Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Crp regulog to Candidatus Blochmannia pennsylvanicus str. BPEN

Reference regulog properties
Source regulog: Crp - Enterobacteriales
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator (repressor)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Candidatus Blochmannia pennsylvanicus str. BPEN
Orthologous TF(s) No orthologous TFs found
Regulated genes 50
Built upon 2301 sites [see more]
Predicted regulatory interactions in Candidatus Blochmannia pennsylvanicus str. BPEN
Locus tag Position Score Sequence
Position: -287
Score: 3.6
Sequence: TTTCGTTCTCATTAACACAATT
Position: -209
Score: 3.6
Sequence: ATATATTATTCAAATTATATTA
Position: -7
Score: 4
Sequence: TTTTATTATGAGTTTCATATTA
Locus tag: BPEN_021
BPEN_021 -287 3.6 TTTCGTTCTCATTAACACAATT
-209 3.6 ATATATTATTCAAATTATATTA
-7 4 TTTTATTATGAGTTTCATATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: sodA
Ortholog function: Manganese superoxide dismutase (EC 1.15.1.1)
Escherichia coli str. K-12 substr. MG1655 b3908 -161 3.8 GTGGGTGATTTGCTTCACATCT
Citrobacter koseri ATCC BAA-895 CKO_03093 -150 4.4 ACGGGTGATTTGGCTCACATAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04217 -150 4 TTAGTTGTTCTACATCACAAAA
Enterobacter sp. 638 Ent638_4063 -160 3.6 CCGCGTGAGCAGACTCACAATT
Proteus mirabilis HI4320 PMI3036 -292 3.7 TTTTGCGCATAAGATCACGAAA
Photorhabdus luminescens subsp. laumondii TTO1 plu0075 -297 3.7 TTTTGCGCGGAAGATCACGCAA
Position: -63
Score: 3.7
Sequence: TTTTATAATTTTTATAAAAAAA
Position: -21
Score: 3.9
Sequence: TTTAATAACACACATCACATTA
Locus tag: BPEN_153
BPEN_153 -63 3.7 TTTTATAATTTTTATAAAAAAA
-21 3.9 TTTAATAACACACATCACATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: coaE
Ortholog function: dephospho-CoA kinase
Erwinia amylovora ATCC 49946 EAM_0727 -75 4.4 TCGTGTGATCTGCGCCACATTA
Yersinia pestis KIM y0757 -259 3.8 AAATGTGATCGGGCGTAAAACA
Serratia proteamaculans 568 Spro_0774 -158 3.8 CAGTGTGACCGCCCGCTCATTT
Edwardsiella tarda EIB202 ETAE_0650 -272 4 AAATGTGATCATACAAACGATT
Proteus mirabilis HI4320 PMI2052 -80 3.8 TCTTGTGATAAAAATCAGTTTA
Position: -192
Score: 3.2
Sequence: TAGATTTAAATATTTCACTTTT
Position: -183
Score: 3.2
Sequence: ATATTTCACTTTTTTAAAAATT
Position: -21
Score: 3.3
Sequence: TAAAATGAAGGGCACCATATTA
Locus tag: BPEN_156
BPEN_156 -192 3.2 TAGATTTAAATATTTCACTTTT
-183 3.2 ATATTTCACTTTTTTAAAAATT
-21 3.3 TAAAATGAAGGGCACCATATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: lpdA
Ortholog function: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4)
Escherichia coli str. K-12 substr. MG1655 b0116 -224 3.3 AATTGTTAACAATTTTGTAAAA
Salmonella typhimurium LT2 STM0154 -153 3.5 GTTTGTGAGGTTATTAGCGAAA
Citrobacter koseri ATCC BAA-895 CKO_03256 -95 3.3 AATTGTTAACAATTTTGTAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00120 -105 3.3 AATTGTTAACAATTTTGTAAAA
Yersinia pestis KIM y0769 -253 3.3 ATTGGTGATCTTGTTATTACTG
Serratia proteamaculans 568 Spro_4009 -246 3.6 TATGGTGATGTAATGAAAAAAG
Proteus mirabilis HI4320 PMI2044 -133 3.4 GGTTGTGAGATCTGTCATGTTA
Photorhabdus luminescens subsp. laumondii TTO1 plu3621 -131 3.9 TGTTGCGAGTTCTGTCACGTTA
Position: 5
Score: 3.2
Sequence: AATTGAAATTAATATACCAAAT
Locus tag: BPEN_157
BPEN_157 5 3.2 AATTGAAATTAATATACCAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: aceF
Ortholog function: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
Escherichia coli str. K-12 substr. MG1655 b0115 -156 3.7 AAACGTTATATATGTCAAGTTG
-131 3.8 AAATGTGCACAGTTTCATGATT
Salmonella typhimurium LT2 STM0153 -157 3.5 AAACATGATTTCTGTAAAATTG
-120 3.2 TTTACTGATTTCAATCAAAACC
-79 3 CTTATTAAGCTTTCTCACGAAA
-54 3.4 TAATGGGACAGGTTCCAGATAA
Citrobacter koseri ATCC BAA-895 CKO_03258 -180 3.2 ATTTGTGCATAGTTACATCTTT
-157 3.1 AAACGTTATTTCTGTAATCTTG
-148 3.3 TTCTGTAATCTTGTTAAAATGT
-120 3.2 TTTACTGATTTCAATCAAAACC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00119 -155 3.2 AAATGTTATTTCTGTAAGGTTG
-118 3.2 TTTACTGATTTCAATCAAAACC
Enterobacter sp. 638 Ent638_0661 -120 3.2 TTTACTGATTTCAATCAAAACC
-77 3.1 TATTGTATTTTCTGGCGAAAAT
-68 3 TTTAGCGATACGAATATGAAAT
Erwinia amylovora ATCC 49946 EAM_0748 -198 3.3 TAAAGCGATCGGATTTAACAAT
Yersinia pestis KIM y0768 -151 4.2 AAATGTGCTGGGTTTCATGATT
-139 3.3 TTTCATGATTTCGGTCAAGGTC
-74 3.4 TTTTGAAATTGGTATTACCAAT
Serratia proteamaculans 568 Spro_4010 -132 3.1 AAATGTGCGGGTAACCTGATTT
-56 3.4 TTTTGAAATTGGTATTACCAAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3788 -120 3.7 ATTGGTGATTTAGCTCAAGGTC
-55 3.4 TTTTGAAATTGGTATTACCAAT
Edwardsiella tarda EIB202 ETAE_0660 -143 3.2 TTTCATGATTTACATCAATAGT
Proteus mirabilis HI4320 PMI2045 -218 3.1 TGTTTTTAATCTTTTCTAATAA
-199 4.4 TAATGCGATCTAGTTATCAAAT
-181 4.2 AAATTTGATGAATTTATCAAAT
-158 3 ATTTGTTAAAATTTGCAGGTTT
-138 3.9 TTTTATGATTTCGCTCAACAAC
-95 3.1 CTTTGTTACTTTATTATCCATT
-89 3.1 TACTTTATTATCCATTACATTA
Position: -346
Score: 3.1
Sequence: ACATTTTAATGCGATCACTTTA
Position: -340
Score: 3.6
Sequence: TAATGCGATCACTTTAATCAAT
Position: -152
Score: 3.2
Sequence: TATTTTAATTTGTTAAAAACAA
Position: -61
Score: 3.1
Sequence: AATATTTATAAAATCAACATAA
Position: 15
Score: 3.3
Sequence: TCTGATGATGTAGATCCCATAG
Locus tag: BPEN_158
BPEN_158 -346 3.1 ACATTTTAATGCGATCACTTTA
-340 3.6 TAATGCGATCACTTTAATCAAT
-152 3.2 TATTTTAATTTGTTAAAAACAA
-61 3.1 AATATTTATAAAATCAACATAA
15 3.3 TCTGATGATGTAGATCCCATAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: aceE
Ortholog function: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
Escherichia coli str. K-12 substr. MG1655 b0114 -156 3.7 AAACGTTATATATGTCAAGTTG
-131 3.8 AAATGTGCACAGTTTCATGATT
Salmonella typhimurium LT2 STM0152 -157 3.5 AAACATGATTTCTGTAAAATTG
-120 3.2 TTTACTGATTTCAATCAAAACC
-79 3 CTTATTAAGCTTTCTCACGAAA
-54 3.4 TAATGGGACAGGTTCCAGATAA
Citrobacter koseri ATCC BAA-895 CKO_03259 -180 3.2 ATTTGTGCATAGTTACATCTTT
-157 3.1 AAACGTTATTTCTGTAATCTTG
-148 3.3 TTCTGTAATCTTGTTAAAATGT
-120 3.2 TTTACTGATTTCAATCAAAACC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00118 -155 3.2 AAATGTTATTTCTGTAAGGTTG
-118 3.2 TTTACTGATTTCAATCAAAACC
Enterobacter sp. 638 Ent638_0660 -120 3.2 TTTACTGATTTCAATCAAAACC
-77 3.1 TATTGTATTTTCTGGCGAAAAT
-68 3 TTTAGCGATACGAATATGAAAT
Erwinia amylovora ATCC 49946 EAM_0747 -198 3.3 TAAAGCGATCGGATTTAACAAT
Yersinia pestis KIM y0767 -151 4.2 AAATGTGCTGGGTTTCATGATT
-139 3.3 TTTCATGATTTCGGTCAAGGTC
-74 3.4 TTTTGAAATTGGTATTACCAAT
Serratia proteamaculans 568 Spro_4011 -132 3.1 AAATGTGCGGGTAACCTGATTT
-56 3.4 TTTTGAAATTGGTATTACCAAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3789 -120 3.7 ATTGGTGATTTAGCTCAAGGTC
-55 3.4 TTTTGAAATTGGTATTACCAAT
Edwardsiella tarda EIB202 ETAE_0659 -143 3.2 TTTCATGATTTACATCAATAGT
Proteus mirabilis HI4320 PMI2046 -218 3.1 TGTTTTTAATCTTTTCTAATAA
-199 4.4 TAATGCGATCTAGTTATCAAAT
-181 4.2 AAATTTGATGAATTTATCAAAT
-158 3 ATTTGTTAAAATTTGCAGGTTT
-138 3.9 TTTTATGATTTCGCTCAACAAC
-95 3.1 CTTTGTTACTTTATTATCCATT
-89 3.1 TACTTTATTATCCATTACATTA
Position: -210
Score: 4.1
Sequence: TATTGTTAAAAGAATCTCATAT
Position: -39
Score: 3.6
Sequence: ATTTATTATATAATACATAATT
Locus tag: BPEN_183
BPEN_183 -210 4.1 TATTGTTAAAAGAATCTCATAT
-39 3.6 ATTTATTATATAATACATAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: aroF
Ortholog function: phospho-2-dehydro-3-deoxyheptonate aldolase
Salmonella typhimurium LT2 STM2670 -71 3.9 TTTTGTGGTATGGTTTAAACAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02923 -159 3.8 TATTGTTATACGCATCGCGCCA
Edwardsiella tarda EIB202 ETAE_2837 -117 3.8 ATGTACGATATTGTTTACATAT
Proteus mirabilis HI4320 PMI0387 -214 4.5 TTATTTTATCTTAGTCACATTT
Photorhabdus luminescens subsp. laumondii TTO1 plu1262 -262 3.6 TGTTTTGATATTGATTTTATTT
Position: -39
Score: 3.8
Sequence: TTTTGGGAAATGTTGCAAATAT
Position: -21
Score: 3.8
Sequence: ATATATGAGGATAATAAAATAA
Locus tag: BPEN_251
BPEN_251 -39 3.8 TTTTGGGAAATGTTGCAAATAT
-21 3.8 ATATATGAGGATAATAAAATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cyoB
Ortholog function: cytochrome o ubiquinol oxidase subunit I
Escherichia coli str. K-12 substr. MG1655 b0431 -245 3.8 ATAATTGTTTTATTTCACATTG
Erwinia amylovora ATCC 49946 EAM_0984 -134 4 AGTTGTGACAGCGTTTGCAAAA
Yersinia pestis KIM y1020 -137 4.5 ATCTGTGACCCCCTTAACATAA
Serratia proteamaculans 568 Spro_1089 -135 4.2 ATCTGTGACCCCCTTAACAGAA
Proteus mirabilis HI4320 PMI0107 -194 3.6 AAATTATAGTTAATTCACAATA
-147 3.6 TTAATTACTTGTGATCACATTA
-141 4.3 ACTTGTGATCACATTAACACAA
Position: -318
Score: 3.5
Sequence: ATAAGTGAATAAACGCATAAAA
Position: -227
Score: 3.7
Sequence: AATTTTGATCATAATCTATTAA
Position: -172
Score: 3.2
Sequence: ATATATAAATTTAATAATATTT
Locus tag: BPEN_259
BPEN_259 -318 3.5 ATAAGTGAATAAACGCATAAAA
-227 3.7 AATTTTGATCATAATCTATTAA
-172 3.2 ATATATAAATTTAATAATATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: metK
Ortholog function: S-adenosylmethionine synthetase (EC 2.5.1.6)
Escherichia coli str. K-12 substr. MG1655 b2942 -200 3.6 GAATGAGACACGATTCAAAAAA
Salmonella typhimurium LT2 STM3090 -200 3.9 CATTGCGACGGCCTTCAAAAAA
Citrobacter koseri ATCC BAA-895 CKO_04317 -199 3.5 CAACGAGAGTTGATTCAAAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03375 -199 4.3 AAATGCGACCGCCATCAAAAAA
Enterobacter sp. 638 Ent638_3346 -199 4.4 TAATGCGAGCGATATCAAAAAA
Proteus mirabilis HI4320 PMI2095 -275 3.5 CACTGTGATTCAGTTTTCACAG
Photorhabdus luminescens subsp. laumondii TTO1 plu3683 -205 3.3 GTTTATACTCGCAATCACATAA
Position: -86
Score: 3.6
Sequence: AATAGTGATATATAGATAAATA
Position: -4
Score: 4
Sequence: TATCATGACTATGATCAAAATA
Locus tag: BPEN_261
BPEN_261 -86 3.6 AATAGTGATATATAGATAAATA
-4 4 TATCATGACTATGATCAAAATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: pgk
Ortholog function: phosphoglycerate kinase
Escherichia coli str. K-12 substr. MG1655 b2926 -213 4.7 AAGTGTGATGTGAGTCAGATAA
Salmonella typhimurium LT2 STM3069 -213 5 AAATGTGATGCAGGTCAGATAA
Citrobacter koseri ATCC BAA-895 CKO_04296 -213 4.8 AAGTGTGATGCAGGTCAGATAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03355 -213 4.8 AAATGTGATGTGAGTCATATAG
Enterobacter sp. 638 Ent638_3339 -215 4.5 AAATGTGACGCAAGTCATATAG
Erwinia amylovora ATCC 49946 EAM_2812 -208 4.1 TTTTGTGACGCAGATCGAAAGT
Yersinia pestis KIM y3308 -216 3.7 AATTGTGCCCTTTTTCAGGGAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3912 -194 4.1 TTTTATGACGCAGGTCACTCTT
Edwardsiella tarda EIB202 ETAE_2957 -233 4.9 AATTGTGATGCAATGCACGTTT
Proteus mirabilis HI4320 PMI0242 -253 4.4 AAATGTTAACAAGAGCACATTT
Position: -102
Score: 3.7
Sequence: TTTTTTGATCTATATAAAACGA
Locus tag: BPEN_263
BPEN_263 -102 3.7 TTTTTTGATCTATATAAAACGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: rpiA
Ortholog function: Ribose 5-phosphate isomerase A (EC 5.3.1.6)
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03349 -82 3.9 TTGTGTGATCTGCATCGCAGGG
Enterobacter sp. 638 Ent638_3333 -47 3.8 TAATGTGACACCGGTCACAGGG
Yersinia pestis KIM y3302 -114 4.2 AACTGTGATCTCGCTAGAATTA
Edwardsiella tarda EIB202 ETAE_2950 -276 4 TTTTGTTATGTATAAAACGTTA
Proteus mirabilis HI4320 PMI2032 -96 3.8 TAAAATGTTGTGTCTCAAATTT
Position: -116
Score: 3.7
Sequence: TGTTGTAAGATTTTTCACGAAC
Position: -88
Score: 3.6
Sequence: ATATTTGAAGTATTTGATATTT
Locus tag: BPEN_390
BPEN_390 -116 3.7 TGTTGTAAGATTTTTCACGAAC
-88 3.6 ATATTTGAAGTATTTGATATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: msbA
Ortholog function: fused lipid transporter subunits of ABC superfamily: membrane component/ATP-binding component
Salmonella typhimurium LT2 STM0984 -120 4.1 TTTTTTGCTGCGTCTTACATTT
Proteus mirabilis HI4320 PMI0718 -212 3.6 TTACGTGATCTTTCTCTATTTG
-152 3.6 TTTTTAGAACAACTTCGCAAAA
Photorhabdus luminescens subsp. laumondii TTO1 plu1630 -230 3.7 ATTTGATATCAGTATCGCAATG
-152 4.4 ATTTGCGAAGCTGTTCGCATAT
Position: -131
Score: 3.2
Sequence: TTATATTCAATCGATTACATAT
Position: -96
Score: 3.3
Sequence: ATAGTTAAATACAATCACATAT
Position: -55
Score: 3.2
Sequence: TTATGGGCTATTAATTTCAAAA
Position: -4
Score: 3.3
Sequence: AAAAGTGAATGATTTTATCAAA
Locus tag: BPEN_393
BPEN_393 -131 3.2 TTATATTCAATCGATTACATAT
-96 3.3 ATAGTTAAATACAATCACATAT
-55 3.2 TTATGGGCTATTAATTTCAAAA
-4 3.3 AAAAGTGAATGATTTTATCAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: aroA
Ortholog function: 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)
Escherichia coli str. K-12 substr. MG1655 b0908 -155 4.8 TTGTGTGATGCAAGCCACATTT
Salmonella typhimurium LT2 STM0978 -142 4.2 TTGTGTGACGCATGCCGCATTT
Citrobacter koseri ATCC BAA-895 CKO_02164 -171 4.6 TTGTGTGACGTAGCGCGCATTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00936 -145 3.7 TTGTGTGACGGCGGCCGCGTTT
Enterobacter sp. 638 Ent638_1428 -119 4.4 TTGTGTGACGGTGGACACATTT
Yersinia pestis KIM y2783 -39 3.3 TATAACGATGGCAATCTCAGTA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2593 -78 3.5 AAGTATGACGGGTATAAAAATG
Edwardsiella tarda EIB202 ETAE_2177 -104 3.8 TATAGTGACAGCGCTCAATAAA
Position: -302
Score: 3.6
Sequence: AATTGTTATTTATTTTATTAAA
Position: -214
Score: 3.5
Sequence: ATTCATTATTTTGATAAAAAAT
Position: -193
Score: 3.5
Sequence: TTTTGTTTTGTTTATTGCACTT
Position: -137
Score: 3.3
Sequence: TTTTGTTATATTAAATGAAAAT
Locus tag: BPEN_394
BPEN_394 -302 3.6 AATTGTTATTTATTTTATTAAA
-214 3.5 ATTCATTATTTTGATAAAAAAT
-193 3.5 TTTTGTTTTGTTTATTGCACTT
-137 3.3 TTTTGTTATATTAAATGAAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: serC
Ortholog function: Phosphoserine aminotransferase (EC 2.6.1.52)
Escherichia coli str. K-12 substr. MG1655 b0907 -155 4.8 TTGTGTGATGCAAGCCACATTT
Salmonella typhimurium LT2 STM0977 -142 4.2 TTGTGTGACGCATGCCGCATTT
Citrobacter koseri ATCC BAA-895 CKO_02165 -171 4.6 TTGTGTGACGTAGCGCGCATTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00935 -145 3.7 TTGTGTGACGGCGGCCGCGTTT
Enterobacter sp. 638 Ent638_1427 -119 4.4 TTGTGTGACGGTGGACACATTT
Yersinia pestis KIM y2784 -39 3.3 TATAACGATGGCAATCTCAGTA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2594 -78 3.5 AAGTATGACGGGTATAAAAATG
Proteus mirabilis HI4320 PMI0711 -119 3.5 TATTTTTGTGTGCTACACATAA
Position: -253
Score: 4.7
Sequence: AAATATTATTTAAATCACATTA
Locus tag: BPEN_424
BPEN_424 -253 4.7 AAATATTATTTAAATCACATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ybiS
Ortholog function: hypothetical protein
Escherichia coli str. K-12 substr. MG1655 b0819 -116 4.7 AAATGTGATTTCGTACACATCT
Salmonella typhimurium LT2 STM0837 -116 4.4 AAACGTGATTTCGTACACATCT
Citrobacter koseri ATCC BAA-895 CKO_02299 -202 3.8 ATATGTGACAAACCGCTTATTA
-116 4.7 AAATGTGATTTCGTACACATCT
Enterobacter sp. 638 Ent638_1310 -119 4.7 AAATGTGATTTCGTACACATCT
Position: -53
Score: 3.9
Sequence: ATATATGATGAATATTAAAGAT
Locus tag: BPEN_464
BPEN_464 -53 3.9 ATATATGATGAATATTAAAGAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: zwf
Ortholog function: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
Escherichia coli str. K-12 substr. MG1655 b1852 -208 3.9 TAACATGATCAGTGTCAGATTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02367 -225 3.8 TTACATGATCAGGGTCGTATTT
Yersinia pestis KIM y2244 -231 4.1 TAATATGACCTGTGTCTAATTT
Proteus mirabilis HI4320 PMI1157 -225 3.7 AAGTATGACCTGTGTCTAACTT
Photorhabdus luminescens subsp. laumondii TTO1 plu2122 -234 4.2 TAATTTAATGTTTTTCATAAAA
Position: -37
Score: 4.3
Sequence: TGATGTTATAGATTTTACATTT
Locus tag: BPEN_474
BPEN_474 -37 4.3 TGATGTTATAGATTTTACATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: srlQ
Ortholog function: Glucitol operon SrlQ protein
Escherichia coli str. K-12 substr. MG1655 b2708 -93 4.4 TTTTGCGATCAAAATAACACTT
Salmonella typhimurium LT2 STM2838.S -93 4.3 TTTTGCGATCACAATAACACTT
Citrobacter koseri ATCC BAA-895 CKO_04062 -93 4.3 TTTTGAGATCAAAATAACACTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03043 -92 4.6 TTTTGCGATCCATTTAACACTT
Serratia proteamaculans 568 Spro_3575 -110 4.9 AATTGTGATCTATTTAAAACAA
Position: -328
Score: 3.8
Sequence: ATTTATTATGCATTTTAAATTT
Position: -280
Score: 3.8
Sequence: TATTATGATGTATAAAATACAT
Locus tag: BPEN_485
BPEN_485 -328 3.8 ATTTATTATGCATTTTAAATTT
-280 3.8 TATTATGATGTATAAAATACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gnd
Ortholog function: hypothetical protein
Enterobacter sp. 638 Ent638_2642 -116 4 CAGTGTGACATAGATCAGCAAA
Yersinia pestis KIM y2629 -78 3.8 AGTTGTGCTATCTATCGCACCA
-76 3.6 TTGTGCTATCTATCGCACCAAT
Serratia proteamaculans 568 Spro_1608 -297 3.7 ATGCTTGAAGTGGCTCTCACTT
-72 4.2 ACATGTGTGCCACATCACAAAA
Proteus mirabilis HI4320 PMI0655 -71 4.7 CTATGTGATCAGGTTAACAAAT
Photorhabdus luminescens subsp. laumondii TTO1 plu1560 -74 4.4 ACATGTGATCACATTAACAAAT
Position: -114
Score: 3.4
Sequence: ATTTTTAATATTAATCAATGTA
Locus tag: BPEN_487
BPEN_487 -114 3.4 ATTTTTAATATTAATCAATGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: folE
Ortholog function: GTP cyclohydrolase I
Escherichia coli str. K-12 substr. MG1655 b2153 -101 3.8 TTATGTGCGCCGCCTCACGCAC
Salmonella typhimurium LT2 STM2193 -101 4 TTATGTGCGCTACCTCACGCAC
Citrobacter koseri ATCC BAA-895 CKO_00638 -98 3.8 TTATGTGCGCCGCCTCACGCAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02591 -84 3.5 TTCTGTGCGCCACCTCACGCAC
Enterobacter sp. 638 Ent638_2753 -84 3.9 TTATGTGCGCCACCTCACGCAC
Serratia proteamaculans 568 Spro_1560 -121 4.3 AATCTTGACCGGGTTCACGTTA
Proteus mirabilis HI4320 PMI0639 -86 4.9 TAATGTGATTCAGCTCATCTAA
Position: -265
Score: 3.4
Sequence: TTAATTTATATATATTAAAAAT
Locus tag: BPEN_493
BPEN_493 -265 3.4 TTAATTTATATATATTAAAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ubiG
Ortholog function: 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64)
Escherichia coli str. K-12 substr. MG1655 b2232 -236 3.8 AACAATGACCGACATCGCATAA
Citrobacter koseri ATCC BAA-895 CKO_00542 -249 3.8 AACAATGACCGACATCGCATAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02641 -236 3.8 AACAATGACCGACATCGCATAA
Proteus mirabilis HI4320 PMI1733 -214 3.5 TGGTGTGATTTCTCTGGCAATG
-89 3.4 TTTCGCGATTCTCTTCGATTTA
Position: -289
Score: 3.6
Sequence: ATATTTTATTTATTGCAGAATT
Position: -159
Score: 3.6
Sequence: GAATGTGATATACATGAAAAAG
Position: -120
Score: 3.5
Sequence: ATTATTTATACGTATAACAGTA
Locus tag: BPEN_526
BPEN_526 -289 3.6 ATATTTTATTTATTGCAGAATT
-159 3.6 GAATGTGATATACATGAAAAAG
-120 3.5 ATTATTTATACGTATAACAGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ptsH
Ortholog function: PTS system phosphocarrier protein
Escherichia coli str. K-12 substr. MG1655 b2415 -209 3.9 TTTTATGATTTGGTTCAATTCT
Salmonella typhimurium LT2 STM2431 -209 4.4 TTTTATGATTTGGTTCAAATCT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02762 -206 4 TTTTATGATTTGGTTCAAGTCT
Enterobacter sp. 638 Ent638_2943 -271 4.4 TTTTGTGGTCCACTTCAAACTT
-144 4 TTTTATGATTTGGTTCAAGTCT
Serratia proteamaculans 568 Spro_3448 -149 3.6 TTTTTTGATCTGAAGTGCCAAA
Proteus mirabilis HI4320 PMI1828 -275 4.4 TTTTGTGGTAGAGATCAAACTT
-115 3.6 TAACGTAACATGGCTTATATTA
Position: -191
Score: 3.9
Sequence: CTTTGTAATAATAATTACATTT
Locus tag: BPEN_596
BPEN_596 -191 3.9 CTTTGTAATAATAATTACATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yigL
Ortholog function: Hydrolase (HAD superfamily)
Citrobacter koseri ATCC BAA-895 CKO_00167 -60 3.8 TATTGTGTCAGGCATCATAAAG
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04322 -56 3.8 TTGTGTGATACACGGTAAAAAA
Enterobacter sp. 638 Ent638_3970 -56 4.3 TTTTGTGATGCGTCACGAAAAA
Yersinia pestis KIM y0401 -144 4.8 AGTTGTGCTATGGCTCACAAAA
Serratia proteamaculans 568 Spro_0197 -88 3.8 TTGTAAGAATTGAATCACAATA
-53 4.2 TCTTGTGCCAGAGGTCACATTT
Edwardsiella tarda EIB202 ETAE_3342 -217 3.9 CGGTGTGATAATCCTCAAACTT
Position: -218
Score: 3.9
Sequence: AAATGTTATTTTTAAAAAATTA
Locus tag: BPEN_643
BPEN_643 -218 3.9 AAATGTTATTTTTAAAAAATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glnA
Ortholog function: glutamine synthetase
Escherichia coli str. K-12 substr. MG1655 b3870 -269 4.2 CTTTGTGATCGCTTTCACGGAG
Salmonella typhimurium LT2 STM4007 -272 4.2 CTTTGTGATCGCTTTCACGGAG
-114 3.8 CAATGTGAAAGTTGGCACAGAT
Citrobacter koseri ATCC BAA-895 CKO_03140 -250 4.2 CTTTGTGATCGCTTTCACGGAG
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04178 -299 3.9 CTTTGTGACCGCTTTCACGGAG
Serratia proteamaculans 568 Spro_4881 -267 4 GTATGTGATCCCTTTCACGGTG
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0029 -265 4.2 CTTTGTGATCCCTTTCACGGTG
Edwardsiella tarda EIB202 ETAE_3493 -267 4.2 GTTTGTGATCCTATTCACGATG
Proteus mirabilis HI4320 PMI2882 -270 4.7 AATTGTGATCCTTTTCACGCCT
-215 3.8 AATTGTGCAACTATTCAGACTT
-181 3.9 ATTTGTGCAATAATTAAAAAAT
Position: -318
Score: 3.9
Sequence: TTTTTTGATGTTTATCTGAGAT
Position: -29
Score: 3.7
Sequence: TTTTGTGATAGAGCATAAGAAA
Locus tag: BPEN_656
BPEN_656 -318 3.9 TTTTTTGATGTTTATCTGAGAT
-29 3.7 TTTTGTGATAGAGCATAAGAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: pgi
Ortholog function: Glucose-6-phosphate isomerase (EC 5.3.1.9)
Salmonella typhimurium LT2 STM4221 -61 3.7 TTCTGTGACTGGCGTTACAATC
Citrobacter koseri ATCC BAA-895 CKO_03893 -61 4.1 TTTTGTGACTGGCGTTACAATC
Serratia proteamaculans 568 Spro_4477 -80 3.7 AAAAGAGATCATAATCACAGTC
Proteus mirabilis HI4320 PMI2754 -245 3.7 CAGTGAGATGTTAAACACAGTT
Photorhabdus luminescens subsp. laumondii TTO1 plu4379 -205 3.8 TGACGCGATGAGAATCATAAAA
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