1299 -118 4.1 TAACATTATTATCACTATT
Position: -124
Score: 4.9
Sequence: CAGAATGATAATCACTATC
Locus tag: YmolA_01002631
YmolA_01002631 -124 4.9 CAGAATGATAATCACTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yijD
Ortholog function: iron permease FTR1
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01045 -76 5 TGTAATGATAATCACTATC
-70 4.2 GATAATCACTATCATAAAT
Enterobacter sp. 638 Ent638_1545 -76 4.9 CGTAATGATAATCACTATC
Erwinia amylovora ATCC 49946 EAM_2059 -80 4.6 GATAATGATAATCCCTATC
Yersinia pestis KIM y2452 -84 4.4 CAGAATGATAATCACAATC
-78 4.3 GATAATCACAATCGTTTTA
Serratia proteamaculans 568 Spro_2929 -109 4.8 CAGAATGATAATCACTATC
Position: -338
Score: 5.6
Sequence: GATTATGATAATCATTATC
Locus tag: YmolA_01002686
YmolA_01002686 -338 5.6 GATTATGATAATCATTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: hasR
Ortholog function: TonB-dependent heme receptor
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1538 -102 5 GGTAATGATTTTTATTATC
-96 4.8 GATTTTTATTATCATTTTC
-90 4.1 TATTATCATTTTCATTAAG
Position: -63
Score: 4.5
Sequence: GATAATGATAAATATAATT
Position: -45
Score: 4.3
Sequence: TGATATAAGAATCATTCTC
Locus tag: YmolA_01002716
YmolA_01002716 -63 4.5 GATAATGATAAATATAATT
-45 4.3 TGATATAAGAATCATTCTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: iucA2
Ortholog function: aerobactin synthetase (subunit alpha)
Yersinia pestis KIM y3380 -63 4.8 GATAATGATAACCACTATT
Yersinia pestis KIM y3381 -63 4.8 GATAATGATAACCACTATT
Serratia proteamaculans 568 Spro_0922 -63 4.2 GATAACAATAAATATTATT
-45 4.1 TGATATAAGAATCATTCTC
Position: -93
Score: 4.8
Sequence: AATTATATTTATCATTATC
Position: -87
Score: 4.3
Sequence: ATTTATCATTATCAATAAT
Locus tag: YmolA_01002717
YmolA_01002717 -93 4.8 AATTATATTTATCATTATC
-87 4.3 ATTTATCATTATCAATAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: Spro_0923
Ortholog function: major facilitator superfamily MFS_1
Serratia proteamaculans 568 Spro_0923 -93 4.3 AATAATATTTATTGTTATC
Position: -338
Score: 4.5
Sequence: ACAAATGATAATTACTCTC
Locus tag: YmolA_01002981
YmolA_01002981 -338 4.5 ACAAATGATAATTACTCTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: adhE
Ortholog function: iron-containing aldehyde-alcohol dehydrogenase
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02199 -332 4 TTTAATGCTAATCGTTTTT
-326 3.2 GCTAATCGTTTTTTTAATT
Yersinia pestis KIM y2023 -339 5 GATAATGACAATCATTCTC
-333 3.7 GAcAATcATtcTCAaaAaa
Serratia proteamaculans 568 Spro_2704 -330 3.9 GTTATCAAGAATGATTCTC
-324 4.2 AAGAATGATTCTCAAAAAC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2326 -368 4.5 CCTAATGATATTGATTATC
-362 5.2 GATATTGATTATCAATATC
Edwardsiella tarda EIB202 ETAE_1508 -317 4 aAagATGAgAtTCATTcTC
-311 4.3 GAgAtTcATtcTCATTAaa
Proteus mirabilis HI4320 PMI1486 -300 4.5 GTAATTAATTATCATTACC
-294 4 AATTATCATTACCATTTAA
Photorhabdus luminescens subsp. laumondii TTO1 plu2496 -191 3.9 ccaAtcaATAATaATTATC
-185 4.4 AATAATAATTATCACTGAC
Position: -90
Score: 4.9
Sequence: GGCATTGATAATCATTTTC
Position: -84
Score: 5.2
Sequence: GATAATCATTTTCAATATC
Locus tag: YmolA_01003016
YmolA_01003016 -90 4.9 GGCATTGATAATCATTTTC
-84 5.2 GATAATCATTTTCAATATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: sodA
Ortholog function: manganese/iron superoxide dismutase
Escherichia coli str. K-12 substr. MG1655 b3908 -99 4.7 GGCATTGATAATCATTTTC
-93 5 GATAATCATTTTCAATATC
Salmonella typhimurium LT2 STM4055 -99 4.7 GGCATTGATAATCATTTTC
-93 5 GATAATCATTTTCAATATC
Citrobacter koseri ATCC BAA-895 CKO_03093 -88 4.3 GGCATTGATAAGCATTTTC
-82 4.4 GATAAGCATTTTCAATATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04217 -88 4.3 GGCATTGATAAGCATTTTC
-82 4 GATAAGCATTTTCAATACC
Enterobacter sp. 638 Ent638_4063 -100 4.7 GGCATTGATAATCATTTTC
-94 5 GATAATCATTTTCAATATC
Yersinia pestis KIM y4080 -104 4.4 AGGTTTGATAATCATTTTC
-98 5 GATAATCATTTTCAATATC
Serratia proteamaculans 568 Spro_0081 -105 4.7 GGCATTGATAATCATTTTC
-99 5 GATAATCATTTTCAATATC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0092 -105 4.9 AATAATCATTTTCAATATC
Proteus mirabilis HI4320 PMI3036 -95 4.6 GGATATGATAATGATTTTC
-89 5.2 GATAATGATTTTCATTAAC
Photorhabdus luminescens subsp. laumondii TTO1 plu0075 -102 4.3 GGTATTGATAAGCATTTCC
Position: -37
Score: 5.2
Sequence: GATATTAGTTATCATTATC
Locus tag: YmolA_01003074
YmolA_01003074 -37 5.2 GATATTAGTTATCATTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yjjZ
Ortholog function: putative membrane protein
Escherichia coli str. K-12 substr. MG1655 b4567 -60 4.4 GCAAATGATAAAAATTATC
-37 5.2 GATATTGGTTATCATTATC
Salmonella typhimurium LT2 STM4552 -37 5.2 GATATTGGTTATCATTATC
-31 4.2 GGTTATCATTATCAATTCC
Citrobacter koseri ATCC BAA-895 CKO_03427 2 4.9 GCTATTGGTTATCATTATC
8 4.1 GGTTATCATTATCGGTATC
Enterobacter sp. 638 Ent638_0529 -37 5.2 GATATTGGTTATCATTATC
-31 4 GGTTATCATTATCATATTG
Erwinia amylovora ATCC 49946 EAM_0565 -70 4.3 CAAAGTGATAATGATTAAC
-64 4.3 GATAATGATTAACATATGC
-47 4.9 GCTATTGGTAATCATTATC
-41 4.8 GGTAATCATTATCATTTAT
Yersinia pestis KIM y3754 -4 4.9 GATATTGGTTATGATTATC
2 5.2 GGTTATGATTATCATTATC
Serratia proteamaculans 568 Spro_0646 -39 4.7 GATATTAGTTCTCATTATC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0738 -89 5 GATATTAGTTATCATTATC
-83 4.5 AGTTATCATTATCATTTTT
Proteus mirabilis HI4320 PMI2497 -27 5.3 AATAATGAAAATCATTATC
-21 5.2 GAAAATCATTATCATTAAC
Photorhabdus luminescens subsp. laumondii TTO1 plu4253 -92 5.2 GATATTGGTAATCATTATC
-86 4.7 GGTAATCATTATCATTTGT
Position: -45
Score: 4.6
Sequence: AATGATGATAATAGTTATC
Locus tag: YmolA_01003137
YmolA_01003137 -45 4.6 AATGATGATAATAGTTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: gpmA
Ortholog function: phosphoglyceromutase 1
Escherichia coli str. K-12 substr. MG1655 b0755 -47 5 TATAATGAGAATTATTATC
-41 4.7 GAGAATTATTATCATTAAA
Salmonella typhimurium LT2 STM0772 -47 5 TATAATGAGAATTATTATC
-41 4.5 GAGAATTATTATCATTACA
Citrobacter koseri ATCC BAA-895 CKO_02381 -46 5 TATAATGAGAATTATTATC
-40 4.5 GAGAATTATTATCATTCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00768 -96 4.6 TATAATGAGAATAGTTATC
Enterobacter sp. 638 Ent638_1246 -164 4.7 TATAATGAGAATTGTTATC
-158 4.1 GAGAATTGTTATCATTCAA
Yersinia pestis KIM y3048 -103 5.3 TATAATGATAATAATTATC
-97 4.6 GATAATAATTATCATTGAA
Serratia proteamaculans 568 Spro_1288 -51 4.9 TATAATGATTTTCGTTATC
Edwardsiella tarda EIB202 ETAE_2569 -49 4.6 CATGATGATAATAATTATC
-43 5.3 GATAATAATTATCATTATA
Position: -95
Score: 5.1
Sequence: GAAAATGATAATTAATTTC
Position: -89
Score: 5
Sequence: GATAATTAATTTCATTATC
Locus tag: YmolA_01003491
YmolA_01003491 -95 5.1 GAAAATGATAATTAATTTC
-89 5 GATAATTAATTTCATTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yddB
Ortholog function: TonB-dependent receptor
Escherichia coli str. K-12 substr. MG1655 b1495 -4 4.4 GCTAATGATAACCATTCCC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0878 -269 4.4 TAAAACGATTATCATTTGT
-263 4.1 GATTATCATTTGTATTATT
Proteus mirabilis HI4320 PMI3706 -115 4.2 GATATTGCTTATTATTAAT
-75 4.2 AATATTGATTATAAAAATT
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