Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Fur regulog to Pectobacterium wasabiae WPP163

Reference regulog properties
Source regulog: Fur - Enterobacteriales
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor (activator)
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Pectobacterium wasabiae WPP163
Orthologous TF(s) Pecwa_3125
Regulated genes 46
Built upon 656 sites [see more]
Predicted regulatory interactions in Pectobacterium wasabiae WPP163
Locus tag Position Score Sequence
Position: -157
Score: 4.4
Sequence: ACAAACGATAATGATTAAC
Position: -151
Score: 4.3
Sequence: GATAATGATTAACATATTG
Position: -139
Score: 5
Sequence: CATATTGATAATAATTATC
Position: -133
Score: 5.5
Sequence: GATAATAATTATCATTACC
Position: -110
Score: 4
Sequence: GATAATTAATGTTATTCGC
Locus tag: Pecwa_0337
Pecwa_0337 -157 4.4 ACAAACGATAATGATTAAC
-151 4.3 GATAATGATTAACATATTG
-139 5 CATATTGATAATAATTATC
-133 5.5 GATAATAATTATCATTACC
-110 4 GATAATTAATGTTATTCGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: hmuR
Ortholog function: TonB-dependent outer membrane receptor
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03087 -133 4 GATAATACCTATCATTACC
Erwinia amylovora ATCC 49946 EAM_1726 -140 4.2 TTTGTTGATAATGATTATC
-134 5.1 GATAATGATTATCATTTGT
Position: -120
Score: 4.4
Sequence: AATAATGAGAACGACTATC
Locus tag: Pecwa_0388
Pecwa_0388 -120 4.4 AATAATGAGAACGACTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: exbB
Ortholog function: TonB-dependent siderophore transporter component ExbB
Escherichia coli str. K-12 substr. MG1655 b3006 -82 4.1 AGTAATGAGAACGACTATC
Salmonella typhimurium LT2 STM3159 -82 4.1 AGTAATGAGAACGACTATC
Citrobacter koseri ATCC BAA-895 CKO_04401 -97 4.1 AGTAATGAGAACGACTATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03426 -97 4.3 ACTAATGAGAACCACTATC
Enterobacter sp. 638 Ent638_3417 -97 4.3 ACTAATGAGAACCACTATC
Yersinia pestis KIM y3495 -71 4.8 ACTAATGATAATTACTATC
Serratia proteamaculans 568 Spro_4211 -94 4.4 AATAATGAGAACTACTATC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0358 -206 4.3 AATAATGAGAACGACTATC
Proteus mirabilis HI4320 PMI0029 -170 4.8 AGTAATGATAATTACTATC
Photorhabdus luminescens subsp. laumondii TTO1 plu3941 -98 5.1 AATAATGATAATTACTATC
Position: -42
Score: 4.5
Sequence: AACAAAGATAATAATTATC
Position: -36
Score: 5.1
Sequence: GATAATAATTATCATTTCT
Locus tag: Pecwa_0825
Pecwa_0825 -42 4.5 AACAAAGATAATAATTATC
-36 5.1 GATAATAATTATCATTTCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fcuA
Ortholog function: TonB-dependent siderophore receptor
Citrobacter koseri ATCC BAA-895 CKO_03725 -192 4.3 GATAATGAGTTTTACTCTC
15 4.1 GCAAAAAATAATTATTCTC
Enterobacter sp. 638 Ent638_1058 -215 4.6 GATAATGAGTATAGTTCTC
-209 4.1 GAGTATAGTTCTCATTCTC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0731 -46 4.6 AATAATGAAAATAATAATC
-40 5.2 GAAAATAATAATCATTATT
-34 5 AATAATCATTATTATTATT
Edwardsiella tarda EIB202 ETAE_0617 15 4.3 TATTATAAAAATCATTTTT
21 4.4 AAAAATCATTTTTATTTTT
Position: -89
Score: 5.2
Sequence: GATATTAGTTATCATTATC
Position: -83
Score: 4.8
Sequence: AGTTATCATTATCATTTTT
Locus tag: Pecwa_0833
Pecwa_0833 -89 5.2 GATATTAGTTATCATTATC
-83 4.8 AGTTATCATTATCATTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yjjZ
Ortholog function: putative membrane protein
Escherichia coli str. K-12 substr. MG1655 b4567 -60 4.4 GCAAATGATAAAAATTATC
-37 5.2 GATATTGGTTATCATTATC
Salmonella typhimurium LT2 STM4552 -37 5.2 GATATTGGTTATCATTATC
-31 4.2 GGTTATCATTATCAATTCC
Citrobacter koseri ATCC BAA-895 CKO_03427 2 4.9 GCTATTGGTTATCATTATC
8 4.1 GGTTATCATTATCGGTATC
Enterobacter sp. 638 Ent638_0529 -37 5.2 GATATTGGTTATCATTATC
-31 4 GGTTATCATTATCATATTG
Erwinia amylovora ATCC 49946 EAM_0565 -70 4.3 CAAAGTGATAATGATTAAC
-64 4.3 GATAATGATTAACATATGC
-47 4.9 GCTATTGGTAATCATTATC
-41 4.8 GGTAATCATTATCATTTAT
Yersinia pestis KIM y3754 -4 4.9 GATATTGGTTATGATTATC
2 5.2 GGTTATGATTATCATTATC
Serratia proteamaculans 568 Spro_0646 -39 4.7 GATATTAGTTCTCATTATC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0738 -89 5 GATATTAGTTATCATTATC
-83 4.5 AGTTATCATTATCATTTTT
Proteus mirabilis HI4320 PMI2497 -27 5.3 AATAATGAAAATCATTATC
-21 5.2 GAAAATCATTATCATTAAC
Photorhabdus luminescens subsp. laumondii TTO1 plu4253 -92 5.2 GATATTGGTAATCATTATC
-86 4.7 GGTAATCATTATCATTTGT
Position: -90
Score: 5.1
Sequence: GATAATGTTTCTCATTATC
Locus tag: Pecwa_0946
Pecwa_0946 -90 5.1 GATAATGTTTCTCATTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: CKO_00976
Ortholog function: hypothetical protein
Citrobacter koseri ATCC BAA-895 CKO_00976 -90 4.3 GATAAGGTTTCTCATTATC
Position: -61
Score: 5
Sequence: GATAATGAGAAACATTATC
Locus tag: Pecwa_0947
Pecwa_0947 -61 5 GATAATGAGAAACATTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: iucA2
Ortholog function: aerobactin synthetase (subunit alpha)
Yersinia pestis KIM y3380 -63 4.8 GATAATGATAACCACTATT
Yersinia pestis KIM y3381 -63 4.8 GATAATGATAACCACTATT
Serratia proteamaculans 568 Spro_0922 -63 4.2 GATAACAATAAATATTATT
-45 4.1 TGATATAAGAATCATTCTC
Position: -64
Score: 4.6
Sequence: GCACTTGATAATCATTATC
Position: -58
Score: 5.1
Sequence: GATAATCATTATCGTTTTT
Locus tag: Pecwa_0966
Pecwa_0966 -64 4.6 GCACTTGATAATCATTATC
-58 5.1 GATAATCATTATCGTTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: mntH
Ortholog function: Mn2+/Fe2+ transporter, NRAMP family
Escherichia coli str. K-12 substr. MG1655 b2392 -68 4.7 GAATTTGATAATCATTCTC
-62 4.2 GATAATCATTCTCGTTTGG
Salmonella typhimurium LT2 STM2408 -68 4.5 GCACTTGATAATCATTATC
-62 4.8 GATAATCATTATCAATAAA
Citrobacter koseri ATCC BAA-895 CKO_00404 -50 4.3 GCACTTGATAATCATTCTC
-44 4.5 GATAATCATTCTCAATAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02743 -68 4.3 GAACTTGATAATCATTCGC
-62 4.3 GATAATCATTCGCATTTTG
Enterobacter sp. 638 Ent638_2926 -67 4.8 GATCTTGATAATCATTCTC
-61 4.8 GATAATCATTCTCATTTTG
Yersinia pestis KIM y1500 -78 4 GCGCTTGATAATTATTCTC
-72 4.6 GATAATTATTCTCATTTAA
Serratia proteamaculans 568 Spro_3415 -66 4.3 GCACTTGATAATTATTATC
-60 5.2 GATAATTATTATCATTTAC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0843 -63 4.5 GCACTTGATAATCATTATC
-57 5.2 GATAATCATTATCATTTTT
Edwardsiella tarda EIB202 ETAE_1142 -134 4.5 GCAGTTGATAATCATTATC
Position: -91
Score: 4.9
Sequence: ATAAATGATAATTATTTTT
Position: -88
Score: 4.2
Sequence: AATGATAATTATTTTTATT
Position: -85
Score: 4.7
Sequence: GATAATTATTTTTATTTCC
Locus tag: Pecwa_0997
Pecwa_0997 -91 4.9 ATAAATGATAATTATTTTT
-88 4.2 AATGATAATTATTTTTATT
-85 4.7 GATAATTATTTTTATTTCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yddB
Ortholog function: TonB-dependent receptor
Escherichia coli str. K-12 substr. MG1655 b1495 -4 4.4 GCTAATGATAACCATTCCC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0878 -269 4.4 TAAAACGATTATCATTTGT
-263 4.1 GATTATCATTTGTATTATT
Proteus mirabilis HI4320 PMI3706 -115 4.2 GATATTGCTTATTATTAAT
-75 4.2 AATATTGATTATAAAAATT
Position: -93
Score: 4.2
Sequence: GCGTATAGTTATCATTTAC
Locus tag: Pecwa_1055
Pecwa_1055 -93 4.2 GCGTATAGTTATCATTTAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fhuE
Ortholog function: TonB-dependent siderophore receptor
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0935 -99 4.1 AATAATGCGTATAGTTATC
-93 4.2 GCGTATAGTTATCATTTTC
Position: 11
Score: 4.7
Sequence: ATTTATCGTAATCATTATC
Position: 17
Score: 4.6
Sequence: CGTAATCATTATCGTTCTC
Locus tag: Pecwa_1169
Pecwa_1169 11 4.7 ATTTATCGTAATCATTATC
17 4.6 CGTAATCATTATCGTTCTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fhuC
Ortholog function: iron-hydroxamate transporter ATP-binding subunit
Escherichia coli str. K-12 substr. MG1655 b0151 -57 4.4 CTTTATAATAATCATTCTC
-51 4.5 AATAATCATTCTCGTTTAC
Salmonella typhimurium LT2 STM0192 -56 4.8 GGTTATAATAATAATTATC
-50 4.8 AATAATAATTATCGTTTAC
Citrobacter koseri ATCC BAA-895 CKO_03217 -57 4 GGTCATAAGAATAATTCTC
-51 4.3 AAGAATAATTCTCGTTTAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00166 -56 4 CGTCATAATAATAATTCTC
-50 4.5 AATAATAATTCTCGTTTAC
Enterobacter sp. 638 Ent638_0691 -58 4.3 GGTCATAATAATAATTCTC
-52 4.5 AATAATAATTCTCGTTTAC
Yersinia pestis KIM y0796 -157 4.4 CGTTTTAATAATCATTATC
-151 4.7 AATAATCATTATCGTTACC
Serratia proteamaculans 568 Spro_3978 -60 4.7 GCTTATAATAATTATTATC
-54 4.7 AATAATTATTATCGTTTAC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3312 -123 4.3 CTTTATCGTAATCATTATC
-117 4.5 CGTAATCATTATCGTTCTC
Position: -51
Score: 5
Sequence: ATTAATGATAACTATTATC
Locus tag: Pecwa_1235
Pecwa_1235 -51 5 ATTAATGATAACTATTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: EAM_2941
Ortholog function: Fe3+-hydroxamate ABC transporter, periplasmic component
Erwinia amylovora ATCC 49946 EAM_2941 -41 4.1 GAAACTGATAATAATAATC
-35 5.5 GATAATAATAATCATTTTC
-29 4.1 AATAATCATTTTCTTTTGC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3246 -51 5 AATAATGATAACTATTATC
Position: -97
Score: 4.2
Sequence: TTATACGATAATAATTATC
Position: -91
Score: 4.9
Sequence: GATAATAATTATCAAACTC
Locus tag: Pecwa_1240
Pecwa_1240 -97 4.2 TTATACGATAATAATTATC
-91 4.9 GATAATAATTATCAAACTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yiuA
Ortholog function: siderophore ABC transporter, substrate binding periplasmic protein
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00520 -54 4.1 GAGAATAATTCTCAGAATC
Enterobacter sp. 638 Ent638_0573 -131 4.4 TCAATTGATAAGCATTATC
Erwinia amylovora ATCC 49946 EAM_2096 -48 4.5 AAGAATGATAATATTTATC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3241 -77 4.2 ATATACGATAATAATTATC
-71 4.7 GATAATAATTATCAAACTC
Position: -150
Score: 4.9
Sequence: AATAATAACTATCATTATT
Locus tag: Pecwa_1359
Pecwa_1359 -150 4.9 AATAATAACTATCATTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sfuA
Ortholog function: iron(III) ABC transporter, periplasmic protein
Yersinia pestis KIM y1526 -108 4.8 AACAATGATAATCATTTTT
-102 4.7 GATAATCATTTTTATTACC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3137 -169 4.2 CGAAATAATAATAACTATC
-163 4.7 AATAATAACTATCATTATT
-157 4.4 AACTATCATTATTATTATC
Position: -250
Score: 4.9
Sequence: GAGAATAAATATCATTTTT
Locus tag: Pecwa_1424
Pecwa_1424 -250 4.9 GAGAATAAATATCATTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ECA3096
Ortholog function: ABC iron transporter, periplasmic-binding protein
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3096 -249 4.6 GAGAATAAATATCATTTTT
Position: -35
Score: 5.1
Sequence: GTTAATGAGAATCATTAAC
Locus tag: Pecwa_1518
Pecwa_1518 -35 5.1 GTTAATGAGAATCATTAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: CKO_02654
Ortholog function: hypothetical protein
Citrobacter koseri ATCC BAA-895 CKO_02654 -45 4.2 GCGAATGATAATGATGATC
-39 4.7 GATAATGATGATCATTTAC
Position: -55
Score: 4.3
Sequence: CTAAATAAAAATAATTATC
Position: -49
Score: 4.8
Sequence: AAAAATAATTATCATTTAA
Locus tag: Pecwa_1519
Pecwa_1519 -55 4.3 CTAAATAAAAATAATTATC
-49 4.8 AAAAATAATTATCATTTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hemN1
Ortholog function: coproporphyrinogen III oxidase, iron utilization
Citrobacter koseri ATCC BAA-895 CKO_02656 -45 4.2 GCGAATGATAATGATGATC
-39 4.7 GATAATGATGATCATTTAC
Yersinia pestis KIM y0547 -54 4.1 TCGAATGCTTATGATTATC
-48 4.4 GCTTATGATTATCATTTAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3009 -55 4.2 CCAAATAAAAATAATTATC
-49 4.6 AAAAATAATTATCATTTAA
Edwardsiella tarda EIB202 ETAE_1793 -59 4.4 TCGAATGATAACTATTATC
-53 4.4 GATAACTATTATCATTCAA
Position: -41
Score: 4.9
Sequence: GATAATAAGAATAAATATC
Position: -35
Score: 4.5
Sequence: AAGAATAAATATCATTTGT
Locus tag: Pecwa_1783
Pecwa_1783 -41 4.9 GATAATAAGAATAAATATC
-35 4.5 AAGAATAAATATCATTTGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yijD1
Ortholog function: putative iron permease FTR1
Citrobacter koseri ATCC BAA-895 CKO_02057 -98 5.3 TATAATGATAATAATTATC
-92 5 GATAATAATTATCATTTGT
Yersinia pestis KIM y2370 -47 4.1 GTTAATGTTAATAAATCTC
-41 4.5 GTTAATAAATCTCATTATT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1510 -41 4.7 GATAATAAGAATAAATATC
-35 4.2 AAGAATAAATATCATTTGT
Position: -103
Score: 5.5
Sequence: GATAATGATTTTTATTATC
Locus tag: Pecwa_1814
Pecwa_1814 -103 5.5 GATAATGATTTTTATTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: hasR
Ortholog function: TonB-dependent heme receptor
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1538 -102 5 GGTAATGATTTTTATTATC
-96 4.8 GATTTTTATTATCATTTTC
-90 4.1 TATTATCATTTTCATTAAG
Position: -142
Score: 5.2
Sequence: GATAATAATTATCAATTAC
Locus tag: Pecwa_1816
Pecwa_1816 -142 5.2 GATAATAATTATCAATTAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ECA1540
Ortholog function: ECF sigma-24 factor
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1540 -88 4.1 ATATGTGATAATAATTATC
-82 5 GATAATAATTATCAATTAC
Position: -100
Score: 4.8
Sequence: GCAAATGATTTTAATTTTC
Position: -94
Score: 4.6
Sequence: GATTTTAATTTTCATTTAC
Locus tag: Pecwa_1930
Pecwa_1930 -100 4.8 GCAAATGATTTTAATTTTC
-94 4.6 GATTTTAATTTTCATTTAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: cfrA
Ortholog function: TonB-dependent outer membrane receptor
Citrobacter koseri ATCC BAA-895 CKO_01134 -4 4.8 TGTAATGATAATTATTTTT
2 5 GATAATTATTTTTATTATC
8 4.5 TATTTTTATTATCATTTTC
Yersinia pestis KIM y0850 -103 4.6 AGTAATGATAATTGATATC
-97 4.4 GATAATTGATATCATTTGC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2722 -100 4.6 GCAAATGATTTTAATTTTC
-94 4.3 GATTTTAATTTTCATTTAC
Position: -69
Score: 4.3
Sequence: GCGAATGATAATTAAATTC
Locus tag: Pecwa_2035
Pecwa_2035 -69 4.3 GCGAATGATAATTAAATTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fatB
Ortholog function: iron ABC transporter, substrate-binding protein
Yersinia pestis KIM y4043 -26 4.8 GGTAATAAAAATCATTAGC
-20 4.2 AAAAATCATTAGCATTACT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2564 -86 4.2 GCGAATGATAATTAAATTC
-80 4.1 GATAATTAAATTCTTTATT
Proteus mirabilis HI4320 PMI2957 -121 4.1 GTGAATTAGTATCATTACT
Position: -285
Score: 3.4
Sequence: GTGGATGTTTATTATTCTG
Position: -279
Score: 3.4
Sequence: GTTTATTATTCTGATTGTG
Position: -262
Score: 4.2
Sequence: TGAAATGGGAATCATTTTT
Position: -256
Score: 4.1
Sequence: GGGAATCATTTTTAATACC
Position: -198
Score: 4.8
Sequence: GGTAATAAAAATTATTCTC
Position: -192
Score: 4.4
Sequence: AAAAATTATTCTCAATAAT
Position: -174
Score: 3.6
Sequence: TACAGTGAAATTCATTCTT
Position: -168
Score: 3.8
Sequence: GAAATTCATTCTTAATTGA
Position: -157
Score: 3.9
Sequence: TTAATTGATAATGGATATC
Position: -151
Score: 4.5
Sequence: GATAATGGATATCAATATA
Position: -145
Score: 3.6
Sequence: GGATATCAATATAAATAAT
Position: -135
Score: 4.2
Sequence: ATAAATAATTCTAATTTAT
Position: -75
Score: 3.4
Sequence: TAAAGTGTTTTTTATTTTA
Locus tag: Pecwa_2122
Pecwa_2122 -285 3.4 GTGGATGTTTATTATTCTG
-279 3.4 GTTTATTATTCTGATTGTG
-262 4.2 TGAAATGGGAATCATTTTT
-256 4.1 GGGAATCATTTTTAATACC
-198 4.8 GGTAATAAAAATTATTCTC
-192 4.4 AAAAATTATTCTCAATAAT
-174 3.6 TACAGTGAAATTCATTCTT
-168 3.8 GAAATTCATTCTTAATTGA
-157 3.9 TTAATTGATAATGGATATC
-151 4.5 GATAATGGATATCAATATA
-145 3.6 GGATATCAATATAAATAAT
-135 4.2 ATAAATAATTCTAATTTAT
-75 3.4 TAAAGTGTTTTTTATTTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ftnA
Ortholog function: ferritin
Escherichia coli str. K-12 substr. MG1655 b1905 -127 3.4 GgTAATGcgttTtATTccC
-121 3 GcgttTtATtccCATTcgt
Salmonella typhimurium LT2 STM1935 -100 4 AATAATTAAATTTAATATT
Citrobacter koseri ATCC BAA-895 CKO_01042 -97 4.3 AATAATTAAATTTATTATT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02402 -161 4 ATAAATTAAAAGCATTCTC
-155 3.8 TAAAAGCATTCTCATTTAT
Enterobacter sp. 638 Ent638_2486 -103 3.7 TATTTTAATAAATAATATC
-97 3.6 AATAAATAATATCTTTATT
Erwinia amylovora ATCC 49946 EAM_2940 -131 4.4 TGGAATGATTATCAATTAC
Yersinia pestis KIM y2524 -93 4.4 AATAATGTGAATGATTATC
-87 4.1 GTGAATGATTATCATGATG
Serratia proteamaculans 568 Spro_1942 -174 4.5 GAAAATAGTTATCATAATT
-168 4 AGTTATCATAATTATTTAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2473 -158 4.6 TTAAATGATAATGAATATC
-152 4.8 GATAATGAATATCAATAGC
Proteus mirabilis HI4320 PMI1007 -184 4.7 GTTAATGATAATCAATTCC
-178 4.1 GATAATCAATTCCATTAAT
Photorhabdus luminescens subsp. laumondii TTO1 plu2689 -147 4.4 TTAAATGAGATTCATTTTC
-141 4.4 GAGATTCATTTTCATTTTT
Position: -52
Score: 5.3
Sequence: GATATTGATAATTATTCTC
Locus tag: Pecwa_2211
Pecwa_2211 -52 5.3 GATATTGATAATTATTCTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: sitA
Ortholog function: iron ABC transporter, periplasmic substrate-binding protein
Salmonella typhimurium LT2 STM2861 -99 4.5 GCAAATAAGAATTATTTTC
-93 4.2 AAGAATTATTTTCATTTAT
Citrobacter koseri ATCC BAA-895 CKO_04090 -84 4.5 GTAAATAAGAATTATTTTC
-78 4.2 AAGAATTATTTTCATTTAT
Citrobacter koseri ATCC BAA-895 CKO_00940 -111 4.1 GATAAAGATAATTTTTCTC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03078 -99 4.5 GCAAATAAGAATTATTTTC
-93 4.2 AAGAATTATTTTCATTTAT
Enterobacter sp. 638 Ent638_1111 -98 4.9 TTTAATGATAATTATTTTC
-92 4.5 GATAATTATTTTCATTTAA
Yersinia pestis KIM y1897 -39 5.2 GGTATTGATAATCATTTTC
-33 4.7 GATAATCATTTTCATTTGT
Serratia proteamaculans 568 Spro_2133 -41 5.4 GATATTGATAATCATTTTC
-35 4.6 GATAATCATTTTCATTTGA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2392 -53 5.1 GATATTGATAATTATTCTC
Proteus mirabilis HI4320 PMI1027 -63 4.2 TGAAATGATATTGATAATC
-57 5.5 GATATTGATAATCATTATC
Photorhabdus luminescens subsp. laumondii TTO1 plu2672 -49 5.2 GATATTGATAATCGTTATC
-43 4.5 GATAATCGTTATCATATAC
Position: -278
Score: 4.6
Sequence: AATGATGATAATAGTTATC
Position: -272
Score: 4.8
Sequence: GATAATAGTTATCAGTATC
Locus tag: Pecwa_2613
Pecwa_2613 -278 4.6 AATGATGATAATAGTTATC
-272 4.8 GATAATAGTTATCAGTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: sapA
Ortholog function: ABC peptide transport periplasmic protein
Erwinia amylovora ATCC 49946 EAM_1842 -198 5.1 GTTAATAATAATCATTCTC
-192 5.2 AATAATCATTCTCATTATC
Edwardsiella tarda EIB202 ETAE_1870 -222 4.1 TTGAATGATAATGTTTATC
-216 4.8 GATAATGTTTATCAATATC
Proteus mirabilis HI4320 PMI1378 -131 4.7 GATAATCTTTATCATTAGC
Photorhabdus luminescens subsp. laumondii TTO1 plu2587 -141 4 ACAGATGATAATGGTTATC
-135 4.3 GATAATGGTTATCAATACG
Position: -37
Score: 5.2
Sequence: GATAATGATTATCATTTGA
Locus tag: Pecwa_2753
Pecwa_2753 -37 5.2 GATAATGATTATCATTTGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: EAM_1649
Ortholog function: hypothetical protein
Erwinia amylovora ATCC 49946 EAM_1649 -41 4.7 TAATATGATAATGATTATC
-35 5.5 GATAATGATTATCATTAGC
-29 4 GATTATCATTAGCATAACC
Serratia proteamaculans 568 Spro_2178 24 4.8 AAATATGATAATGATTATC
30 5 GATAATGATTATCATTCAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1858 -43 4.7 TAATATGATAATGATTATC
-37 4.9 GATAATGATTATCATTTCA
Position: -55
Score: 4.9
Sequence: GAAAATGATTCTCATTCAT
Locus tag: Pecwa_2761
Pecwa_2761 -55 4.9 GAAAATGATTCTCATTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hemS
Ortholog function: hemin transport protein
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03088 -133 4 GATAATACCTATCATTACC
Enterobacter sp. 638 Ent638_1740 -50 4.2 TTTGTTGATAATGATTATC
-44 5.1 GATAATGATTATCATTGTT
Erwinia amylovora ATCC 49946 EAM_1642 -65 4.2 TTTGTTGATAATGATTATC
-59 4.8 GATAATGATTATCATTCCA
Yersinia pestis KIM y0542 -48 3.7 GATAATGCTTATCACACTG
-30 4.1 GATAGTCGTTATCATTAAG
Serratia proteamaculans 568 Spro_2168 -68 4 TCACATGATAATGATTCTC
-62 4.6 GATAATGATTCTCACTTTG
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1846 -59 4.7 GAAAATGATTCTCATTCAT
Edwardsiella tarda EIB202 ETAE_1798 -10 4.1 TTATACGATAATGATTATC
-4 5.1 GATAATGATTATCATTAAG
Proteus mirabilis HI4320 PMI1427 -52 5.1 GATAACGATAATGATTATC
-46 5.4 GATAATGATTATCATAATC
-40 4.4 GATTATCATAATCATAACC
Photorhabdus luminescens subsp. laumondii TTO1 plu2633 -54 4.7 TATAACGATAATAATTCTC
-48 4.6 GATAATAATTCTCACTATG
Position: -75
Score: 4.9
Sequence: GAAAATAATAATCACTTGC
Locus tag: Pecwa_2777
Pecwa_2777 -75 4.9 GAAAATAATAATCACTTGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ECA1830
Ortholog function: Cupin 2 domain protein
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1830 -81 4.3 GTAAATGAAAATAATAATC
-75 4.7 GAAAATAATAATCACTTGC
Position: -265
Score: 4.9
Sequence: GAGAATAATAACTATTTTC
Locus tag: Pecwa_2877
Pecwa_2877 -265 4.9 GAGAATAATAACTATTTTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: dps
Ortholog function: DNA protection ferritin-like protein
Salmonella typhimurium LT2 STM0831 -188 4.4 TAAAATGAGAATTATTACC
-136 4 TTTAATCAAAATAAATATT
Citrobacter koseri ATCC BAA-895 CKO_02310 -188 4.5 GTGAATGAGAATTATTAAC
-137 4.3 TTTAATCATTTTCAATATT
Enterobacter sp. 638 Ent638_1299 -118 4.1 TAACATTATTATCACTATT
Position: -96
Score: 4.3
Sequence: AAGAGTGATTATCATATAC
Locus tag: Pecwa_2989
Pecwa_2989 -96 4.3 AAGAGTGATTATCATATAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ETAE_2768
Ortholog function: iron(III) ABC transporter, periplasmic binding protein
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1470 -96 3.9 AAGAGTGATTATCATATAT
Edwardsiella tarda EIB202 ETAE_2768 -82 4.5 AAAAGTAATTATCATTTAC
Position: -172
Score: 5.6
Sequence: GATAATGGTAATCATTATC
Locus tag: Pecwa_3189
Pecwa_3189 -172 5.6 GATAATGGTAATCATTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: plu0739
Ortholog function: TonB-dependent heme/hemoglobin receptor
Photorhabdus luminescens subsp. laumondii TTO1 plu0739 -88 4.6 AATAAAAATAATCATTTTT
Position: -148
Score: 5.1
Sequence: GATAATGACTATCATTAGC
Locus tag: Pecwa_3729
Pecwa_3729 -148 5.1 GATAATGACTATCATTAGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ybdA
Ortholog function: enterobactin exporter EntS, MFS family
Escherichia coli str. K-12 substr. MG1655 b0591 -98 4.8 GATAATGAAATTAATTATC
-92 4.9 GAAATTAATTATCGTTATC
Salmonella typhimurium LT2 STM0593 -98 4.9 GATAATGATAGTAATTATC
-92 4.8 GATAGTAATTATCGTTATC
Citrobacter koseri ATCC BAA-895 CKO_02570 -99 4.9 GATAATGATAGTAATTATC
-93 4.8 GATAGTAATTATCGTTATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00609 -94 4.9 GATAATGATAGTAATTATC
-88 4.8 GATAGTAATTATCGTTATC
Enterobacter sp. 638 Ent638_1123 -94 4.9 GATAATGATAGTAATTATC
-88 4.8 GATAGTAATTATCGTTATC
Serratia proteamaculans 568 Spro_3423 -112 4.4 ATAAATGAGTTTTATTATC
-106 4.4 GAGTTTTATTATCATTATT
Position: -328
Score: 4.2
Sequence: GAGAATTATTTCTATTTGC
Position: 16
Score: 4.3
Sequence: AAGAATCATTATCAAATTT
Locus tag: Pecwa_3736
Pecwa_3736 -328 4.2 GAGAATTATTTCTATTTGC
16 4.3 AAGAATCATTATCAAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: CKO_02589
Ortholog function: TonB-dependent siderophore receptor
Citrobacter koseri ATCC BAA-895 CKO_02589 -114 4.2 GCAAATGGTAATGATTTGC
-108 4.3 GGTAATGATTTGCAATAAC
Enterobacter sp. 638 Ent638_1079 -109 4.3 GGGAATGATTTGCAATATC
Proteus mirabilis HI4320 PMI0363 -103 4.9 TAGAATAATAATAATTATC
-97 5 AATAATAATTATCATTAGT
Position: -132
Score: 4.1
Sequence: TGAAATAAAAATAATTCTT
Position: -129
Score: 3.9
Sequence: AATAAAAATAATTCTTATT
Position: -126
Score: 4.7
Sequence: AAAAATAATTCTTATTTAC
Locus tag: Pecwa_4005
Pecwa_4005 -132 4.1 TGAAATAAAAATAATTCTT
-129 3.9 AATAAAAATAATTCTTATT
-126 4.7 AAAAATAATTCTTATTTAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: bfd
Ortholog function: bacterioferritin-associated ferredoxin
Escherichia coli str. K-12 substr. MG1655 b3337 -51 3.9 tgaAATaAgAActATTtTC
-45 3.9 aAgAActATttTCATTtat
Salmonella typhimurium LT2 STM3444 -55 4.6 TGTAATCATAACCATTCTC
-49 4.3 CATAACCATTCTCATTTAC
Citrobacter koseri ATCC BAA-895 CKO_04744 -55 4.3 TGTAATCATAACTATTCTC
-49 4.2 CATAACTATTCTCATTTAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03723 -55 4.6 TGTAATCATAACCATTCTC
-49 3.9 cATAAccATtcTCATTtaa
Enterobacter sp. 638 Ent638_3755 -55 4.7 TGTAATCATAATTATTCTC
-49 4.2 CATAATTATTCTCACTTAC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4034 -132 3.9 tgaAATaAaAATaATTcTt
-126 4.4 AAAAATAATTCTTATTTAC
Proteus mirabilis HI4320 PMI3252 -57 4.2 TGAAATAACAATGATTATC
-51 4.8 AACAATGATTATCATTTAC
Photorhabdus luminescens subsp. laumondii TTO1 plu4729 -59 4.4 TGAAATGAGACTCATTATT
-53 3.6 GAgAcTcATtATtATTtaa
Position: -105
Score: 5.1
Sequence: AATAATCATTTTCAATATC
Locus tag: Pecwa_4442
Pecwa_4442 -105 5.1 AATAATCATTTTCAATATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: sodA
Ortholog function: manganese/iron superoxide dismutase
Escherichia coli str. K-12 substr. MG1655 b3908 -99 4.7 GGCATTGATAATCATTTTC
-93 5 GATAATCATTTTCAATATC
Salmonella typhimurium LT2 STM4055 -99 4.7 GGCATTGATAATCATTTTC
-93 5 GATAATCATTTTCAATATC
Citrobacter koseri ATCC BAA-895 CKO_03093 -88 4.3 GGCATTGATAAGCATTTTC
-82 4.4 GATAAGCATTTTCAATATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04217 -88 4.3 GGCATTGATAAGCATTTTC
-82 4 GATAAGCATTTTCAATACC
Enterobacter sp. 638 Ent638_4063 -100 4.7 GGCATTGATAATCATTTTC
-94 5 GATAATCATTTTCAATATC
Yersinia pestis KIM y4080 -104 4.4 AGGTTTGATAATCATTTTC
-98 5 GATAATCATTTTCAATATC
Serratia proteamaculans 568 Spro_0081 -105 4.7 GGCATTGATAATCATTTTC
-99 5 GATAATCATTTTCAATATC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0092 -105 4.9 AATAATCATTTTCAATATC
Proteus mirabilis HI4320 PMI3036 -95 4.6 GGATATGATAATGATTTTC
-89 5.2 GATAATGATTTTCATTAAC
Photorhabdus luminescens subsp. laumondii TTO1 plu0075 -102 4.3 GGTATTGATAAGCATTTCC
Position: -108
Score: 4.4
Sequence: CAGAGTGATAATGATTATC
Position: -102
Score: 5.1
Sequence: GATAATGATTATCGTTAGT
Locus tag: Pecwa_4467
Pecwa_4467 -108 4.4 CAGAGTGATAATGATTATC
-102 5.1 GATAATGATTATCGTTAGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: CKO_00978
Ortholog function: FAD-binding 9 siderophore-interacting domain protein
Citrobacter koseri ATCC BAA-895 CKO_00978 -90 4.3 GATAAGGTTTCTCATTATC
Serratia proteamaculans 568 Spro_0924 -93 4.3 AATAATATTTATTGTTATC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0065 -106 4.3 AATGGTGATAATGATTATC
-100 4.9 GATAATGATTATCGTTAGT
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