Propagation of Fur regulog to Yersinia frederiksenii ATCC 33641

Reference regulog properties
Source regulog:	Fur - Enterobacteriales
Regulator type:	Transcription factor
Regulator family:	FUR
Regulation mode:	repressor (activator)
Biological process:	Iron homeostasis
Effector:	Iron ion, (Fe2+)
Phylum:	Proteobacteria/gamma
Propagated regulon:
Target genome	Yersinia frederiksenii ATCC 33641
Orthologous TF(s)	YfreA_01003196
Regulated genes	37

Built upon 656 sites [see more]

Predicted regulatory interactions in *Yersinia frederiksenii ATCC 33641*
	Locus tag	Position	Score	Sequence
Position: -101 Score: 4.9 Sequence: CAGAATGATAATCACTATC Locus tag: YfreA_01000329
	YfreA_01000329	-101	4.9	CAGAATGATAATCACTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yijD
Ortholog function: iron permease FTR1
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_01045	-76	5	TGTAATGATAATCACTATC
		-70	4.2	GATAATCACTATCATAAAT
Enterobacter sp. 638	Ent638_1545	-76	4.9	CGTAATGATAATCACTATC
Erwinia amylovora ATCC 49946	EAM_2059	-80	4.6	GATAATGATAATCCCTATC
Yersinia pestis KIM	y2452	-84	4.4	CAGAATGATAATCACAATC
		-78	4.3	GATAATCACAATCGTTTTA
Serratia proteamaculans 568	Spro_2929	-109	4.8	CAGAATGATAATCACTATC

Position: -106 Score: 4.7 Sequence: GCGAATGATTTTCACTATC Locus tag: YfreA_01000742
	YfreA_01000742	-106	4.7	GCGAATGATTTTCACTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: sfuA
Ortholog function: iron(III) ABC transporter, periplasmic protein
Yersinia pestis KIM	y1526	-108	4.8	AACAATGATAATCATTTTT
		-102	4.7	GATAATCATTTTTATTACC
Erwinia carotovora subsp. atroseptica SCRI1043	ECA3137	-169	4.2	CGAAATAATAATAACTATC
		-163	4.7	AATAATAACTATCATTATT
		-157	4.4	AACTATCATTATTATTATC

Position: -139 Score: 4.3 Sequence: GCGCTTGATAATTATTATC Position: -133 Score: 5 Sequence: GATAATTATTATCATTTAA Locus tag: YfreA_01000771
	YfreA_01000771	-139	4.3	GCGCTTGATAATTATTATC
		-133	5	GATAATTATTATCATTTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: mntH
Ortholog function: Mn2+/Fe2+ transporter, NRAMP family
Escherichia coli str. K-12 substr. MG1655	b2392	-68	4.7	GAATTTGATAATCATTCTC
		-62	4.2	GATAATCATTCTCGTTTGG
Salmonella typhimurium LT2	STM2408	-68	4.5	GCACTTGATAATCATTATC
		-62	4.8	GATAATCATTATCAATAAA
Citrobacter koseri ATCC BAA-895	CKO_00404	-50	4.3	GCACTTGATAATCATTCTC
		-44	4.5	GATAATCATTCTCAATAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_02743	-68	4.3	GAACTTGATAATCATTCGC
		-62	4.3	GATAATCATTCGCATTTTG
Enterobacter sp. 638	Ent638_2926	-67	4.8	GATCTTGATAATCATTCTC
		-61	4.8	GATAATCATTCTCATTTTG
Yersinia pestis KIM	y1500	-78	4	GCGCTTGATAATTATTCTC
		-72	4.6	GATAATTATTCTCATTTAA
Serratia proteamaculans 568	Spro_3415	-66	4.3	GCACTTGATAATTATTATC
		-60	5.2	GATAATTATTATCATTTAC
Erwinia carotovora subsp. atroseptica SCRI1043	ECA0843	-63	4.5	GCACTTGATAATCATTATC
		-57	5.2	GATAATCATTATCATTTTT
Edwardsiella tarda EIB202	ETAE_1142	-134	4.5	GCAGTTGATAATCATTATC

Position: 21 Score: 4.6 Sequence: GCTAATGATATTGATAATC Position: 27 Score: 5.6 Sequence: GATATTGATAATCATTTTC Locus tag: YfreA_01000866
	YfreA_01000866	21	4.6	GCTAATGATATTGATAATC
		27	5.6	GATATTGATAATCATTTTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: sitA
Ortholog function: iron ABC transporter, periplasmic substrate-binding protein
Salmonella typhimurium LT2	STM2861	-99	4.5	GCAAATAAGAATTATTTTC
		-93	4.2	AAGAATTATTTTCATTTAT
Citrobacter koseri ATCC BAA-895	CKO_04090	-84	4.5	GTAAATAAGAATTATTTTC
		-78	4.2	AAGAATTATTTTCATTTAT
Citrobacter koseri ATCC BAA-895	CKO_00940	-111	4.1	GATAAAGATAATTTTTCTC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_03078	-99	4.5	GCAAATAAGAATTATTTTC
		-93	4.2	AAGAATTATTTTCATTTAT
Enterobacter sp. 638	Ent638_1111	-98	4.9	TTTAATGATAATTATTTTC
		-92	4.5	GATAATTATTTTCATTTAA
Yersinia pestis KIM	y1897	-39	5.2	GGTATTGATAATCATTTTC
		-33	4.7	GATAATCATTTTCATTTGT
Serratia proteamaculans 568	Spro_2133	-41	5.4	GATATTGATAATCATTTTC
		-35	4.6	GATAATCATTTTCATTTGA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA2392	-53	5.1	GATATTGATAATTATTCTC
Proteus mirabilis HI4320	PMI1027	-63	4.2	TGAAATGATATTGATAATC
		-57	5.5	GATATTGATAATCATTATC
Photorhabdus luminescens subsp. laumondii TTO1	plu2672	-49	5.2	GATATTGATAATCGTTATC
		-43	4.5	GATAATCGTTATCATATAC

Position: -52 Score: 4.9 Sequence: GCAGATGATAATCATTATC Locus tag: YfreA_01000896
	YfreA_01000896	-52	4.9	GCAGATGATAATCATTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: hemP
Ortholog function: hemin uptake protein
Escherichia coli str. K-12 substr. MG1655	b1705	-47	4.1	AATATTGATAATAAGAATC
		-41	4.6	GATAATAAGAATCATTGTT
Salmonella typhimurium LT2	STM1346	-47	4.5	ATTATTGATAATAATAATC
		-41	4.7	GATAATAATAATCATTGTG
Citrobacter koseri ATCC BAA-895	CKO_01729	-50	4.7	AATATTGATAATAATAATC
		-44	4.9	GATAATAATAATCATTGTT
Citrobacter koseri ATCC BAA-895	CKO_03737	14	4.1	CTTGATGATAATCATTCTT
		20	4.8	GATAATCATTCTTGTTATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_02163	-10	4.8	ATTATTGATAATGATTATC
		-4	5.1	GATAATGATTATCATTGTT
Enterobacter sp. 638	Ent638_1742	-50	4.2	TTTGTTGATAATGATTATC
		-44	5.1	GATAATGATTATCATTGTT
Serratia proteamaculans 568	Spro_2170	-68	4	TCACATGATAATGATTCTC
		-62	4.6	GATAATGATTCTCACTTTG
Edwardsiella tarda EIB202	ETAE_1796	-10	4.1	TTATACGATAATGATTATC
		-4	5.1	GATAATGATTATCATTAAG
Proteus mirabilis HI4320	PMI1424	-52	5.1	GATAACGATAATGATTATC
		-46	5.4	GATAATGATTATCATAATC
		-40	4.4	GATTATCATAATCATAACC
Photorhabdus luminescens subsp. laumondii TTO1	plu2631	-54	4.7	TATAACGATAATAATTCTC
		-48	4.6	GATAATAATTCTCACTATG

Position: -78 Score: 4.6 Sequence: TGAAGTGATAATTATTATC Position: -72 Score: 4.9 Sequence: GATAATTATTATCACTACC Locus tag: YfreA_01000903
	YfreA_01000903	-78	4.6	TGAAGTGATAATTATTATC
		-72	4.9	GATAATTATTATCACTACC
Supported by regulated orthologs from reference regulons
Ortholog gene name: sufA
Ortholog function: scaffold protein for iron-sulfur cluster assembly
Escherichia coli str. K-12 substr. MG1655	b1684	-65	4.4	TGAACTGATAATCATTATC
		-59	5.1	GATAATCATTATCACTAAC
Salmonella typhimurium LT2	STM1369	-66	4.7	TGAAGTGATAATCATTATC
		-60	5.1	GATAATCATTATCACTAAC
Citrobacter koseri ATCC BAA-895	CKO_01717	-66	4.7	TGAAGTGATAATCATTATC
		-60	5.1	GATAATCATTATCACTAAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_02141	-66	4.7	TGAAGTGATAATCATTATC
		-60	5.1	GATAATCATTATCACTAAC
Enterobacter sp. 638	Ent638_1760	-67	4.4	TGAAGTGATAATCGTTATC
		-61	4.7	GATAATCGTTATCACTAAC
Yersinia pestis KIM	y1934	-129	4.5	TGAAGTGATAATTATTATC
		-123	4.8	GATAATTATTATCACTACC
Serratia proteamaculans 568	Spro_2179	-77	4.4	TGAAGTGATAATCGTTATC
		-71	4.7	GATAATCGTTATCACTAAC
Proteus mirabilis HI4320	PMI1416	-66	4.4	GATAAGGGTTATCATTACC
		-60	4	GGTTATCATTACCATTAGA
Photorhabdus luminescens subsp. laumondii TTO1	plu2622	-87	4.4	GATAAAGGTTATCATTACC
		-81	4.3	GGTTATCATTACCATTATA

Position: -302 Score: 4.3 Sequence: ATTGATGATAATAGTTATC Position: -296 Score: 4.9 Sequence: GATAATAGTTATCAATAGC Locus tag: YfreA_01000958
	YfreA_01000958	-302	4.3	ATTGATGATAATAGTTATC
		-296	4.9	GATAATAGTTATCAATAGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: sapA
Ortholog function: ABC peptide transport periplasmic protein
Erwinia amylovora ATCC 49946	EAM_1842	-198	5.1	GTTAATAATAATCATTCTC
		-192	5.2	AATAATCATTCTCATTATC
Edwardsiella tarda EIB202	ETAE_1870	-222	4.1	TTGAATGATAATGTTTATC
		-216	4.8	GATAATGTTTATCAATATC
Proteus mirabilis HI4320	PMI1378	-131	4.7	GATAATCTTTATCATTAGC
Photorhabdus luminescens subsp. laumondii TTO1	plu2587	-141	4	ACAGATGATAATGGTTATC
		-135	4.3	GATAATGGTTATCAATACG

Position: -203 Score: 4.2 Sequence: AGAAATCAGACTCATTAAT Position: -190 Score: 4.2 Sequence: ATTAATTATAAAAATTAAC Position: -132 Score: 4.5 Sequence: GAATATGAAAATGATTCTC Position: -126 Score: 4.9 Sequence: GAAAATGATTCTCACTATT Locus tag: YfreA_01001134
	YfreA_01001134	-203	4.2	AGAAATCAGACTCATTAAT
		-190	4.2	ATTAATTATAAAAATTAAC
		-132	4.5	GAATATGAAAATGATTCTC
		-126	4.9	GAAAATGATTCTCACTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: feoA
Ortholog function: ferrous iron transport protein A
Escherichia coli str. K-12 substr. MG1655	b3408	-138	3.4	GcTgATagaAAcCATTcTC
		-132	4.5	AGAAACCATTCTCATTATC
Salmonella typhimurium LT2	STM3505	-140	3.5	GAagATagaAAcCATTcTC
		-133	4.5	AGAAACCATTCTCATTATC
Citrobacter koseri ATCC BAA-895	CKO_04830	-139	4.1	GATGATAAAAACCATTCTC
		-133	4.7	AAAAACCATTCTCATTATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_03778	-133	4.1	GATGATAAAAACCATTCTC
		-127	4.7	AAAAACCATTCTCATTATC
Enterobacter sp. 638	Ent638_3821	-62	4.5	AGAAACCATTCTCATTATC
Yersinia pestis KIM	y3912	-118	4.1	GAGCATGAAAATAATTCTC
		-112	4.4	GAAAATAATTCTCAGTATT
Serratia proteamaculans 568	Spro_4628	-155	4.3	GAATACGATAATGATTCTC
		-149	4.9	GATAATGATTCTCACTATT
Edwardsiella tarda EIB202	ETAE_3283	-163	4.3	GAAAACGATTATCAGTTTT
		-157	4.1	GATTATCAGTTTTATTATA
Proteus mirabilis HI4320	PMI2920	-138	4	AAAGATGGTTATAATTCTC
		-132	4.3	GGTTATAATTCTCATTTGC
		-59	4.8	GTTAATAATTATCAGTATC
		-53	4.6	AATTATCAGTATCATTATT
Photorhabdus luminescens subsp. laumondii TTO1	plu0209	-244	4	AATGTTGGTTATTATTCTC
		-238	4.2	GGTTATTATTCTCATTTGC

Position: -127 Score: 5.5 Sequence: GACAATGATAATCATTATC Position: -121 Score: 5.2 Sequence: GATAATCATTATCACTCTC Locus tag: YfreA_01001167
	YfreA_01001167	-127	5.5	GACAATGATAATCATTATC
		-121	5.2	GATAATCATTATCACTCTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yhhY
Ortholog function: GCN5-related N-acetyltransferase
Escherichia coli str. K-12 substr. MG1655	b3441	-119	4.9	GACAATAATAATCATTCTC
		-113	4.7	AATAATCATTCTCATTCGC
Erwinia amylovora ATCC 49946	EAM_3278	-118	4.9	GGCAATAATAATCATTATC
		-112	4.9	AATAATCATTATCATTCGC
Serratia proteamaculans 568	Spro_4654	-128	4.6	CGCAATAATAATCATTATC
		-122	4.7	AATAATCATTATCATTCGT

Position: -95 Score: 4.9 Sequence: ACTAATGATAATTACTATC Position: -89 Score: 4.2 Sequence: GATAATTACTATCAATCCC Locus tag: YfreA_01002030
	YfreA_01002030	-95	4.9	ACTAATGATAATTACTATC
		-89	4.2	GATAATTACTATCAATCCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: exbB
Ortholog function: TonB-dependent siderophore transporter component ExbB
Escherichia coli str. K-12 substr. MG1655	b3006	-82	4.1	AGTAATGAGAACGACTATC
Salmonella typhimurium LT2	STM3159	-82	4.1	AGTAATGAGAACGACTATC
Citrobacter koseri ATCC BAA-895	CKO_04401	-97	4.1	AGTAATGAGAACGACTATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_03426	-97	4.3	ACTAATGAGAACCACTATC
Enterobacter sp. 638	Ent638_3417	-97	4.3	ACTAATGAGAACCACTATC
Yersinia pestis KIM	y3495	-71	4.8	ACTAATGATAATTACTATC
Serratia proteamaculans 568	Spro_4211	-94	4.4	AATAATGAGAACTACTATC
Erwinia carotovora subsp. atroseptica SCRI1043	ECA0358	-206	4.3	AATAATGAGAACGACTATC
Proteus mirabilis HI4320	PMI0029	-170	4.8	AGTAATGATAATTACTATC
Photorhabdus luminescens subsp. laumondii TTO1	plu3941	-98	5.1	AATAATGATAATTACTATC

Position: -182 Score: 5.2 Sequence: ACAAATGATTATTATTATC Position: -176 Score: 4.4 Sequence: GATTATTATTATCGTTTTG Position: -164 Score: 4.5 Sequence: CGTTTTGATTATCATTATT Position: -158 Score: 4.7 Sequence: GATTATCATTATTATTTAT Locus tag: YfreA_01002049
	YfreA_01002049	-182	5.2	ACAAATGATTATTATTATC
		-176	4.4	GATTATTATTATCGTTTTG
		-164	4.5	CGTTTTGATTATCATTATT
		-158	4.7	GATTATCATTATTATTTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ybdA
Ortholog function: enterobactin exporter EntS, MFS family
Escherichia coli str. K-12 substr. MG1655	b0591	-98	4.8	GATAATGAAATTAATTATC
		-92	4.9	GAAATTAATTATCGTTATC
Salmonella typhimurium LT2	STM0593	-98	4.9	GATAATGATAGTAATTATC
		-92	4.8	GATAGTAATTATCGTTATC
Citrobacter koseri ATCC BAA-895	CKO_02570	-99	4.9	GATAATGATAGTAATTATC
		-93	4.8	GATAGTAATTATCGTTATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_00609	-94	4.9	GATAATGATAGTAATTATC
		-88	4.8	GATAGTAATTATCGTTATC
Enterobacter sp. 638	Ent638_1123	-94	4.9	GATAATGATAGTAATTATC
		-88	4.8	GATAGTAATTATCGTTATC
Serratia proteamaculans 568	Spro_3423	-112	4.4	ATAAATGAGTTTTATTATC
		-106	4.4	GAGTTTTATTATCATTATT

Position: -53 Score: 5 Sequence: TATAATGATAATAGTTATC Locus tag: YfreA_01002377
	YfreA_01002377	-53	5	TATAATGATAATAGTTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: gpmA
Ortholog function: phosphoglyceromutase 1
Escherichia coli str. K-12 substr. MG1655	b0755	-47	5	TATAATGAGAATTATTATC
		-41	4.7	GAGAATTATTATCATTAAA
Salmonella typhimurium LT2	STM0772	-47	5	TATAATGAGAATTATTATC
		-41	4.5	GAGAATTATTATCATTACA
Citrobacter koseri ATCC BAA-895	CKO_02381	-46	5	TATAATGAGAATTATTATC
		-40	4.5	GAGAATTATTATCATTCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_00768	-96	4.6	TATAATGAGAATAGTTATC
Enterobacter sp. 638	Ent638_1246	-164	4.7	TATAATGAGAATTGTTATC
		-158	4.1	GAGAATTGTTATCATTCAA
Yersinia pestis KIM	y3048	-103	5.3	TATAATGATAATAATTATC
		-97	4.6	GATAATAATTATCATTGAA
Serratia proteamaculans 568	Spro_1288	-51	4.9	TATAATGATTTTCGTTATC
Edwardsiella tarda EIB202	ETAE_2569	-49	4.6	CATGATGATAATAATTATC
		-43	5.3	GATAATAATTATCATTATA

Position: -100 Score: 4.9 Sequence: GGCATTGATAATCATTTTC Position: -94 Score: 5.2 Sequence: GATAATCATTTTCAATATC Locus tag: YfreA_01002409
	YfreA_01002409	-100	4.9	GGCATTGATAATCATTTTC
		-94	5.2	GATAATCATTTTCAATATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: sodA
Ortholog function: manganese/iron superoxide dismutase
Escherichia coli str. K-12 substr. MG1655	b3908	-99	4.7	GGCATTGATAATCATTTTC
		-93	5	GATAATCATTTTCAATATC
Salmonella typhimurium LT2	STM4055	-99	4.7	GGCATTGATAATCATTTTC
		-93	5	GATAATCATTTTCAATATC
Citrobacter koseri ATCC BAA-895	CKO_03093	-88	4.3	GGCATTGATAAGCATTTTC
		-82	4.4	GATAAGCATTTTCAATATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_04217	-88	4.3	GGCATTGATAAGCATTTTC
		-82	4	GATAAGCATTTTCAATACC
Enterobacter sp. 638	Ent638_4063	-100	4.7	GGCATTGATAATCATTTTC
		-94	5	GATAATCATTTTCAATATC
Yersinia pestis KIM	y4080	-104	4.4	AGGTTTGATAATCATTTTC
		-98	5	GATAATCATTTTCAATATC
Serratia proteamaculans 568	Spro_0081	-105	4.7	GGCATTGATAATCATTTTC
		-99	5	GATAATCATTTTCAATATC
Erwinia carotovora subsp. atroseptica SCRI1043	ECA0092	-105	4.9	AATAATCATTTTCAATATC
Proteus mirabilis HI4320	PMI3036	-95	4.6	GGATATGATAATGATTTTC
		-89	5.2	GATAATGATTTTCATTAAC
Photorhabdus luminescens subsp. laumondii TTO1	plu0075	-102	4.3	GGTATTGATAAGCATTTCC

Position: -246 Score: 4.9 Sequence: AATAAAGATAATAATTATC Position: -240 Score: 4.9 Sequence: GATAATAATTATCATTGTA Locus tag: YfreA_01002870
	YfreA_01002870	-246	4.9	AATAAAGATAATAATTATC
		-240	4.9	GATAATAATTATCATTGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: foxA
Ortholog function: TonB-dependent siderophore receptor
Salmonella typhimurium LT2	STM0364	-26	4.5	GGTAATAATTCTTATTTAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_02304	-98	4.2	AATAATAATTCGCATTACT
Enterobacter sp. 638	Ent638_0493	-45	4.7	GGTAATAATTCTTATTAAC
Erwinia amylovora ATCC 49946	EAM_0358	-123	4.4	AAAAAAGATAATAATTCTC
		-117	5	GATAATAATTCTCATTTAC
Serratia proteamaculans 568	Spro_2736	-140	4.9	GATAAAGATAATAATTATC
		-134	5.2	GATAATAATTATCATTAAT

Position: -108 Score: 5.1 Sequence: GCAAATAATTATCATTAAC Locus tag: YfreA_01002916
	YfreA_01002916	-108	5.1	GCAAATAATTATCATTAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: viuB
Ortholog function: FAD-binding 9 siderophore-interacting domain protein
Serratia proteamaculans 568	Spro_2919	-65	4.5	GCAAACAATTCTCATTATC
Erwinia carotovora subsp. atroseptica SCRI1043	ECA2023	-72	4.4	CGAAATGATAATAGTTATC
Proteus mirabilis HI4320	PMI1437	-66	4.6	AATAGTGATAATGACTATC
		-60	5	GATAATGACTATCATTATT
Photorhabdus luminescens subsp. laumondii TTO1	plu2040	-97	5	TTTAATGATAATAATTATC
		-91	5.5	GATAATAATTATCATTTTC

Position: -65 Score: 4.7 Sequence: TTCATTGATAATCATTATC Position: -59 Score: 4.8 Sequence: GATAATCATTATCACTAAA Locus tag: YfreA_01002926
	YfreA_01002926	-65	4.7	TTCATTGATAATCATTATC
		-59	4.8	GATAATCATTATCACTAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fhuF
Ortholog function: ferric iron reductase involved in ferric hydroximate transport
Escherichia coli str. K-12 substr. MG1655	b4367	-122	5.1	GATAATGATAACCAATATC
		-99	4.5	GATAATTTTTATCATTTGC
		-34	4	AGCAATCATTATCATTTAG
Salmonella typhimurium LT2	STM4550	-238	4	GGAATTGATAATGATAACC
		-232	5.1	GATAATGATAACCAATATC
Citrobacter koseri ATCC BAA-895	CKO_03429	-234	4.8	GATAATGATAACCAATAGC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_04821	-44	4.5	AATATCAGTAATCATTATC
		-38	4.4	AGTAATCATTATCATTTAG
Enterobacter sp. 638	Ent638_0527	-237	5.1	GATAATGATAACCAATATC
Yersinia pestis KIM	y2642	-67	4.9	GCTATTGATAATCACTATC
		-61	4.4	GATAATCACTATCATTCTG
Photorhabdus luminescens subsp. laumondii TTO1	plu4627	-100	4.3	GACAATGATAATAATAATA
		-94	5.3	GATAATAATAATAATTATC
		-88	4.9	AATAATAATTATCATAATT
		-82	4.1	AATTATCATAATTATATTT

Position: -41 Score: 4.7 Sequence: GTAAATAAATCTCATTATC Locus tag: YfreA_01002937
	YfreA_01002937	-41	4.7	GTAAATAAATCTCATTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yijD1
Ortholog function: putative iron permease FTR1
Citrobacter koseri ATCC BAA-895	CKO_02057	-98	5.3	TATAATGATAATAATTATC
		-92	5	GATAATAATTATCATTTGT
Yersinia pestis KIM	y2370	-47	4.1	GTTAATGTTAATAAATCTC
		-41	4.5	GTTAATAAATCTCATTATT
Erwinia carotovora subsp. atroseptica SCRI1043	ECA1510	-41	4.7	GATAATAAGAATAAATATC
		-35	4.2	AAGAATAAATATCATTTGT

Position: -325 Score: 5.3 Sequence: GATAATGATAACCAATATC Locus tag: YfreA_01003315
	YfreA_01003315	-325	5.3	GATAATGATAACCAATATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: hmsT
Ortholog function: diguanylate cyclase, involved in hemin storage
Salmonella typhimurium LT2	STM4551	-238	4	GGAATTGATAATGATAACC
		-232	5.1	GATAATGATAACCAATATC
Citrobacter koseri ATCC BAA-895	CKO_03428	-234	4.8	GATAATGATAACCAATAGC
Enterobacter sp. 638	Ent638_0528	-237	5.1	GATAATGATAACCAATATC
Erwinia amylovora ATCC 49946	EAM_0564	-224	4.5	ATAAATGATAATGATTACC
		-218	4.8	GATAATGATTACCAATAGC
		-201	4.3	GCATATGTTAATCATTATC
		-195	4.4	GTTAATCATTATCACTTTG
Yersinia pestis KIM	y3756	-275	5	gataatgataatcataacc
		-269	4.9	gataatcataaccaatatc
Serratia proteamaculans 568	Spro_0645	-243	4.6	GATAATGAGAACTAATATC

Position: -101 Score: 5.3 Sequence: GATATTGGTTATCATTATC Locus tag: YfreA_01003316
	YfreA_01003316	-101	5.3	GATATTGGTTATCATTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yjjZ
Ortholog function: putative membrane protein
Escherichia coli str. K-12 substr. MG1655	b4567	-60	4.4	GCAAATGATAAAAATTATC
		-37	5.2	GATATTGGTTATCATTATC
Salmonella typhimurium LT2	STM4552	-37	5.2	GATATTGGTTATCATTATC
		-31	4.2	GGTTATCATTATCAATTCC
Citrobacter koseri ATCC BAA-895	CKO_03427	2	4.9	GCTATTGGTTATCATTATC
		8	4.1	GGTTATCATTATCGGTATC
Enterobacter sp. 638	Ent638_0529	-37	5.2	GATATTGGTTATCATTATC
		-31	4	GGTTATCATTATCATATTG
Erwinia amylovora ATCC 49946	EAM_0565	-70	4.3	CAAAGTGATAATGATTAAC
		-64	4.3	GATAATGATTAACATATGC
		-47	4.9	GCTATTGGTAATCATTATC
		-41	4.8	GGTAATCATTATCATTTAT
Yersinia pestis KIM	y3754	-4	4.9	GATATTGGTTATGATTATC
		2	5.2	GGTTATGATTATCATTATC
Serratia proteamaculans 568	Spro_0646	-39	4.7	GATATTAGTTCTCATTATC
Erwinia carotovora subsp. atroseptica SCRI1043	ECA0738	-89	5	GATATTAGTTATCATTATC
		-83	4.5	AGTTATCATTATCATTTTT
Proteus mirabilis HI4320	PMI2497	-27	5.3	AATAATGAAAATCATTATC
		-21	5.2	GAAAATCATTATCATTAAC
Photorhabdus luminescens subsp. laumondii TTO1	plu4253	-92	5.2	GATATTGGTAATCATTATC
		-86	4.7	GGTAATCATTATCATTTGT

Position: -64 Score: 4.4 Sequence: AGTAATGCAAATCATTAGC Position: -58 Score: 4.2 Sequence: GCAAATCATTAGCGTTAGC Locus tag: YfreA_01003439
	YfreA_01003439	-64	4.4	AGTAATGCAAATCATTAGC
		-58	4.2	GCAAATCATTAGCGTTAGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fatB
Ortholog function: iron ABC transporter, substrate-binding protein
Yersinia pestis KIM	y4043	-26	4.8	GGTAATAAAAATCATTAGC
		-20	4.2	AAAAATCATTAGCATTACT
Erwinia carotovora subsp. atroseptica SCRI1043	ECA2564	-86	4.2	GCGAATGATAATTAAATTC
		-80	4.1	GATAATTAAATTCTTTATT
Proteus mirabilis HI4320	PMI2957	-121	4.1	GTGAATTAGTATCATTACT

Position: -338 Score: 4.9 Sequence: GCTAATGATAATTACTCTC Locus tag: YfreA_01003559
	YfreA_01003559	-338	4.9	GCTAATGATAATTACTCTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: adhE
Ortholog function: iron-containing aldehyde-alcohol dehydrogenase
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_02199	-332	4	TTTAATGCTAATCGTTTTT
		-326	3.2	GCTAATCGTTTTTTTAATT
Yersinia pestis KIM	y2023	-339	5	GATAATGACAATCATTCTC
		-333	3.7	GAcAATcATtcTCAaaAaa
Serratia proteamaculans 568	Spro_2704	-330	3.9	GTTATCAAGAATGATTCTC
		-324	4.2	AAGAATGATTCTCAAAAAC
Erwinia carotovora subsp. atroseptica SCRI1043	ECA2326	-368	4.5	CCTAATGATATTGATTATC
		-362	5.2	GATATTGATTATCAATATC
Edwardsiella tarda EIB202	ETAE_1508	-317	4	aAagATGAgAtTCATTcTC
		-311	4.3	GAgAtTcATtcTCATTAaa
Proteus mirabilis HI4320	PMI1486	-300	4.5	GTAATTAATTATCATTACC
		-294	4	AATTATCATTACCATTTAA
Photorhabdus luminescens subsp. laumondii TTO1	plu2496	-191	3.9	ccaAtcaATAATaATTATC
		-185	4.4	AATAATAATTATCACTGAC

Position: -283 Score: 3.6 Sequence: AGAAATAATATTCACCTTC Position: -231 Score: 4.3 Sequence: TCAAATAAGAATCATTCTT Position: -225 Score: 3.8 Sequence: AAGAATCATTCTTTTTAGT Position: -198 Score: 5.2 Sequence: GGTAATGATAATGATTATT Position: -195 Score: 3.9 Sequence: AATGATAATGATTATTATA Position: -192 Score: 5 Sequence: GATAATGATTATTATAATA Position: -189 Score: 4.3 Sequence: AATGATTATTATAATAATC Position: -186 Score: 3.6 Sequence: GATTATTATAATAATCAAA Position: -163 Score: 3.5 Sequence: CACGATAATATTTGTTATC Locus tag: YfreA_01003903
	YfreA_01003903	-283	3.6	AGAAATAATATTCACCTTC
		-231	4.3	TCAAATAAGAATCATTCTT
		-225	3.8	AAGAATCATTCTTTTTAGT
		-198	5.2	GGTAATGATAATGATTATT
		-195	3.9	AATGATAATGATTATTATA
		-192	5	GATAATGATTATTATAATA
		-189	4.3	AATGATTATTATAATAATC
		-186	3.6	GATTATTATAATAATCAAA
		-163	3.5	CACGATAATATTTGTTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ftnA
Ortholog function: ferritin
Escherichia coli str. K-12 substr. MG1655	b1905	-127	3.4	GgTAATGcgttTtATTccC
		-121	3	GcgttTtATtccCATTcgt
Salmonella typhimurium LT2	STM1935	-100	4	AATAATTAAATTTAATATT
Citrobacter koseri ATCC BAA-895	CKO_01042	-97	4.3	AATAATTAAATTTATTATT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_02402	-161	4	ATAAATTAAAAGCATTCTC
		-155	3.8	TAAAAGCATTCTCATTTAT
Enterobacter sp. 638	Ent638_2486	-103	3.7	TATTTTAATAAATAATATC
		-97	3.6	AATAAATAATATCTTTATT
Erwinia amylovora ATCC 49946	EAM_2940	-131	4.4	TGGAATGATTATCAATTAC
Yersinia pestis KIM	y2524	-93	4.4	AATAATGTGAATGATTATC
		-87	4.1	GTGAATGATTATCATGATG
Serratia proteamaculans 568	Spro_1942	-174	4.5	GAAAATAGTTATCATAATT
		-168	4	AGTTATCATAATTATTTAA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA2473	-158	4.6	TTAAATGATAATGAATATC
		-152	4.8	GATAATGAATATCAATAGC
Proteus mirabilis HI4320	PMI1007	-184	4.7	GTTAATGATAATCAATTCC
		-178	4.1	GATAATCAATTCCATTAAT
Photorhabdus luminescens subsp. laumondii TTO1	plu2689	-147	4.4	TTAAATGAGATTCATTTTC
		-141	4.4	GAGATTCATTTTCATTTTT

Position: -49 Score: 4.3 Sequence: AATAAGCATTCTCATTAGT Locus tag: YfreA_01003923
	YfreA_01003923	-49	4.3	AATAAGCATTCTCATTAGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fcuA
Ortholog function: TonB-dependent siderophore receptor
Citrobacter koseri ATCC BAA-895	CKO_03725	-192	4.3	GATAATGAGTTTTACTCTC
		15	4.1	GCAAAAAATAATTATTCTC
Enterobacter sp. 638	Ent638_1058	-215	4.6	GATAATGAGTATAGTTCTC
		-209	4.1	GAGTATAGTTCTCATTCTC
Erwinia carotovora subsp. atroseptica SCRI1043	ECA0731	-46	4.6	AATAATGAAAATAATAATC
		-40	5.2	GAAAATAATAATCATTATT
		-34	5	AATAATCATTATTATTATT
Edwardsiella tarda EIB202	ETAE_0617	15	4.3	TATTATAAAAATCATTTTT
		21	4.4	AAAAATCATTTTTATTTTT

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of Fur regulog to Yersinia frederiksenii ATCC 33641

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --