Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of PurR regulog to Yersinia pseudotuberculosis PB1/+

Reference regulog properties
Source regulog: PurR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Purine metabolism
Effector: Hypoxanthine; Guanine
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Yersinia pseudotuberculosis PB1/+
Orthologous TF(s) YPTS_2374
Regulated genes 18
Built upon 313 sites [see more]
Predicted regulatory interactions in Yersinia pseudotuberculosis PB1/+
Locus tag Position Score Sequence
Position: -36
Score: 5.1
Sequence: GCGCAAACGATTGCTT
Locus tag: YPTS_0032
YPTS_0032 -36 5.1 GCGCAAACGATTGCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: xanP
Ortholog function: xanthine/uracil permease, NCS2 family
Escherichia coli str. K-12 substr. MG1655 b3654 -68 4.8 TGGCAAACGTTTGCTT
30 4.9 GCGCAACCGGTTGCGC
Salmonella typhimurium LT2 STM3747 -68 4.9 TCGCAATCGTTTGCTT
30 4.9 GCGCAACCGGTTGCGC
Citrobacter koseri ATCC BAA-895 CKO_05111 -53 5.1 ATGCAATCGTTTGCTT
45 4.9 GCGCAACCGGTTGCGC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04013 -68 4.8 TGGCAAACGTTTGCTT
30 4.9 GCGCAACCGGTTGCGC
Enterobacter sp. 638 Ent638_0073 -68 4.9 TCGCAACCGTTTGCTT
30 4.8 GCGCAACCGATTGCGC
Erwinia amylovora ATCC 49946 EAM_0040 -69 4.6 TAGCAAACGATTGCTT
Yersinia pestis KIM y0107 -18 5.1 GCGCAAACGATTGCTT
Serratia proteamaculans 568 Spro_4873 -70 5.1 GCGCAACCGTTTGCTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0035 -74 4.9 TAGCAAACGTTTGCTT
Edwardsiella tarda EIB202 ETAE_0025 -70 5.3 ACGCAAACGATTGCTT
Proteus mirabilis HI4320 PMI2868 -68 5.3 ACGCAAACGATTGCTT
Photorhabdus luminescens subsp. laumondii TTO1 plu0247 -68 5.3 ACGCAAACGATTGCTT
Position: -129
Score: 3.6
Sequence: CCTTAATCGTTTGCGT
Position: -90
Score: 3.8
Sequence: GCGCAAACGCGTATTA
Locus tag: YPTS_0228
YPTS_0228 -129 3.6 CCTTAATCGTTTGCGT
-90 3.8 GCGCAAACGCGTATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yhhQ
Ortholog function: conserved inner membrane protein
Escherichia coli str. K-12 substr. MG1655 b3471 -159 3.7 AGGTTAACGATTGCGT
Salmonella typhimurium LT2 STM3579 -108 3.7 AGGTTAACGATTGCGT
Citrobacter koseri ATCC BAA-895 CKO_04901 -109 3.8 AAGTTAACGATTGCGT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03837 -147 3.8 AGGTTAACGTTTGCGC
-93 3.7 ATGCAGCCGTTTTTAA
Enterobacter sp. 638 Ent638_3878 -160 3.7 AGGTTAACGATTGCGT
Erwinia amylovora ATCC 49946 EAM_3301 -164 3.8 GTCCAAAAGATTTCGC
Yersinia pestis KIM y0408 -90 3.8 GCGCAAACGCGTATTA
Serratia proteamaculans 568 Spro_0204 -257 4 GCGTTAACGTTTGCGT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4354 -150 4.1 ACGACAACGTTTGCGC
Edwardsiella tarda EIB202 ETAE_0019 -127 3.8 GCGTTAACGATTGCGT
Proteus mirabilis HI4320 PMI3596 -53 3.8 AATCATACGTTTTATT
Position: -180
Score: 5.7
Sequence: ACGCAATCGTTTTCGC
Locus tag: YPTS_0321
YPTS_0321 -180 5.7 ACGCAATCGTTTTCGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: purH
Ortholog function: phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase
Escherichia coli str. K-12 substr. MG1655 b4006 -123 5.8 GCGCAAACGTTTTCGT
Salmonella typhimurium LT2 STM4176 -123 5.8 GCGCAAACGTTTTCGT
Citrobacter koseri ATCC BAA-895 CKO_02983 -123 5.8 GCGCAAACGTTTTCGT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04388 -126 5.8 GCGCAAACGTTTTCGT
Enterobacter sp. 638 Ent638_0216 -60 5.8 GCGCAAACGTTTTCGT
Erwinia amylovora ATCC 49946 EAM_0249 -144 5.7 GCGCAAACGTTTTCGC
Yersinia pestis KIM y0502 -111 5.7 ACGCAATCGTTTTCGC
Serratia proteamaculans 568 Spro_0293 -179 5.9 ACGCAAACGTTTTCGC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0241 -159 5.9 ACGCAAACGTTTTCGC
Edwardsiella tarda EIB202 ETAE_0186 -116 6 ACGCAAACGTTTTCGT
Proteus mirabilis HI4320 PMI2768 -155 5.6 ACGCAAACGTTTGCGT
Photorhabdus luminescens subsp. laumondii TTO1 plu0495 -283 6 ACGCAAACGTTTTCGT
Position: -240
Score: 5.1
Sequence: TCGCAACCGTTTACTC
Locus tag: YPTS_0647
YPTS_0647 -240 5.1 TCGCAACCGTTTACTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: carA
Ortholog function: carbamoyl-phosphate synthase small subunit
Escherichia coli str. K-12 substr. MG1655 b0032 -236 4.9 GCGCAAGCGTTTTCCA
Salmonella typhimurium LT2 STM0066 -236 5.1 GCGCAAGCGTTTTCTA
Citrobacter koseri ATCC BAA-895 CKO_03351 -209 5.1 ACGCAAGCGTTTTCCA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00040 -208 5 CCGCAAGCGTTTTCTC
Enterobacter sp. 638 Ent638_0591 -235 4.7 GTACAAACGTTTTCCT
Erwinia amylovora ATCC 49946 EAM_0660 -239 3.9 AGACAACCGATTTTAT
Yersinia pestis KIM y3693 -213 5.1 TCGCAACCGTTTACTC
Serratia proteamaculans 568 Spro_0713 -240 4.7 CCGCAACCGTTTACCA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3871 -239 5 TAGCAACCGTTTACTT
Proteus mirabilis HI4320 PMI0020 -240 4.5 AAGCAAACGGTTAAAT
Position: -116
Score: 5.5
Sequence: ACGCAACCGTTTTCCT
Locus tag: YPTS_1080
YPTS_1080 -116 5.5 ACGCAACCGTTTTCCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: purE
Ortholog function: phosphoribosylaminoimidazole carboxylase catalytic subunit
Escherichia coli str. K-12 substr. MG1655 b0523 -87 5.5 ACGCAACCGTTTTCCT
Salmonella typhimurium LT2 STM0534 -87 5.5 ACGCAACCGTTTTCCT
Citrobacter koseri ATCC BAA-895 CKO_02635 -87 5.5 ACGCAACCGTTTTCCT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00478 -88 5.5 ACGCAACCGTTTTCCT
Enterobacter sp. 638 Ent638_0977 -86 5.5 ACGCAACCGTTTTCCT
Erwinia amylovora ATCC 49946 EAM_1060 -111 5.5 ACGCAACCGTTTTCCT
Yersinia pestis KIM y1103 -116 5.5 ACGCAACCGTTTTCCT
Serratia proteamaculans 568 Spro_1163 -108 5.5 ACGCAACCGTTTTCCT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3156 -130 5.5 ACGCAACCGTTTTCCT
Edwardsiella tarda EIB202 ETAE_2700 -114 5.7 ACGCAAACGTTTTCCT
Proteus mirabilis HI4320 PMI2161 -91 5.7 ACGCAAACGTTTTCCT
Photorhabdus luminescens subsp. laumondii TTO1 plu3807 -99 5.5 ACGCAATCGTTTTCCT
Position: -156
Score: 3.8
Sequence: GGGCAGTCGCTTTCGA
Locus tag: YPTS_1085
YPTS_1085 -156 3.8 GGGCAGTCGCTTTCGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: folD
Ortholog function: 5,10-methylene-tetrahydrofolate dehydrogenase
Salmonella typhimurium LT2 STM0542 -89 4.3 ACACAAACGTTAACTG
Citrobacter koseri ATCC BAA-895 CKO_02629 -89 4.6 ACGCAAACGATAACTG
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00484 -88 3.7 CAGCAAACGAGGACTG
Yersinia pestis KIM y1110 -155 3.8 GGGCAGTCGCTTTCGA
Proteus mirabilis HI4320 PMI2155 21 4.1 GGGAAAACGATTGCGC
Photorhabdus luminescens subsp. laumondii TTO1 plu4317 21 4.1 GGGAAAACGATTGCGC
Position: -254
Score: 5.4
Sequence: TCGCAAACGTTTACTT
Locus tag: YPTS_1543
YPTS_1543 -254 5.4 TCGCAAACGTTTACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: pyrD
Ortholog function: dihydroorotate dehydrogenase
Escherichia coli str. K-12 substr. MG1655 b0945 -102 4.2 CGGAAAACGTTTGCGT
Salmonella typhimurium LT2 STM1058 -101 4 AGGAAAACGATTGCTA
Citrobacter koseri ATCC BAA-895 CKO_02123 -101 4 AGGAAAACGATTGCTA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00974 -111 4.4 AGGTAATCGTTTGCGC
Enterobacter sp. 638 Ent638_1457 -110 4.3 AGGAAAACGATTGCGC
Erwinia amylovora ATCC 49946 EAM_1366 -101 3.8 AAATAAACGTTTTTTA
Yersinia pestis KIM y2755 -254 5.4 TCGCAAACGTTTACTT
Serratia proteamaculans 568 Spro_1740 -110 4.2 GGGAAAACGATTGCGT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2538 -126 4.7 CCGCAAACGTTTTACT
Edwardsiella tarda EIB202 ETAE_1248 -108 3.9 AGTAAAACGTTTGCTT
Proteus mirabilis HI4320 PMI0771 -102 4.2 ATTGAAACGTTTACTT
Position: -85
Score: 5.9
Sequence: ACGCAATCGTTTTCGT
Locus tag: YPTS_1775
YPTS_1775 -85 5.9 ACGCAATCGTTTTCGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: purT
Ortholog function: phosphoribosylglycinamide formyltransferase 2
Escherichia coli str. K-12 substr. MG1655 b1849 -53 6 ACGCAAACGTTTTCGT
Salmonella typhimurium LT2 STM1883 -51 6 ACGCAAACGTTTTCGT
Citrobacter koseri ATCC BAA-895 CKO_01117 -52 6 ACGCAAACGTTTTCGT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02364 -56 6 ACGCAAACGTTTTCGT
Enterobacter sp. 638 Ent638_2418 -49 6 ACGCAAACGTTTTCGT
Erwinia amylovora ATCC 49946 EAM_1994 -58 6 ACGCAAACGTTTTCGT
Yersinia pestis KIM y2533 -85 5.9 ACGCAATCGTTTTCGT
Serratia proteamaculans 568 Spro_2805 -74 6 ACGCAAACGTTTTCGT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2477 -59 6 ACGCAAACGTTTTCGT
Edwardsiella tarda EIB202 ETAE_1838 -107 5.9 ACGCAAACGGTTTCGT
Proteus mirabilis HI4320 PMI2187 -50 5.4 ATGCAAACGTTTGCGT
Position: -62
Score: 4.3
Sequence: AGGCAAACGATTAACA
Locus tag: YPTS_2374
YPTS_2374 -62 4.3 AGGCAAACGATTAACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: purR
Ortholog function: purine nucleotide synthesis repressor
Escherichia coli str. K-12 substr. MG1655 b1658 -60 5.4 AGGCAAACGTTTACCT
28 4.4 GAGCAAACGTTTCCAC
Salmonella typhimurium LT2 STM1430 -58 5.4 AGGCAAACGTTTACCT
28 4.3 GGGCAAACGTTTCCAC
Citrobacter koseri ATCC BAA-895 CKO_01672 -60 5.6 AGGCAAACGTTTACTT
28 4.4 GAGCAAACGTTTCCAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01996 -59 5.7 AGGCAAACGTTTACGT
28 4.6 GCGCAAACGTTTCCAC
Enterobacter sp. 638 Ent638_1789 -60 5.4 AGGCAAACGTTTACCT
28 4.6 GCGCAAACGTTTCCAC
Erwinia amylovora ATCC 49946 EAM_1663 -62 4.3 AGGCAAACGATTAACA
Yersinia pestis KIM y1950 -62 4.3 AGGCAAACGATTAACA
Serratia proteamaculans 568 Spro_2195 -62 4.3 AGGCAAACGATTAACA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1925 -60 4.3 AGGCAAACGATTAACA
Edwardsiella tarda EIB202 ETAE_1674 -57 4.3 AGGCAAACGATTAACA
Position: -74
Score: 5.9
Sequence: ACGCAAACGTTTTCTT
Locus tag: YPTS_2708
YPTS_2708 -74 5.9 ACGCAAACGTTTTCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cvpA
Ortholog function: membrane protein required for colicin V production
Escherichia coli str. K-12 substr. MG1655 b2313 -72 5.9 ACGCAAACGTTTTCTT
Salmonella typhimurium LT2 STM2363 -72 5.9 ACGCAAACGTTTTCTT
Citrobacter koseri ATCC BAA-895 CKO_00473 -72 5.9 ACGCAAACGTTTTCTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02703 -71 5.9 ACGCAAACGTTTTCTT
Enterobacter sp. 638 Ent638_2862 -72 5.9 ACGCAAACGTTTTCTT
Erwinia amylovora ATCC 49946 EAM_2319 -92 5.9 ACGCAAACGTTTTCTT
Yersinia pestis KIM y1604 -74 5.9 ACGCAAACGTTTTCTT
Serratia proteamaculans 568 Spro_3329 -74 6 ACGCAAACGTTTACGT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3053 -90 5.9 ACGCAAACGTTTTCTT
Proteus mirabilis HI4320 PMI1784 -71 6 ACGCAAACGTTTTCGT
Photorhabdus luminescens subsp. laumondii TTO1 plu3168 -72 6 ACGCAAACGTTTTCGT
Position: -280
Score: 4.9
Sequence: TCGCAAACGTTTGCCT
Locus tag: YPTS_2900
YPTS_2900 -280 4.9 TCGCAAACGTTTGCCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: purM
Ortholog function: phosphoribosylformylglycinamidine cyclo-ligase
Escherichia coli str. K-12 substr. MG1655 b2499 -79 5.1 TCGCAAACGTTTGCTT
Salmonella typhimurium LT2 STM2499.S -63 5.1 TCGCAAACGTTTGCTT
Citrobacter koseri ATCC BAA-895 CKO_00291 -299 5.1 TCGCAAACGTTTGCTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02824 -74 5.1 TCGCAAACGTTTGCTT
Enterobacter sp. 638 Ent638_2988 -79 4.9 TCGCAAACGTTTGCCT
Erwinia amylovora ATCC 49946 EAM_2441 -84 5.1 TCGCAAACGTTTGCTT
Yersinia pestis KIM y1407 -242 4.9 TCGCAAACGTTTGCCT
Serratia proteamaculans 568 Spro_3524 -59 4.9 TCGCAAACGTTTGCCT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1254 -129 4.6 TCGCAAACGATTGCCT
Edwardsiella tarda EIB202 ETAE_1086 -116 4.9 TAGCAAACGTTTGCTT
Proteus mirabilis HI4320 PMI1575 -79 5.1 TCGCAAACGTTTGCTT
Photorhabdus luminescens subsp. laumondii TTO1 plu2760 -80 5.1 TCGCAAACGTTTGCTT
Position: -77
Score: 5.2
Sequence: AGGCAATCGATTACGC
Locus tag: YPTS_2941
YPTS_2941 -77 5.2 AGGCAATCGATTACGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: guaB
Ortholog function: inosine-5'-monophosphate dehydrogenase
Escherichia coli str. K-12 substr. MG1655 b2508 -69 5.2 ATGCAATCGGTTACGC
Salmonella typhimurium LT2 STM2511 -68 5.3 ATGCAACCGATTACGT
Citrobacter koseri ATCC BAA-895 CKO_00279 -69 5.3 ATGCAATCGGTTTCGC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02834 -66 5.2 ATGCAATCGGTTACGC
Enterobacter sp. 638 Ent638_2999 -67 5.2 ATGCAATCGGTTACGC
Erwinia amylovora ATCC 49946 EAM_2465 -78 4.9 AGGCAATCGATTACGG
Yersinia pestis KIM y1362 6 5.2 AGGCAATCGATTACGC
Serratia proteamaculans 568 Spro_3596 -78 5.1 AGGCAACCGATTACGC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3209 -79 5.2 AGGCAATCGATTACGC
Edwardsiella tarda EIB202 ETAE_2787 -79 5 AGGCAACCGGTTTCGG
Proteus mirabilis HI4320 PMI1546 -77 4.9 AAGCAACCGATTACGG
Photorhabdus luminescens subsp. laumondii TTO1 plu2713 -80 5.3 AGGCAACCGATTACGT
Position: -323
Score: 4.5
Sequence: AGCCAATCGTTTGCGT
Locus tag: YPTS_2978
YPTS_2978 -323 4.5 AGCCAATCGTTTGCGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glyA
Ortholog function: serine/glycine hydroxymethyltransferase
Escherichia coli str. K-12 substr. MG1655 b2551 -134 4.5 AGGTAATCGTTTGCGT
Salmonella typhimurium LT2 STM2555 -132 4.5 AGGTAATCGTTTGCGT
Citrobacter koseri ATCC BAA-895 CKO_00237 -126 4.5 AGGTAATCGTTTGCGT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02876 -133 4.5 AGCCAATCGTTTGCGT
Enterobacter sp. 638 Ent638_3036 -131 4.7 AGGTAAACGTTTGCGT
Erwinia amylovora ATCC 49946 EAM_2497 -129 4.5 AGCCAATCGTTTGCGT
Yersinia pestis KIM y1322 -324 4.5 AGCCAATCGTTTGCGT
Serratia proteamaculans 568 Spro_3638 -135 4 TGCCAATCGTTTGCGT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3250 -152 3.8 AGCTAATCGTTTGCGT
Edwardsiella tarda EIB202 ETAE_2821 -147 4 TGCCAAACGATTGCGT
Proteus mirabilis HI4320 PMI1867 -128 4.7 TAGCAAACGATTGCGT
Photorhabdus luminescens subsp. laumondii TTO1 plu3291 -126 5.2 ATGCAATCGTTTGCGT
Position: -130
Score: 5.9
Sequence: ACGCAAACGGTTTCGT
Locus tag: YPTS_2990
YPTS_2990 -130 5.9 ACGCAAACGGTTTCGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: purL
Ortholog function: phosphoribosylformylglycinamidine synthase
Escherichia coli str. K-12 substr. MG1655 b2557 -92 5.9 ACGCAAACGGTTTCGT
Salmonella typhimurium LT2 STM2565 -90 5.9 ACGCAAACGGTTTCGT
Citrobacter koseri ATCC BAA-895 CKO_00226 29 5.9 ACGCAAACGGTTTCGT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02882 -91 5.9 ACGCAAACGGTTTCGT
Enterobacter sp. 638 Ent638_3042 -101 5.9 ACGCAAACGGTTTCGT
Erwinia amylovora ATCC 49946 EAM_2502 -104 5.6 GCGCAAACGGTTTCGT
Yersinia pestis KIM y1309 -130 5.9 ACGCAAACGGTTTCGT
Serratia proteamaculans 568 Spro_3654 -113 5.9 ACGCAAACGGTTTCGT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3258 -113 5.9 ACGCAAACGGTTTCGT
Edwardsiella tarda EIB202 ETAE_0774 -116 5.9 ACGCAAACGGTTTCGT
Proteus mirabilis HI4320 PMI1875 -98 5.9 ACGCAAACGGTTTCGT
Photorhabdus luminescens subsp. laumondii TTO1 plu3317 -91 5.9 ACGCAAACGGTTTCGT
Position: -104
Score: 4
Sequence: GAGCAAAAGGTATCGT
Position: -98
Score: 3.8
Sequence: AAGGTATCGTTTGCGT
Locus tag: YPTS_3313
YPTS_3313 -104 4 GAGCAAAAGGTATCGT
-98 3.8 AAGGTATCGTTTGCGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gcvT
Ortholog function: Glycine cleavage system, aminomethyltransferase (EC 2.1.2.10)
Escherichia coli str. K-12 substr. MG1655 b2905 -106 3.8 AAGAGAACGATTGCGT
Salmonella typhimurium LT2 STM3055 -108 4 AAGAGAACGTTTGCGT
Citrobacter koseri ATCC BAA-895 CKO_04269 -106 4 AAGAGAACGTTTGCGT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03341 -107 4 AAGAGAACGTTTGCGT
Enterobacter sp. 638 Ent638_3324 -104 4 AAGAGAACGTTTGCGT
Erwinia amylovora ATCC 49946 EAM_2791 -74 4 AGGGTAACGTTTGCGT
Yersinia pestis KIM y3294 -104 4 GAGCAAAAGGTATCGT
-98 3.8 AAGGTATCGTTTGCGT
Serratia proteamaculans 568 Spro_3916 -163 3.8 AAGGTATCGTTTGCGT
Photorhabdus luminescens subsp. laumondii TTO1 plu3598 -108 3.8 AAGATATCGTTTGCGT
Position: -112
Score: 4.4
Sequence: AGGCAATCGTTTGTAT
Locus tag: YPTS_3321
YPTS_3321 -112 4.4 AGGCAATCGTTTGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: serA
Ortholog function: D-3-phosphoglycerate dehydrogenase
Escherichia coli str. K-12 substr. MG1655 b2913 -95 4.5 ACGCAAACGTTCATAT
Salmonella typhimurium LT2 STM3062 -102 4.2 GCGCAAACGTTCATAT
Citrobacter koseri ATCC BAA-895 CKO_04278 -105 4.5 ACGCAAACGTTCATAT
-87 4.3 CCGCAATAGTTTTTTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03348 -99 4.5 ACGCAAACGTTCATAT
Enterobacter sp. 638 Ent638_3332 -100 4.5 ACGCAAACGTTCATAT
Erwinia amylovora ATCC 49946 EAM_2798 -213 4.8 AGGCAATCGTTTTTAT
Yersinia pestis KIM y3301 9 4.4 AGGCAATCGTTTGTAT
Serratia proteamaculans 568 Spro_3923 -99 4.1 GGGCAATCGTTTGTAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3905 -98 4.4 AAGCAATCGTTTGTAT
Proteus mirabilis HI4320 PMI2031 -94 4 GTGCAATCGGTTGTAT
Photorhabdus luminescens subsp. laumondii TTO1 plu3605 -91 4.3 TAGCAATCGTTTATAT
Position: -323
Score: 4.1
Sequence: AGGTAATCGTTTGCTA
Locus tag: YPTS_3717
YPTS_3717 -323 4.1 AGGTAATCGTTTGCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: pyrB
Ortholog function: aspartate carbamoyltransferase catalytic subunit
Escherichia coli str. K-12 substr. MG1655 b4245 -92 3.7 AATAAACCGTTTGCGC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04657 -227 5.1 AGGCAAACGATTACCT
Enterobacter sp. 638 Ent638_0447 -137 3.9 GCTCAAGCGTGTTCGA
Erwinia amylovora ATCC 49946 EAM_3054 -285 4.5 AAGCAAACGATCACCT
Yersinia pestis KIM y0161 -322 4.1 AGGTAATCGTTTGCTA
Serratia proteamaculans 568 Spro_0545 -268 4 AGCCAATCGATTGCGA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0382 -289 4.7 AAGCAACCGATTGCGA
Edwardsiella tarda EIB202 ETAE_3125 -322 4.1 GGGTAACCGTTTGCGC
Proteus mirabilis HI4320 PMI3455 -235 4.8 AAGCAAACGCTTGCGT
Position: -73
Score: 5
Sequence: ACGGAAACGATTACGT
Locus tag: YPTS_3790
YPTS_3790 -73 5 ACGGAAACGATTACGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yjcD
Ortholog function: putative xanthine/uracil permease
Serratia proteamaculans 568 Spro_4431 -84 4 AAGCAAACGATACCCT
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