Propagation of Fur regulog to Dickeya zeae Ech1591
| Source regulog: | Fur - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | FUR |
| Regulation mode: | repressor (activator) |
| Biological process: | Iron homeostasis |
| Effector: | Iron ion, (Fe2+) |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Dickeya zeae Ech1591 |
| Orthologous TF(s) | Dd1591_2939 |
| Regulated genes | 24 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -62
Score: 4 Sequence: TGAAATAAAAACCATTCTT
Position: -56
Score: 4.3 Sequence: AAAAACCATTCTTATTTAC
Locus tag: Dd1591_0320
|
||||
| Dd1591_0320 | -62 | 4 | TGAAATAAAAACCATTCTT | |
| -56 | 4.3 | AAAAACCATTCTTATTTAC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: bfd | ||||
| Ortholog function: bacterioferritin-associated ferredoxin | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3337 | -51 | 3.9 | tgaAATaAgAActATTtTC |
| -45 | 3.9 | aAgAActATttTCATTtat | ||
| Salmonella typhimurium LT2 | STM3444 | -55 | 4.6 | TGTAATCATAACCATTCTC |
| -49 | 4.3 | CATAACCATTCTCATTTAC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_04744 | -55 | 4.3 | TGTAATCATAACTATTCTC |
| -49 | 4.2 | CATAACTATTCTCATTTAC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03723 | -55 | 4.6 | TGTAATCATAACCATTCTC |
| -49 | 3.9 | cATAAccATtcTCATTtaa | ||
| Enterobacter sp. 638 | Ent638_3755 | -55 | 4.7 | TGTAATCATAATTATTCTC |
| -49 | 4.2 | CATAATTATTCTCACTTAC | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4034 | -132 | 3.9 | tgaAATaAaAATaATTcTt |
| -126 | 4.4 | AAAAATAATTCTTATTTAC | ||
| Proteus mirabilis HI4320 | PMI3252 | -57 | 4.2 | TGAAATAACAATGATTATC |
| -51 | 4.8 | AACAATGATTATCATTTAC | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4729 | -59 | 4.4 | TGAAATGAGACTCATTATT |
| -53 | 3.6 | GAgAcTcATtATtATTtaa | ||
|
Position: -124
Score: 5 Sequence: AATAATGTTTCTCATTATC
Locus tag: Dd1591_0589
|
||||
| Dd1591_0589 | -124 | 5 | AATAATGTTTCTCATTATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: CKO_00978 | ||||
| Ortholog function: FAD-binding 9 siderophore-interacting domain protein | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_00978 | -90 | 4.3 | GATAAGGTTTCTCATTATC |
| Serratia proteamaculans 568 | Spro_0924 | -93 | 4.3 | AATAATATTTATTGTTATC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0065 | -106 | 4.3 | AATGGTGATAATGATTATC |
| -100 | 4.9 | GATAATGATTATCGTTAGT | ||
|
Position: -76
Score: 4.4 Sequence: TTATATGATAATAATTATT
Position: -73
Score: 4.3 Sequence: TATGATAATAATTATTAAA
Position: -70
Score: 4.7 Sequence: GATAATAATTATTAAACTC
Locus tag: Dd1591_1100
|
||||
| Dd1591_1100 | -76 | 4.4 | TTATATGATAATAATTATT | |
| -73 | 4.3 | TATGATAATAATTATTAAA | ||
| -70 | 4.7 | GATAATAATTATTAAACTC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yiuA | ||||
| Ortholog function: siderophore ABC transporter, substrate binding periplasmic protein | ||||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00520 | -54 | 4.1 | GAGAATAATTCTCAGAATC |
| Enterobacter sp. 638 | Ent638_0573 | -131 | 4.4 | TCAATTGATAAGCATTATC |
| Erwinia amylovora ATCC 49946 | EAM_2096 | -48 | 4.5 | AAGAATGATAATATTTATC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3241 | -77 | 4.2 | ATATACGATAATAATTATC |
| -71 | 4.7 | GATAATAATTATCAAACTC | ||
|
Position: -213
Score: 4.5 Sequence: AATATTGAGAACCATTTAC
Locus tag: Dd1591_1319
|
||||
| Dd1591_1319 | -213 | 4.5 | AATATTGAGAACCATTTAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: CKO_02589 | ||||
| Ortholog function: TonB-dependent siderophore receptor | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_02589 | -114 | 4.2 | GCAAATGGTAATGATTTGC |
| -108 | 4.3 | GGTAATGATTTGCAATAAC | ||
| Enterobacter sp. 638 | Ent638_1079 | -109 | 4.3 | GGGAATGATTTGCAATATC |
| Proteus mirabilis HI4320 | PMI0363 | -103 | 4.9 | TAGAATAATAATAATTATC |
| -97 | 5 | AATAATAATTATCATTAGT | ||
|
Position: -210
Score: 5 Sequence: GATTATTATTATCATTAAT
Locus tag: Dd1591_1327
|
||||
| Dd1591_1327 | -210 | 5 | GATTATTATTATCATTAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ybdA | ||||
| Ortholog function: enterobactin exporter EntS, MFS family | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0591 | -98 | 4.8 | GATAATGAAATTAATTATC |
| -92 | 4.9 | GAAATTAATTATCGTTATC | ||
| Salmonella typhimurium LT2 | STM0593 | -98 | 4.9 | GATAATGATAGTAATTATC |
| -92 | 4.8 | GATAGTAATTATCGTTATC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_02570 | -99 | 4.9 | GATAATGATAGTAATTATC |
| -93 | 4.8 | GATAGTAATTATCGTTATC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00609 | -94 | 4.9 | GATAATGATAGTAATTATC |
| -88 | 4.8 | GATAGTAATTATCGTTATC | ||
| Enterobacter sp. 638 | Ent638_1123 | -94 | 4.9 | GATAATGATAGTAATTATC |
| -88 | 4.8 | GATAGTAATTATCGTTATC | ||
| Serratia proteamaculans 568 | Spro_3423 | -112 | 4.4 | ATAAATGAGTTTTATTATC |
| -106 | 4.4 | GAGTTTTATTATCATTATT | ||
|
Position: -138
Score: 5.3 Sequence: AGTAATAATTATCATTAAC
Locus tag: Dd1591_1694
|
||||
| Dd1591_1694 | -138 | 5.3 | AGTAATAATTATCATTAAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sufA | ||||
| Ortholog function: scaffold protein for iron-sulfur cluster assembly | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1684 | -65 | 4.4 | TGAACTGATAATCATTATC |
| -59 | 5.1 | GATAATCATTATCACTAAC | ||
| Salmonella typhimurium LT2 | STM1369 | -66 | 4.7 | TGAAGTGATAATCATTATC |
| -60 | 5.1 | GATAATCATTATCACTAAC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_01717 | -66 | 4.7 | TGAAGTGATAATCATTATC |
| -60 | 5.1 | GATAATCATTATCACTAAC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02141 | -66 | 4.7 | TGAAGTGATAATCATTATC |
| -60 | 5.1 | GATAATCATTATCACTAAC | ||
| Enterobacter sp. 638 | Ent638_1760 | -67 | 4.4 | TGAAGTGATAATCGTTATC |
| -61 | 4.7 | GATAATCGTTATCACTAAC | ||
| Yersinia pestis KIM | y1934 | -129 | 4.5 | TGAAGTGATAATTATTATC |
| -123 | 4.8 | GATAATTATTATCACTACC | ||
| Serratia proteamaculans 568 | Spro_2179 | -77 | 4.4 | TGAAGTGATAATCGTTATC |
| -71 | 4.7 | GATAATCGTTATCACTAAC | ||
| Proteus mirabilis HI4320 | PMI1416 | -66 | 4.4 | GATAAGGGTTATCATTACC |
| -60 | 4 | GGTTATCATTACCATTAGA | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2622 | -87 | 4.4 | GATAAAGGTTATCATTACC |
| -81 | 4.3 | GGTTATCATTACCATTATA | ||
|
Position: -326
Score: 5.3 Sequence: GATAATAACAATCATTATC
Position: -320
Score: 4.5 Sequence: AACAATCATTATCATTTGA
Locus tag: Dd1591_2036
|
||||
| Dd1591_2036 | -326 | 5.3 | GATAATAACAATCATTATC | |
| -320 | 4.5 | AACAATCATTATCATTTGA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hemS | ||||
| Ortholog function: hemin transport protein | ||||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03088 | -133 | 4 | GATAATACCTATCATTACC |
| Enterobacter sp. 638 | Ent638_1740 | -50 | 4.2 | TTTGTTGATAATGATTATC |
| -44 | 5.1 | GATAATGATTATCATTGTT | ||
| Erwinia amylovora ATCC 49946 | EAM_1642 | -65 | 4.2 | TTTGTTGATAATGATTATC |
| -59 | 4.8 | GATAATGATTATCATTCCA | ||
| Yersinia pestis KIM | y0542 | -48 | 3.7 | GATAATGCTTATCACACTG |
| -30 | 4.1 | GATAGTCGTTATCATTAAG | ||
| Serratia proteamaculans 568 | Spro_2168 | -68 | 4 | TCACATGATAATGATTCTC |
| -62 | 4.6 | GATAATGATTCTCACTTTG | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1846 | -59 | 4.7 | GAAAATGATTCTCATTCAT |
| Edwardsiella tarda EIB202 | ETAE_1798 | -10 | 4.1 | TTATACGATAATGATTATC |
| -4 | 5.1 | GATAATGATTATCATTAAG | ||
| Proteus mirabilis HI4320 | PMI1427 | -52 | 5.1 | GATAACGATAATGATTATC |
| -46 | 5.4 | GATAATGATTATCATAATC | ||
| -40 | 4.4 | GATTATCATAATCATAACC | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2633 | -54 | 4.7 | TATAACGATAATAATTCTC |
| -48 | 4.6 | GATAATAATTCTCACTATG | ||
|
Position: -217
Score: 3.8 Sequence: GTTATTTTTAATCATATTT
Position: -197
Score: 4.9 Sequence: GATAATGAAAATAGTTATC
Position: -191
Score: 3.8 Sequence: GAAAATAGTTATCAGAACC
Position: -185
Score: 3.9 Sequence: AGTTATCAGAACCAATCTC
Position: -153
Score: 5.5 Sequence: AATAATGAAAATCATTATC
Position: -147
Score: 4.7 Sequence: GAAAATCATTATCATGATT
Position: -144
Score: 3.4 Sequence: AATCATTATCATGATTAAA
Position: -124
Score: 3.4 Sequence: GATAATGCGTTGAATTTAT
Locus tag: Dd1591_2236
|
||||
| Dd1591_2236 | -217 | 3.8 | GTTATTTTTAATCATATTT | |
| -197 | 4.9 | GATAATGAAAATAGTTATC | ||
| -191 | 3.8 | GAAAATAGTTATCAGAACC | ||
| -185 | 3.9 | AGTTATCAGAACCAATCTC | ||
| -153 | 5.5 | AATAATGAAAATCATTATC | ||
| -147 | 4.7 | GAAAATCATTATCATGATT | ||
| -144 | 3.4 | AATCATTATCATGATTAAA | ||
| -124 | 3.4 | GATAATGCGTTGAATTTAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ftnA | ||||
| Ortholog function: ferritin | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1905 | -127 | 3.4 | GgTAATGcgttTtATTccC |
| -121 | 3 | GcgttTtATtccCATTcgt | ||
| Salmonella typhimurium LT2 | STM1935 | -100 | 4 | AATAATTAAATTTAATATT |
| Citrobacter koseri ATCC BAA-895 | CKO_01042 | -97 | 4.3 | AATAATTAAATTTATTATT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02402 | -161 | 4 | ATAAATTAAAAGCATTCTC |
| -155 | 3.8 | TAAAAGCATTCTCATTTAT | ||
| Enterobacter sp. 638 | Ent638_2486 | -103 | 3.7 | TATTTTAATAAATAATATC |
| -97 | 3.6 | AATAAATAATATCTTTATT | ||
| Erwinia amylovora ATCC 49946 | EAM_2940 | -131 | 4.4 | TGGAATGATTATCAATTAC |
| Yersinia pestis KIM | y2524 | -93 | 4.4 | AATAATGTGAATGATTATC |
| -87 | 4.1 | GTGAATGATTATCATGATG | ||
| Serratia proteamaculans 568 | Spro_1942 | -174 | 4.5 | GAAAATAGTTATCATAATT |
| -168 | 4 | AGTTATCATAATTATTTAA | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2473 | -158 | 4.6 | TTAAATGATAATGAATATC |
| -152 | 4.8 | GATAATGAATATCAATAGC | ||
| Proteus mirabilis HI4320 | PMI1007 | -184 | 4.7 | GTTAATGATAATCAATTCC |
| -178 | 4.1 | GATAATCAATTCCATTAAT | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2689 | -147 | 4.4 | TTAAATGAGATTCATTTTC |
| -141 | 4.4 | GAGATTCATTTTCATTTTT | ||
|
Position: -42
Score: 4.1 Sequence: TCAAATGAAAATGGTTATC
Position: -36
Score: 5.4 Sequence: GAAAATGGTTATCATTATC
Position: -30
Score: 4.5 Sequence: GGTTATCATTATCATTGTT
Locus tag: Dd1591_2600
|
||||
| Dd1591_2600 | -42 | 4.1 | TCAAATGAAAATGGTTATC | |
| -36 | 5.4 | GAAAATGGTTATCATTATC | ||
| -30 | 4.5 | GGTTATCATTATCATTGTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sitA | ||||
| Ortholog function: iron ABC transporter, periplasmic substrate-binding protein | ||||
| Salmonella typhimurium LT2 | STM2861 | -99 | 4.5 | GCAAATAAGAATTATTTTC |
| -93 | 4.2 | AAGAATTATTTTCATTTAT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_04090 | -84 | 4.5 | GTAAATAAGAATTATTTTC |
| -78 | 4.2 | AAGAATTATTTTCATTTAT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_00940 | -111 | 4.1 | GATAAAGATAATTTTTCTC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03078 | -99 | 4.5 | GCAAATAAGAATTATTTTC |
| -93 | 4.2 | AAGAATTATTTTCATTTAT | ||
| Enterobacter sp. 638 | Ent638_1111 | -98 | 4.9 | TTTAATGATAATTATTTTC |
| -92 | 4.5 | GATAATTATTTTCATTTAA | ||
| Yersinia pestis KIM | y1897 | -39 | 5.2 | GGTATTGATAATCATTTTC |
| -33 | 4.7 | GATAATCATTTTCATTTGT | ||
| Serratia proteamaculans 568 | Spro_2133 | -41 | 5.4 | GATATTGATAATCATTTTC |
| -35 | 4.6 | GATAATCATTTTCATTTGA | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2392 | -53 | 5.1 | GATATTGATAATTATTCTC |
| Proteus mirabilis HI4320 | PMI1027 | -63 | 4.2 | TGAAATGATATTGATAATC |
| -57 | 5.5 | GATATTGATAATCATTATC | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2672 | -49 | 5.2 | GATATTGATAATCGTTATC |
| -43 | 4.5 | GATAATCGTTATCATATAC | ||
|
Position: -123
Score: 4.6 Sequence: ATTAATAAGAACTATTATC
Position: -117
Score: 4.7 Sequence: AAGAACTATTATCATTATT
Locus tag: Dd1591_2784
|
||||
| Dd1591_2784 | -123 | 4.6 | ATTAATAAGAACTATTATC | |
| -117 | 4.7 | AAGAACTATTATCATTATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yijD | ||||
| Ortholog function: iron permease FTR1 | ||||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01045 | -76 | 5 | TGTAATGATAATCACTATC |
| -70 | 4.2 | GATAATCACTATCATAAAT | ||
| Enterobacter sp. 638 | Ent638_1545 | -76 | 4.9 | CGTAATGATAATCACTATC |
| Erwinia amylovora ATCC 49946 | EAM_2059 | -80 | 4.6 | GATAATGATAATCCCTATC |
| Yersinia pestis KIM | y2452 | -84 | 4.4 | CAGAATGATAATCACAATC |
| -78 | 4.3 | GATAATCACAATCGTTTTA | ||
| Serratia proteamaculans 568 | Spro_2929 | -109 | 4.8 | CAGAATGATAATCACTATC |
|
Position: -92
Score: 5.2 Sequence: GTTAATGATAATAATTATT
Position: -89
Score: 4.8 Sequence: AATGATAATAATTATTATT
Position: -86
Score: 5.2 Sequence: GATAATAATTATTATTAAT
Position: -83
Score: 4.9 Sequence: AATAATTATTATTAATATT
Locus tag: Dd1591_2835
|
||||
| Dd1591_2835 | -92 | 5.2 | GTTAATGATAATAATTATT | |
| -89 | 4.8 | AATGATAATAATTATTATT | ||
| -86 | 5.2 | GATAATAATTATTATTAAT | ||
| -83 | 4.9 | AATAATTATTATTAATATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hemS | ||||
| Ortholog function: hemin transport protein | ||||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03088 | -133 | 4 | GATAATACCTATCATTACC |
| Enterobacter sp. 638 | Ent638_1740 | -50 | 4.2 | TTTGTTGATAATGATTATC |
| -44 | 5.1 | GATAATGATTATCATTGTT | ||
| Erwinia amylovora ATCC 49946 | EAM_1642 | -65 | 4.2 | TTTGTTGATAATGATTATC |
| -59 | 4.8 | GATAATGATTATCATTCCA | ||
| Yersinia pestis KIM | y0542 | -48 | 3.7 | GATAATGCTTATCACACTG |
| -30 | 4.1 | GATAGTCGTTATCATTAAG | ||
| Serratia proteamaculans 568 | Spro_2168 | -68 | 4 | TCACATGATAATGATTCTC |
| -62 | 4.6 | GATAATGATTCTCACTTTG | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1846 | -59 | 4.7 | GAAAATGATTCTCATTCAT |
| Edwardsiella tarda EIB202 | ETAE_1798 | -10 | 4.1 | TTATACGATAATGATTATC |
| -4 | 5.1 | GATAATGATTATCATTAAG | ||
| Proteus mirabilis HI4320 | PMI1427 | -52 | 5.1 | GATAACGATAATGATTATC |
| -46 | 5.4 | GATAATGATTATCATAATC | ||
| -40 | 4.4 | GATTATCATAATCATAACC | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2633 | -54 | 4.7 | TATAACGATAATAATTCTC |
| -48 | 4.6 | GATAATAATTCTCACTATG | ||
|
Position: -53
Score: 4.2 Sequence: AACAAAAATAATTATTATT
Position: -50
Score: 5.1 Sequence: AAAAATAATTATTATTATT
Position: -47
Score: 5.1 Sequence: AATAATTATTATTATTTTT
Locus tag: Dd1591_3000
|
||||
| Dd1591_3000 | -53 | 4.2 | AACAAAAATAATTATTATT | |
| -50 | 5.1 | AAAAATAATTATTATTATT | ||
| -47 | 5.1 | AATAATTATTATTATTTTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: Spro_1015 | ||||
| Ortholog function: iron(III) ABC transporter, periplasmic protein | ||||
| Yersinia pestis KIM | y3342 | -41 | 4.2 | ACAAACGATTTTGATTATC |
| -35 | 4.6 | GATTTTGATTATCATTCGC | ||
| Serratia proteamaculans 568 | Spro_1015 | -52 | 4.3 | GCTAATGAGAGTGATTATC |
|
Position: -65
Score: 4.6 Sequence: GCACTTGATAATCATTATC
Position: -59
Score: 4.3 Sequence: GATAATCATTATCAACTTT
Locus tag: Dd1591_3295
|
||||
| Dd1591_3295 | -65 | 4.6 | GCACTTGATAATCATTATC | |
| -59 | 4.3 | GATAATCATTATCAACTTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: mntH | ||||
| Ortholog function: Mn2+/Fe2+ transporter, NRAMP family | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2392 | -68 | 4.7 | GAATTTGATAATCATTCTC |
| -62 | 4.2 | GATAATCATTCTCGTTTGG | ||
| Salmonella typhimurium LT2 | STM2408 | -68 | 4.5 | GCACTTGATAATCATTATC |
| -62 | 4.8 | GATAATCATTATCAATAAA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_00404 | -50 | 4.3 | GCACTTGATAATCATTCTC |
| -44 | 4.5 | GATAATCATTCTCAATAAA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02743 | -68 | 4.3 | GAACTTGATAATCATTCGC |
| -62 | 4.3 | GATAATCATTCGCATTTTG | ||
| Enterobacter sp. 638 | Ent638_2926 | -67 | 4.8 | GATCTTGATAATCATTCTC |
| -61 | 4.8 | GATAATCATTCTCATTTTG | ||
| Yersinia pestis KIM | y1500 | -78 | 4 | GCGCTTGATAATTATTCTC |
| -72 | 4.6 | GATAATTATTCTCATTTAA | ||
| Serratia proteamaculans 568 | Spro_3415 | -66 | 4.3 | GCACTTGATAATTATTATC |
| -60 | 5.2 | GATAATTATTATCATTTAC | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0843 | -63 | 4.5 | GCACTTGATAATCATTATC |
| -57 | 5.2 | GATAATCATTATCATTTTT | ||
| Edwardsiella tarda EIB202 | ETAE_1142 | -134 | 4.5 | GCAGTTGATAATCATTATC |
|
Position: -35
Score: 5.2 Sequence: GATATTAGTTATCATTATC
Locus tag: Dd1591_3442
|
||||
| Dd1591_3442 | -35 | 5.2 | GATATTAGTTATCATTATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yjjZ | ||||
| Ortholog function: putative membrane protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4567 | -60 | 4.4 | GCAAATGATAAAAATTATC |
| -37 | 5.2 | GATATTGGTTATCATTATC | ||
| Salmonella typhimurium LT2 | STM4552 | -37 | 5.2 | GATATTGGTTATCATTATC |
| -31 | 4.2 | GGTTATCATTATCAATTCC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03427 | 2 | 4.9 | GCTATTGGTTATCATTATC |
| 8 | 4.1 | GGTTATCATTATCGGTATC | ||
| Enterobacter sp. 638 | Ent638_0529 | -37 | 5.2 | GATATTGGTTATCATTATC |
| -31 | 4 | GGTTATCATTATCATATTG | ||
| Erwinia amylovora ATCC 49946 | EAM_0565 | -70 | 4.3 | CAAAGTGATAATGATTAAC |
| -64 | 4.3 | GATAATGATTAACATATGC | ||
| -47 | 4.9 | GCTATTGGTAATCATTATC | ||
| -41 | 4.8 | GGTAATCATTATCATTTAT | ||
| Yersinia pestis KIM | y3754 | -4 | 4.9 | GATATTGGTTATGATTATC |
| 2 | 5.2 | GGTTATGATTATCATTATC | ||
| Serratia proteamaculans 568 | Spro_0646 | -39 | 4.7 | GATATTAGTTCTCATTATC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0738 | -89 | 5 | GATATTAGTTATCATTATC |
| -83 | 4.5 | AGTTATCATTATCATTTTT | ||
| Proteus mirabilis HI4320 | PMI2497 | -27 | 5.3 | AATAATGAAAATCATTATC |
| -21 | 5.2 | GAAAATCATTATCATTAAC | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4253 | -92 | 5.2 | GATATTGGTAATCATTATC |
| -86 | 4.7 | GGTAATCATTATCATTTGT | ||
|
Position: -152
Score: 4.4 Sequence: AATAATGAGAACGACTATC
Locus tag: Dd1591_3761
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| Dd1591_3761 | -152 | 4.4 | AATAATGAGAACGACTATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: exbB | ||||
| Ortholog function: TonB-dependent siderophore transporter component ExbB | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3006 | -82 | 4.1 | AGTAATGAGAACGACTATC |
| Salmonella typhimurium LT2 | STM3159 | -82 | 4.1 | AGTAATGAGAACGACTATC |
| Citrobacter koseri ATCC BAA-895 | CKO_04401 | -97 | 4.1 | AGTAATGAGAACGACTATC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03426 | -97 | 4.3 | ACTAATGAGAACCACTATC |
| Enterobacter sp. 638 | Ent638_3417 | -97 | 4.3 | ACTAATGAGAACCACTATC |
| Yersinia pestis KIM | y3495 | -71 | 4.8 | ACTAATGATAATTACTATC |
| Serratia proteamaculans 568 | Spro_4211 | -94 | 4.4 | AATAATGAGAACTACTATC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0358 | -206 | 4.3 | AATAATGAGAACGACTATC |
| Proteus mirabilis HI4320 | PMI0029 | -170 | 4.8 | AGTAATGATAATTACTATC |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3941 | -98 | 5.1 | AATAATGATAATTACTATC |